26R
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
O3' | C3' | sing | 1.43Å | 1.44Å | |
O4' | C4' | sing | 1.43Å | 1.44Å | |
C3' | C4' | sing | 1.53Å | 1.54Å | |
C3' | C2' | sing | 1.53Å | 1.56Å | |
C4' | C5' | sing | 1.53Å | 1.57Å | |
O2' | C2' | sing | 1.43Å | 1.45Å | |
C2' | C1' | sing | 1.53Å | 1.56Å | |
O6' | C6' | sing | 1.43Å | 1.43Å | |
C5' | C6' | sing | 1.53Å | 1.52Å | |
C5' | O5' | sing | 1.43Å | 1.43Å | |
C1' | O5' | sing | 1.43Å | 1.43Å | |
C1' | N1 | sing | 1.46Å | 1.46Å | |
N1 | C2 | sing | 1.35Å | 1.33Å | |
C2 | C4 | sing | 1.51Å | 1.56Å | |
C2 | O3 | doub | 1.21Å | 1.23Å | |
C4 | C6 | sing | 1.53Å | 1.55Å | |
C4 | C5 | sing | 1.53Å | 1.51Å | |
C6 | C7 | sing | 1.51Å | 1.42Å | |
C8 | C7 | doub | 1.38Å | 1.39Å | Aromatic |
C8 | C9 | sing | 1.38Å | 1.40Å | Aromatic |
C7 | C12 | sing | 1.38Å | 1.42Å | Aromatic |
C9 | C10 | doub | 1.38Å | 1.41Å | Aromatic |
C12 | C11 | doub | 1.38Å | 1.40Å | Aromatic |
C10 | C11 | sing | 1.38Å | 1.41Å | Aromatic |
C10 | C13 | sing | 1.51Å | 1.45Å | |
C13 | C14 | sing | 1.53Å | 1.54Å | |
C13 | C15 | sing | 1.53Å | 1.53Å | |
C14 | H1 | sing | 1.09Å | 1.10Å | |
C14 | H2 | sing | 1.09Å | 1.10Å | |
C14 | H3 | sing | 1.09Å | 1.10Å | |
C13 | H4 | sing | 1.09Å | 1.10Å | |
C15 | H5 | sing | 1.09Å | 1.10Å | |
C15 | H6 | sing | 1.09Å | 1.10Å | |
C15 | H7 | sing | 1.09Å | 1.10Å | |
C9 | H8 | sing | 1.08Å | 1.08Å | |
C8 | H9 | sing | 1.08Å | 1.08Å | |
C11 | H10 | sing | 1.08Å | 1.08Å | |
C12 | H11 | sing | 1.08Å | 1.08Å | |
C6 | H12 | sing | 1.09Å | 1.10Å | |
C6 | H13 | sing | 1.09Å | 1.10Å | |
C4 | H14 | sing | 1.09Å | 1.10Å | |
C5 | H15 | sing | 1.09Å | 1.10Å | |
C5 | H16 | sing | 1.09Å | 1.10Å | |
C5 | H17 | sing | 1.09Å | 1.10Å | |
N1 | H18 | sing | 0.97Å | 1.00Å | |
C1' | H19 | sing | 1.09Å | 1.10Å | |
C5' | H20 | sing | 1.09Å | 1.10Å | |
C6' | H21 | sing | 1.09Å | 1.10Å | |
C6' | H22 | sing | 1.09Å | 1.10Å | |
O6' | H23 | sing | 0.97Å | 0.95Å | |
C4' | H24 | sing | 1.09Å | 1.10Å | |
O4' | H25 | sing | 0.97Å | 0.95Å | |
C3' | H26 | sing | 1.09Å | 1.10Å | |
O3' | H27 | sing | 0.97Å | 0.95Å | |
C2' | H28 | sing | 1.09Å | 1.10Å | |
O2' | H29 | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
O3' | C3' | C4' | 110.3° | 109.6° |
O3' | C3' | C2' | 109.8° | 109.5° |
O3' | C3' | H26 | 110.3° | 109.7° |
C3' | O3' | H27 | 109.5° | 114.0° |
