23G

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
P	O5'	sing	1.61Å	1.41Å
P	OP1	doub	1.48Å	1.40Å
P	OP2	sing	1.61Å	1.44Å
N1	C2	sing	1.36Å	1.37Å
N1	C6	sing	1.35Å	1.38Å
N1	HN1	sing	0.97Å	1.00Å
C2	N2	sing	1.37Å	1.27Å
C2	N3	doub	1.31Å	1.33Å
N2	HN2	sing	0.97Å	1.00Å
N2	HN2A	sing	0.97Å	1.00Å
N3	C4	sing	1.34Å	1.33Å
C4	C5	doub	1.40Å	1.38Å	Aromatic
C4	N9	sing	1.37Å	1.32Å	Aromatic
C5	C6	sing	1.41Å	1.39Å
C5	N7	sing	1.36Å	1.30Å	Aromatic
C6	O6	doub	1.22Å	1.22Å
N7	C8	doub	1.30Å	1.31Å	Aromatic
C8	N9	sing	1.37Å	1.31Å	Aromatic
C8	H8	sing	1.08Å	1.08Å
N9	C1'	sing	1.47Å	1.50Å
PC	O2'	sing	1.63Å	1.55Å
PC	O3'	sing	1.63Å	1.51Å
PC	OC1	sing	1.61Å	1.51Å
PC	OC2	doub	1.48Å	1.49Å
C1'	C2'	sing	1.54Å	1.55Å
C1'	O4'	sing	1.44Å	1.46Å
C1'	H1'	sing	1.09Å	1.10Å
C2'	O2'	sing	1.45Å	1.43Å
C2'	C3'	sing	1.55Å	1.53Å
C2'	H2'	sing	1.09Å	1.10Å
C3'	O3'	sing	1.43Å	1.47Å
C3'	C4'	sing	1.55Å	1.55Å
C3'	H3'	sing	1.09Å	1.10Å
C4'	O4'	sing	1.44Å	1.41Å
C4'	C5'	sing	1.53Å	1.48Å
C4'	H4'	sing	1.09Å	1.10Å
C5'	O5'	sing	1.43Å	1.35Å
C5'	H5'	sing	1.09Å	1.10Å
C5'	H5'A	sing	1.09Å	1.10Å
P	OP3	sing	1.61Å	1.72Å
OC1	H11	sing	0.97Å	0.95Å
OP2	HOP2	sing	0.97Å	0.95Å
OP3	HOP3	sing	0.97Å	0.95Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
O5'	P	OP1	106.7°	109.5°
O5'	P	OP2	109.8°	109.5°
P	O5'	C5'	118.0°	123.0°
O5'	P	OP3	109.7°	109.5°
OP1	P	OP2	106.8°	109.5°
OP1	P	OP3	112.2°	109.4°
OP2	P	OP3	111.5°	109.5°
P	OP2	HOP2	109.5°	113.9°
C2	N1	C6	115.7°	120.3°
C2	N1	HN1	122.1°	119.8°
N1	C2	N2	117.8°	119.0°
N1	C2	N3	123.8°	121.9°
C6	N1	HN1	122.1°	119.9°
N1	C6	C5	120.2°	118.3°
N1	C6	O6	119.4°	120.8°
N2	C2	N3	118.4°	119.1°
C2	N2	HN2	120.0°	120.1°
C2	N2	HN2A	120.0°	120.1°
C2	N3	C4	121.6°	121.2°
HN2	N2	HN2A	120.0°	119.9°
N3	C4	C5	117.9°	119.7°
N3	C4	N9	133.7°	134.2°
C5	C4	N9	108.4°	106.1°
C4	C5	C6	120.7°	118.6°
C4	C5	N7	106.2°	107.3°
C4	N9	C8	106.0°	107.4°