O4' | C4' | C3' | 109.0° | 109.5° |
O4' | C4' | C5' | 111.0° | 109.6° |
O4' | C4' | H24 | 109.3° | 109.5° |
C4' | O4' | H25 | 109.5° | 114.0° |
C4' | C3' | C2' | 108.8° | 109.0° |
C3' | C4' | C5' | 111.9° | 109.2° |
C3' | C4' | H24 | 108.0° | 109.5° |
C4' | C3' | H26 | 109.0° | 109.5° |
C3' | C2' | O2' | 111.4° | 109.5° |
C3' | C2' | C1' | 109.5° | 109.2° |
C2' | C3' | H26 | 108.7° | 109.6° |
C3' | C2' | H28 | 108.1° | 109.6° |
C4' | C5' | C6' | 112.7° | 109.4° |
C4' | C5' | O5' | 110.6° | 109.5° |
C4' | C5' | H20 | 107.9° | 109.5° |
C5' | C4' | H24 | 107.6° | 109.5° |
O2' | C2' | C1' | 110.2° | 109.5° |
O2' | C2' | H28 | 109.5° | 109.5° |
C2' | O2' | H29 | 109.5° | 114.0° |
C2' | C1' | O5' | 110.2° | 109.4° |
C2' | C1' | N1 | 107.2° | 109.5° |
C2' | C1' | H19 | 108.5° | 109.5° |
C1' | C2' | H28 | 108.1° | 109.5° |
O6' | C6' | C5' | 106.1° | 109.5° |
O6' | C6' | H21 | 110.3° | 109.4° |
O6' | C6' | H22 | 110.3° | 109.5° |
C6' | O6' | H23 | 109.5° | 114.0° |
C6' | C5' | O5' | 107.5° | 109.5° |
C6' | C5' | H20 | 108.5° | 109.5° |
C5' | C6' | H21 | 110.3° | 109.5° |
C5' | C6' | H22 | 110.3° | 109.5° |
C5' | O5' | C1' | 109.4° | 114.1° |
O5' | C5' | H20 | 109.7° | 109.5° |
O5' | C1' | N1 | 110.6° | 109.5° |
O5' | C1' | H19 | 110.2° | 109.5° |
C1' | N1 | C2 | 122.2° | 120.0° |
C1' | N1 | H18 | 118.9° | 120.0° |
N1 | C1' | H19 | 109.9° | 109.5° |
N1 | C2 | C4 | 113.2° | 120.0° |
N1 | C2 | O3 | 122.6° | 120.0° |
C2 | N1 | H18 | 118.9° | 120.0° |
C4 | C2 | O3 | 124.1° | 120.0° |
C2 | C4 | C6 | 110.6° | 109.5° |
C2 | C4 | C5 | 110.4° | 109.4° |
C2 | C4 | H14 | 108.0° | 109.5° |
C6 | C4 | C5 | 111.0° | 109.5° |
C4 | C6 | C7 | 114.8° | 109.4° |
C4 | C6 | H12 | 108.1° | 109.5° |
C4 | C6 | H13 | 108.1° | 109.4° |
C6 | C4 | H14 | 108.1° | 109.5° |
C5 | C4 | H14 | 108.6° | 109.4° |
C4 | C5 | H15 | 109.5° | 109.4° |
C4 | C5 | H16 | 109.5° | 109.5° |
C4 | C5 | H17 | 109.5° | 109.4° |
C6 | C7 | C8 | 118.2° | 120.0° |
C6 | C7 | C12 | 122.1° | 120.0° |
C7 | C6 | H12 | 108.1° | 109.4° |
C7 | C6 | H13 | 108.1° | 109.5° |
C7 | C8 | C9 | 119.6° | 120.0° |
C8 | C7 | C12 | 119.7° | 120.0° |
C7 | C8 | H9 | 120.2° | 120.0° |
C8 | C9 | C10 | 122.0° | 119.9° |
C8 | C9 | H8 | 119.0° | 120.0° |
C9 | C8 | H9 | 120.2° | 120.0° |
C7 | C12 | C11 | 120.2° | 120.0° |
C7 | C12 | H11 | 119.9° | 120.0° |
C9 | C10 | C11 | 118.1° | 120.0° |