C4	N9	C1'	129.5°	126.3°
C6	C5	N7	133.1°	134.1°
C5	C6	O6	120.4°	120.8°
C5	N7	C8	108.5°	109.3°
N7	C8	N9	110.9°	109.8°
N7	C8	H8	124.6°	125.1°
N9	C8	H8	124.5°	125.1°
C8	N9	C1'	124.4°	126.3°
N9	C1'	C2'	122.2°	109.8°
N9	C1'	O4'	104.2°	109.8°
N9	C1'	H1'	103.3°	109.8°
O2'	PC	O3'	106.9°	102.2°
O2'	PC	OC1	113.9°	110.9°
O2'	PC	OC2	109.8°	110.9°
PC	O2'	C2'	108.2°	101.8°
O3'	PC	OC1	104.4°	110.9°
O3'	PC	OC2	117.2°	110.9°
PC	O3'	C3'	101.7°	105.1°
OC1	PC	OC2	104.9°	110.8°
PC	OC1	H11	109.5°	114.0°
C2'	C1'	O4'	105.0°	107.4°
C2'	C1'	H1'	102.4°	109.9°
C1'	C2'	O2'	114.9°	107.7°
C1'	C2'	C3'	102.6°	103.9°
C1'	C2'	H2'	108.7°	112.3°
O4'	C1'	H1'	121.0°	110.0°
C1'	O4'	C4'	109.5°	106.9°
O2'	C2'	C3'	103.0°	107.3°
O2'	C2'	H2'	108.3°	112.3°
C3'	C2'	H2'	119.6°	112.8°
C2'	C3'	O3'	108.6°	110.3°
C2'	C3'	C4'	100.2°	102.4°
C2'	C3'	H3'	118.3°	111.2°
O3'	C3'	C4'	116.0°	109.8°
O3'	C3'	H3'	103.1°	111.1°
C4'	C3'	H3'	111.2°	111.7°
C3'	C4'	O4'	108.4°	103.5°
C3'	C4'	C5'	103.2°	110.6°
C3'	C4'	H4'	112.2°	110.6°
O4'	C4'	C5'	103.2°	110.6°
O4'	C4'	H4'	112.2°	110.7°
C5'	C4'	H4'	116.8°	110.6°
C4'	C5'	O5'	110.8°	109.5°
C4'	C5'	H5'	109.0°	109.5°
C4'	C5'	H5'A	109.0°	109.4°
O5'	C5'	H5'	109.0°	109.5°
O5'	C5'	H5'A	109.0°	109.5°
H5'	C5'	H5'A	109.9°	109.5°
P	OP3	HOP3	109.5°	114.0°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
O5'	P	OP1	OP2	117.4°	120.0°
O5'	P	OP1	OP3	120.2°	120.0°
O5'	P	OP2	OP3	121.7°	120.0°
P	O5'	C5'	C4'	139.8°	180.0°
P	O5'	C5'	H5'	100.2°	60.0°
P	O5'	C5'	H5'A	19.8°	60.0°
O5'	P	OP2	HOP2	115.3°	60.0°
O5'	P	OP3	HOP3	118.4°	180.0°
OP1	P	OP2	OP3	122.9°	120.0°
OP1	P	O5'	C5'	130.9°	55.0°
OP1	P	OP2	HOP2	0.0°	180.0°
OP1	P	OP3	HOP3	0.0°	60.0°
OP2	P	O5'	C5'	113.8°	65.0°
OP2	P	OP3	HOP3	119.8°	60.0°
C2	N1	C6	HN1	180.0°	179.7°
N1	C2	N2	N3	179.0°	180.0°
N1	C2	N2	HN2	179.0°	0.1°
N1	C2	N2	HN2A	1.0°	180.0°
N1	C2	N3	C4	0.5°	0.0°
C2	N1	C6	C5	0.1°	0.0°
C2	N1	C6	O6	179.9°	180.0°
C6	N1	C2	N2	178.9°	180.0°
C6	N1	C2	N3	0.0°	0.0°
N1	C6	C5	C4	0.4°	0.1°
N1	C6	C5	O6	179.8°	180.0°
N1	C6	C5	N7	178.6°	180.0°
HN1	N1	C2	N2	1.1°	0.3°
HN1	N1	C2	N3	180.0°	179.7°
HN1	N1	C6	C5	179.9°	179.7°
HN1	N1	C6	O6	0.1°	0.2°
C2	N2	HN2	HN2A	180.0°	179.9°
N2	C2	N3	C4	179.4°	180.0°
N3	C2	N2	HN2	0.0°	180.0°
N3	C2	N2	HN2A	180.0°	0.0°
C2	N3	C4	C5	1.0°	0.1°
C2	N3	C4	N9	178.9°	180.0°
N3	C4	C5	N9	179.9°	180.0°
N3	C4	C5	C6	0.9°	0.1°
N3	C4	C5	N7	179.6°	180.0°
N3	C4	N9	C8	179.9°	180.0°
N3	C4	N9	C1'	2.2°	0.0°
C4	C5	C6	N7	178.3°	179.9°
C4	C5	C6	O6	179.5°	180.0°
C4	C5	N7	C8	0.8°	0.0°
C5	C4	N9	C8	0.3°	0.0°
C5	C4	N9	C1'	178.0°	180.0°
N9	C4	C5	C6	179.0°	180.0°
N9	C4	C5	N7	0.3°	0.0°
C4	N9	C8	N7	0.8°	0.0°
C4	N9	C8	C1'	177.8°	180.0°
C4	N9	C8	H8	179.2°	180.0°
C4	N9	C1'	C2'	30.3°	85.0°
C4	N9	C1'	O4'	88.1°	157.1°
C4	N9	C1'	H1'	144.6°	36.0°
C6	C5	N7	C8	179.2°	179.9°
N7	C5	C6	O6	1.2°	0.1°
C5	N7	C8	N9	1.0°	0.0°
C5	N7	C8	H8	179.0°	180.0°
N7	C8	N9	H8	180.0°	180.0°
N7	C8	N9	C1'	178.6°	180.0°
C8	N9	C1'	C2'	152.4°	95.0°
C8	N9	C1'	O4'	89.2°	22.9°
C8	N9	C1'	H1'	38.1°	144.0°
H8	C8	N9	C1'	1.4°	0.0°
N9	C1'	C2'	O4'	118.0°	119.4°
N9	C1'	C2'	H1'	114.7°	121.0°
N9	C1'	O4'	H1'	115.4°	121.0°
N9	C1'	C2'	O2'	98.6°	124.9°
N9	C1'	C2'	C3'	150.4°	121.5°
N9	C1'	C2'	H2'	22.9°	0.7°
N9	C1'	O4'	C4'	143.6°	145.9°
O2'	PC	O3'	OC1	121.0°	118.2°
O2'	PC	O3'	OC2	123.6°	118.2°
O2'	PC	OC1	OC2	120.0°	123.6°
PC	O2'	C2'	C1'	91.4°	146.7°
PC	O2'	C2'	C3'	19.3°	35.3°
PC	O2'	C2'	H2'	146.9°	89.1°
O2'	PC	O3'	C3'	20.2°	20.8°
O2'	PC	OC1	H11	120.0°	60.0°
O3'	PC	OC1	OC2	123.8°	123.6°
O3'	PC	O2'	C2'	0.1°	34.4°
PC	O3'	C3'	C2'	33.1°	0.3°
PC	O3'	C3'	C4'	145.1°	112.4°
PC	O3'	C3'	H3'	93.1°	123.5°
O3'	PC	OC1	H11	123.8°	172.8°
OC1	PC	O2'	C2'	114.6°	83.8°
OC1	PC	O3'	C3'	100.8°	97.4°
OC2	PC	O2'	C2'	128.2°	152.6°
OC2	PC	O3'	C3'	143.8°	139.0°