C9 | C10 | C13 | 118.1° | 120.0° |
C10 | C9 | H8 | 119.0° | 120.0° |
C12 | C11 | C10 | 120.4° | 120.0° |
C12 | C11 | H10 | 119.8° | 120.0° |
C11 | C12 | H11 | 119.9° | 119.9° |
C11 | C10 | C13 | 123.8° | 120.0° |
C10 | C11 | H10 | 119.8° | 120.0° |
C10 | C13 | C14 | 113.1° | 109.4° |
C10 | C13 | C15 | 111.3° | 109.5° |
C10 | C13 | H4 | 108.4° | 109.4° |
C14 | C13 | C15 | 108.9° | 109.4° |
C13 | C14 | H1 | 109.5° | 109.5° |
C13 | C14 | H2 | 109.5° | 109.4° |
C13 | C14 | H3 | 109.5° | 109.5° |
C14 | C13 | H4 | 107.4° | 109.5° |
C15 | C13 | H4 | 107.5° | 109.5° |
C13 | C15 | H5 | 109.5° | 109.5° |
C13 | C15 | H6 | 109.5° | 109.4° |
C13 | C15 | H7 | 109.5° | 109.4° |
H1 | C14 | H2 | 109.4° | 109.5° |
H1 | C14 | H3 | 109.5° | 109.5° |
H2 | C14 | H3 | 109.5° | 109.5° |
H5 | C15 | H6 | 109.5° | 109.5° |
H5 | C15 | H7 | 109.5° | 109.5° |
H6 | C15 | H7 | 109.5° | 109.5° |
H12 | C6 | H13 | 109.5° | 109.5° |
H15 | C5 | H16 | 109.5° | 109.5° |
H15 | C5 | H17 | 109.5° | 109.4° |
H16 | C5 | H17 | 109.4° | 109.5° |
H21 | C6' | H22 | 109.5° | 109.5° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
O3' | C3' | C4' | O4' | 67.0° | 63.3° |
O3' | C3' | C4' | C2' | 120.4° | 119.8° |
O3' | C3' | C4' | H26 | 121.2° | 120.3° |
O3' | C3' | C2' | H26 | 120.7° | 120.3° |
O3' | C3' | C4' | C5' | 169.9° | 176.8° |
O3' | C3' | C2' | O2' | 65.4° | 63.3° |
O3' | C3' | C2' | C1' | 172.4° | 176.8° |
O3' | C3' | C4' | H24 | 51.6° | 56.9° |
O3' | C3' | C2' | H28 | 54.9° | 56.9° |
O4' | C4' | C3' | C5' | 123.1° | 120.0° |
O4' | C4' | C3' | H24 | 118.6° | 120.1° |
O4' | C4' | C3' | C2' | 172.6° | 176.9° |
O4' | C4' | C5' | H24 | 119.5° | 120.2° |
O4' | C4' | C5' | C6' | 62.0° | 62.4° |
O4' | C4' | C5' | O5' | 177.7° | 177.6° |
O4' | C4' | C5' | H20 | 57.8° | 57.5° |
O4' | C4' | C3' | H26 | 54.2° | 57.1° |
C4' | C3' | C2' | H26 | 118.6° | 119.9° |
C3' | C4' | C5' | H24 | 118.5° | 119.9° |
C4' | C3' | C2' | O2' | 173.8° | 176.9° |
C4' | C3' | C2' | C1' | 51.6° | 57.0° |
C3' | C4' | C5' | C6' | 176.1° | 177.6° |
C3' | C4' | C5' | O5' | 55.8° | 57.6° |
C3' | C4' | C5' | H20 | 64.2° | 62.4° |
C3' | C4' | O4' | H25 | 180.0° | 60.3° |
C4' | C3' | O3' | H27 | 180.0° | 180.0° |
C4' | C3' | C2' | H28 | 65.9° | 62.9° |
C2' | C3' | C4' | C5' | 49.5° | 57.0° |
C3' | C2' | O2' | C1' | 121.8° | 119.7° |
C3' | C2' | O2' | H28 | 119.4° | 120.2° |
C3' | C2' | C1' | H28 | 117.5° | 120.0° |
C3' | C2' | C1' | O5' | 61.1° | 57.6° |
C3' | C2' | C1' | N1 | 178.4° | 177.6° |
C3' | C2' | C1' | H19 | 59.7° | 62.4° |
C2' | C3' | C4' | H24 | 68.8° | 62.9° |
C2' | C3' | O3' | H27 | 60.1° | 60.5° |
C3' | C2' | O2' | H29 | 180.0° | 179.9° |
C4' | C5' | C6' | O6' | 50.9° | 175.0° |
C4' | C5' | C6' | O5' | 122.1° | 120.0° |
C4' | C5' | C6' | H20 | 119.4° | 120.0° |
C4' | C5' | O5' | H20 | 118.9° | 120.0° |
C4' | C5' | O5' | C1' | 63.4° | 61.1° |
C4' | C5' | C6' | H21 | 68.6° | 55.1° |
C4' | C5' | C6' | H22 | 170.4° | 65.0° |
C5' | C4' | O4' | H25 | 56.4° | 180.0° |
C5' | C4' | C3' | H26 | 68.9° | 62.9° |
O2' | C2' | C1' | H28 | 119.6° | 120.2° |
O2' | C2' | C1' | O5' | 176.0° | 177.5° |
O2' | C2' | C1' | N1 | 55.5° | 62.5° |
O2' | C2' | C1' | H19 | 63.2° | 57.5° |
O2' | C2' | C3' | H26 | 55.3° | 57.0° |
C2' | C1' | O5' | C5' | 67.0° | 61.1° |
C2' | C1' | O5' | N1 | 118.4° | 120.0° |
C2' | C1' | O5' | H19 | 119.8° | 120.0° |
C2' | C1' | N1 | H19 | 117.8° | 120.0° |
C2' | C1' | N1 | C2 | 142.0° | 145.1° |
C2' | C1' | N1 | H18 | 38.0° | 34.9° |
C1' | C2' | C3' | H26 | 66.9° | 62.9° |
C1' | C2' | O2' | H29 | 58.2° | 60.3° |
O6' | C6' | C5' | H21 | 119.5° | 119.9° |
O6' | C6' | C5' | H22 | 119.5° | 120.0° |
O6' | C6' | C5' | O5' | 71.2° | 65.0° |
O6' | C6' | C5' | H20 | 170.3° | 55.0° |
O6' | C6' | H21 | H22 | 121.6° | 120.0° |
C6' | C5' | O5' | H20 | 117.8° | 120.0° |
C6' | C5' | O5' | C1' | 173.2° | 178.9° |
C5' | C6' | H21 | H22 | 121.5° | 120.0° |
C5' | C6' | O6' | H23 | 180.0° | 180.0° |
C6' | C5' | C4' | H24 | 57.5° | 57.7° |
C5' | O5' | C1' | N1 | 174.6° | 178.9° |
C5' | O5' | C1' | H19 | 52.8° | 58.9° |
O5' | C5' | C6' | H21 | 169.3° | 175.1° |
O5' | C5' | C6' | H22 | 48.3° | 55.0° |
O5' | C5' | C4' | H24 | 62.8° | 62.3° |
O5' | C1' | N1 | H19 | 122.0° | 120.0° |
O5' | C1' | N1 | C2 | 97.8° | 94.9° |
O5' | C1' | N1 | H18 | 82.2° | 85.0° |
C1' | O5' | C5' | H20 | 55.4° | 58.9° |
O5' | C1' | C2' | H28 | 56.4° | 62.3° |
C1' | N1 | C2 | H18 | 180.0° | 180.0° |
C1' | N1 | C2 | C4 | 175.8° | 180.0° |
C1' | N1 | C2 | O3 | 1.7° | 0.1° |
N1 | C1' | C2' | H28 | 64.1° | 57.7° |
N1 | C2 | C4 | O3 | 177.5° | 179.9° |
N1 | C2 | C4 | C6 | 142.0° | 180.0° |
N1 | C2 | C4 | C5 | 94.7° | 60.0° |
N1 | C2 | C4 | H14 | 23.9° | 59.9° |
C2 | N1 | C1' | H19 | 24.2° | 25.1° |