OC2	PC	OC1	H11	0.0°	63.6°
C2'	C1'	O4'	H1'	115.0°	119.6°
C1'	C2'	O2'	C3'	110.7°	111.3°
C1'	C2'	O2'	H2'	121.7°	124.2°
C1'	C2'	C3'	H2'	120.3°	121.9°
C1'	C2'	C3'	O3'	85.7°	137.6°
C1'	C2'	C3'	C4'	36.4°	20.8°
C1'	C2'	C3'	H3'	157.3°	98.6°
C2'	C1'	O4'	C4'	14.0°	26.5°
O4'	C1'	C2'	O2'	143.3°	115.7°
O4'	C1'	C2'	C3'	32.4°	2.1°
O4'	C1'	C2'	H2'	95.2°	120.1°
C1'	O4'	C4'	C3'	10.0°	39.9°
C1'	O4'	C4'	C5'	99.0°	158.4°
C1'	O4'	C4'	H4'	134.5°	78.6°
H1'	C1'	C2'	O2'	16.1°	3.9°
H1'	C1'	C2'	C3'	94.9°	117.5°
H1'	C1'	C2'	H2'	137.5°	120.3°
H1'	C1'	O4'	C4'	101.0°	93.1°
O2'	C2'	C3'	H2'	120.1°	124.2°
O2'	C2'	C3'	O3'	33.9°	23.7°
O2'	C2'	C3'	C4'	156.0°	93.2°
O2'	C2'	C3'	H3'	83.1°	147.4°
C2'	C3'	O3'	C4'	111.9°	112.1°
C2'	C3'	O3'	H3'	126.3°	123.8°
C2'	C3'	C4'	H3'	125.9°	119.1°
C2'	C3'	C4'	O4'	29.8°	36.9°
C2'	C3'	C4'	C5'	79.2°	155.4°
C2'	C3'	C4'	H4'	154.3°	81.6°
H2'	C2'	C3'	O3'	154.0°	100.5°
H2'	C2'	C3'	C4'	83.9°	142.7°
H2'	C2'	C3'	H3'	37.0°	23.3°
O3'	C3'	C4'	H3'	117.4°	123.8°
O3'	C3'	C4'	O4'	86.9°	154.1°
O3'	C3'	C4'	C5'	164.1°	87.4°
O3'	C3'	C4'	H4'	37.6°	35.5°
C3'	C4'	O4'	C5'	109.0°	118.5°
C3'	C4'	O4'	H4'	124.5°	118.6°
C3'	C4'	C5'	H4'	123.6°	122.9°
C3'	C4'	C5'	O5'	125.8°	175.0°
C3'	C4'	C5'	H5'	5.9°	55.0°
C3'	C4'	C5'	H5'A	114.1°	65.0°
H3'	C3'	C4'	O4'	155.6°	82.2°
H3'	C3'	C4'	C5'	46.7°	36.3°
H3'	C3'	C4'	H4'	79.9°	159.3°
O4'	C4'	C5'	H4'	123.6°	123.0°
O4'	C4'	C5'	O5'	121.3°	70.9°
O4'	C4'	C5'	H5'	118.7°	169.1°
O4'	C4'	C5'	H5'A	1.3°	49.1°
C4'	C5'	O5'	H5'	120.0°	120.0°
C4'	C5'	O5'	H5'A	120.0°	120.0°
C4'	C5'	H5'	H5'A	119.5°	120.0°
H4'	C4'	C5'	O5'	2.3°	52.1°
H4'	C4'	C5'	H5'	117.7°	68.0°
H4'	C4'	C5'	H5'A	122.3°	172.1°
O5'	C5'	H5'	H5'A	119.4°	120.0°
C5'	O5'	P	OP3	9.0°	175.0°
OP3	P	OP2	HOP2	122.9°	60.0°

Definition date:	2009-09-09
Last modified:	2011-06-04
Release status:	REL
Processing site:	RCSB
Derived from:	3IVN