C2 | C4 | C6 | C5 | 122.9° | 119.9° |
C2 | C4 | C6 | H14 | 118.1° | 120.1° |
C2 | C4 | C5 | H14 | 118.3° | 120.0° |
C2 | C4 | C6 | C7 | 164.1° | 175.0° |
C2 | C4 | C6 | H12 | 75.1° | 65.0° |
C2 | C4 | C6 | H13 | 43.3° | 55.1° |
C2 | C4 | C5 | H15 | 180.0° | 60.0° |
C2 | C4 | C5 | H16 | 60.0° | 60.0° |
C2 | C4 | C5 | H17 | 60.0° | 179.9° |
C4 | C2 | N1 | H18 | 4.1° | 0.1° |
O3 | C2 | C4 | C6 | 35.4° | 0.1° |
O3 | C2 | C4 | C5 | 87.8° | 120.1° |
O3 | C2 | C4 | H14 | 153.6° | 120.0° |
O3 | C2 | N1 | H18 | 178.3° | 179.9° |
C6 | C4 | C5 | H14 | 118.7° | 120.1° |
C4 | C6 | C7 | H12 | 120.7° | 120.0° |
C4 | C6 | C7 | H13 | 120.8° | 119.9° |
C4 | C6 | C7 | C8 | 91.6° | 90.0° |
C4 | C6 | C7 | C12 | 89.8° | 90.3° |
C4 | C6 | H12 | H13 | 117.5° | 120.0° |
C6 | C4 | C5 | H15 | 57.0° | 59.9° |
C6 | C4 | C5 | H16 | 63.1° | 180.0° |
C6 | C4 | C5 | H17 | 177.0° | 60.0° |
C5 | C4 | C6 | C7 | 41.2° | 65.0° |
C5 | C4 | C6 | H12 | 161.9° | 54.9° |
C5 | C4 | C6 | H13 | 79.6° | 175.0° |
C4 | C5 | H15 | H16 | 120.0° | 120.1° |
C4 | C5 | H15 | H17 | 120.0° | 119.9° |
C4 | C5 | H16 | H17 | 120.0° | 120.0° |
C6 | C7 | C8 | C12 | 178.7° | 179.8° |
C6 | C7 | C8 | C9 | 179.1° | 180.0° |
C6 | C7 | C12 | C11 | 179.7° | 179.8° |
C6 | C7 | C8 | H9 | 1.0° | 0.0° |
C6 | C7 | C12 | H11 | 0.3° | 0.3° |
C7 | C6 | H12 | H13 | 117.6° | 120.0° |
C7 | C6 | C4 | H14 | 77.8° | 55.0° |
C7 | C8 | C9 | H9 | 180.0° | 180.0° |
C7 | C8 | C9 | C10 | 0.3° | 0.0° |
C8 | C7 | C12 | C11 | 1.1° | 0.4° |
C7 | C8 | C9 | H8 | 179.7° | 180.0° |
C8 | C7 | C12 | H11 | 179.0° | 179.9° |
C8 | C7 | C6 | H12 | 29.1° | 150.0° |
C8 | C7 | C6 | H13 | 147.6° | 30.0° |
C9 | C8 | C7 | C12 | 0.4° | 0.2° |
C8 | C9 | C10 | H8 | 180.0° | 180.0° |
C8 | C9 | C10 | C11 | 0.4° | 0.0° |
C8 | C9 | C10 | C13 | 179.4° | 179.8° |
C7 | C12 | C11 | H11 | 180.0° | 179.5° |
C7 | C12 | C11 | C10 | 1.0° | 0.4° |
C12 | C7 | C8 | H9 | 179.6° | 179.7° |
C7 | C12 | C11 | H10 | 179.0° | 179.5° |
C12 | C7 | C6 | H12 | 149.5° | 29.7° |
C12 | C7 | C6 | H13 | 31.0° | 149.8° |
C9 | C10 | C11 | C12 | 0.3° | 0.2° |
C9 | C10 | C11 | C13 | 179.8° | 179.8° |
C9 | C10 | C13 | C14 | 130.7° | 59.7° |
C9 | C10 | C13 | C15 | 106.3° | 60.2° |
C9 | C10 | C13 | H4 | 11.7° | 179.7° |
C10 | C9 | C8 | H9 | 179.6° | 180.0° |
C9 | C10 | C11 | H10 | 179.7° | 179.7° |
C12 | C11 | C10 | H10 | 180.0° | 179.9° |
C12 | C11 | C10 | C13 | 179.9° | 180.0° |
C11 | C10 | C13 | C14 | 49.1° | 120.0° |
C11 | C10 | C13 | C15 | 73.9° | 120.0° |
C11 | C10 | C13 | H4 | 168.1° | 0.1° |
C11 | C10 | C9 | H8 | 179.6° | 180.0° |
C10 | C11 | C12 | H11 | 179.0° | 179.9° |
C10 | C13 | C14 | C15 | 124.4° | 120.0° |
C10 | C13 | C14 | H4 | 119.6° | 120.0° |
C10 | C13 | C15 | H4 | 118.6° | 120.0° |
C10 | C13 | C14 | H1 | 180.0° | 60.0° |
C10 | C13 | C14 | H2 | 60.0° | 180.0° |
C10 | C13 | C14 | H3 | 60.0° | 60.0° |
C10 | C13 | C15 | H5 | 180.0° | 60.0° |
C10 | C13 | C15 | H6 | 60.0° | 60.1° |
C10 | C13 | C15 | H7 | 60.0° | 180.0° |
C13 | C10 | C9 | H8 | 0.6° | 0.2° |
C13 | C10 | C11 | H10 | 0.1° | 0.1° |
C14 | C13 | C15 | H4 | 116.0° | 120.0° |
C13 | C14 | H1 | H2 | 120.0° | 120.0° |
C13 | C14 | H1 | H3 | 120.0° | 120.0° |
C13 | C14 | H2 | H3 | 120.0° | 119.9° |
C14 | C13 | C15 | H5 | 54.6° | 60.0° |
C14 | C13 | C15 | H6 | 174.6° | 180.0° |
C14 | C13 | C15 | H7 | 65.4° | 60.1° |
C15 | C13 | C14 | H1 | 55.6° | 60.0° |
C15 | C13 | C14 | H2 | 64.4° | 60.1° |
C15 | C13 | C14 | H3 | 175.7° | 180.0° |
C13 | C15 | H5 | H6 | 120.0° | 120.0° |
C13 | C15 | H5 | H7 | 120.0° | 120.0° |
C13 | C15 | H6 | H7 | 120.0° | 119.9° |
H1 | C14 | H2 | H3 | 120.0° | 120.1° |
H1 | C14 | C13 | H4 | 60.4° | 179.9° |
H2 | C14 | C13 | H4 | 179.6° | 60.0° |
H3 | C14 | C13 | H4 | 59.6° | 59.9° |
H4 | C13 | C15 | H5 | 61.4° | 180.0° |
H4 | C13 | C15 | H6 | 58.6° | 59.9° |
H4 | C13 | C15 | H7 | 178.6° | 60.0° |
H5 | C15 | H6 | H7 | 120.0° | 120.1° |
H8 | C9 | C8 | H9 | 0.3° | 0.0° |
H10 | C11 | C12 | H11 | 1.0° | 0.0° |
H12 | C6 | C4 | H14 | 42.9° | 174.9° |
H13 | C6 | C4 | H14 | 161.4° | 65.0° |
H14 | C4 | C5 | H15 | 61.7° | 180.0° |
H14 | C4 | C5 | H16 | 178.2° | 60.0° |
H14 | C4 | C5 | H17 | 58.3° | 60.1° |
H15 | C5 | H16 | H17 | 120.0° | 120.0° |
H18 | N1 | C1' | H19 | 155.8° | 154.9° |
H19 | C1' | C2' | H28 | 177.2° | 177.7° |
H20 | C5' | C6' | H21 | 50.8° | 64.9° |
H20 | C5' | C6' | H22 | 70.2° | 175.1° |
H20 | C5' | C4' | H24 | 177.3° | 177.7° |
H21 | C6' | O6' | H23 | 60.6° | 60.0° |
H22 | C6' | O6' | H23 | 60.5° | 60.0° |
H24 | C4' | O4' | H25 | 62.2° | 59.8° |
H24 | C4' | C3' | H26 | 172.8° | 177.2° |
H26 | C3' | O3' | H27 | 59.6° | 59.7° |
H26 | C3' | C2' | H28 | 175.6° | 177.2° |
H28 | C2' | O2' | H29 | 60.5° | 59.9° |