1ZB
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
N | CA | sing | 1.47Å | 1.50Å | |
N | H | sing | 1.01Å | 1.00Å | |
N | H2 | sing | 1.01Å | 1.00Å | |
CA | C | sing | 1.51Å | 1.53Å | |
CA | HA2 | sing | 1.09Å | 1.10Å | |
CA | HA3 | sing | 1.09Å | 1.10Å | |
C | O | doub | 1.21Å | 1.22Å | |
C | N1 | sing | 1.35Å | 1.34Å | |
N1 | CA1 | sing | 1.47Å | 1.48Å | |
N1 | H1 | sing | 0.97Å | 1.00Å | |
CA1 | C1 | sing | 1.51Å | 1.51Å | |
CA1 | CB | sing | 1.53Å | 1.53Å | |
CA1 | HA | sing | 1.09Å | 1.10Å | |
C1 | O1 | doub | 1.22Å | 1.22Å | |
C1 | C2 | sing | 1.39Å | 1.50Å | |
CB | CG | sing | 1.51Å | 1.51Å | |
CB | HB2 | sing | 1.09Å | 1.10Å | |
CB | HB3 | sing | 1.09Å | 1.10Å | |
CG | CD1 | doub | 1.38Å | 1.40Å | Aromatic |
CG | CD2 | sing | 1.38Å | 1.40Å | Aromatic |
CD1 | CE1 | sing | 1.38Å | 1.42Å | Aromatic |
CD1 | HD1 | sing | 1.08Å | 1.08Å | |
CD2 | CE2 | doub | 1.38Å | 1.41Å | Aromatic |
CD2 | HD2 | sing | 1.08Å | 1.08Å | |
CE1 | CZ | doub | 1.38Å | 1.39Å | Aromatic |
CE1 | HE1 | sing | 1.08Å | 1.08Å | |
CE2 | CZ | sing | 1.38Å | 1.41Å | Aromatic |
CE2 | HE2 | sing | 1.08Å | 1.08Å | |
CZ | HZ | sing | 1.08Å | 1.08Å | |
C2 | H11 | sing | 1.08Å | 1.08Å | |
C2 | N3 | doub | 1.25Å | 1.47Å | |
N3 | N4 | doub | 1.12Å | 1.45Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
CA | N | H | 109.5° | 111.0° |
CA | N | H2 | 109.5° | 111.0° |
N | CA | C | 113.4° | 109.5° |
N | CA | HA2 | 108.2° | 109.5° |
N | CA | HA3 | 108.2° | 109.4° |
H | N | H2 | 109.4° | 110.9° |
C | CA | HA2 | 108.2° | 109.5° |
C | CA | HA3 | 108.2° | 109.4° |
CA | C | O | 120.3° | 120.0° |
CA | C | N1 | 116.0° | 120.0° |
HA2 | CA | HA3 | 110.8° | 109.5° |
O | C | N1 | 123.7° | 120.0° |
C | N1 | CA1 | 124.3° | 119.9° |
C | N1 | H1 | 117.9° | 120.1° |
CA1 | N1 | H1 | 117.9° | 120.0° |
N1 | CA1 | C1 | 111.2° | 109.5° |
N1 | CA1 | CB | 110.1° | 109.4° |
N1 | CA1 | HA | 107.4° | 109.5° |
C1 | CA1 | CB | 108.2° | 109.5° |
C1 | CA1 | HA | 109.4° | 109.5° |
CA1 | C1 | O1 | 121.3° | 120.0° |
CA1 | C1 | C2 | 108.4° | 120.0° |
CB | CA1 | HA | 110.5° | 109.5° |
CA1 | CB | CG | 113.3° | 109.5° |
CA1 | CB | HB2 | 108.2° | 109.5° |
CA1 | CB | HB3 | 108.2° | 109.5° |
O1 | C1 | C2 | 130.0° | 120.0° |
C1 | C2 | H11 | 109.1° | 120.0° |
C1 | C2 | N3 | 141.8° | 120.0° |
CG | CB | HB2 | 108.2° | 109.4° |
CG | CB | HB3 | 108.2° | 109.5° |
CB | CG | CD1 | 120.5° | 120.0° |
CB | CG | CD2 | 120.6° | 120.0° |
HB2 | CB | HB3 | 110.7° | 109.4° |
CD1 | CG | CD2 | 118.9° | 120.0° |
CG | CD1 | CE1 | 120.9° | 120.0° |
CG | CD1 | HD1 | 119.6° | 120.0° |
CG | CD2 | CE2 | 120.5° | 120.0° |
CG | CD2 | HD2 | 119.7° | 120.0° |
CE1 | CD1 | HD1 | 119.6° | 120.0° |
CD1 | CE1 | CZ | 120.0° | 120.0° |
CD1 | CE1 | HE1 | 120.0° | 120.0° |
CE2 | CD2 | HD2 | 119.7° | 120.0° |
CD2 | CE2 | CZ | 120.2° | 120.0° |
CD2 | CE2 | HE2 | 119.9° | 120.0° |
CZ | CE1 | HE1 | 120.0° | 120.0° |
CE1 | CZ | CE2 | 119.6° | 120.0° |
CE1 | CZ | HZ | 120.2° | 120.0° |
CZ | CE2 | HE2 | 119.9° | 120.0° |
CE2 | CZ | HZ | 120.2° | 120.0° |
H11 | C2 | N3 | 109.1° | 120.0° |
C2 | N3 | N4 | 135.0° | 179.9° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
CA | N | H | H2 | 120.0° | 123.9° |
N | CA | C | HA2 | 120.0° | 120.0° |
N | CA | C | HA3 | 120.0° | 119.9° |
N | CA | HA2 | HA3 | 118.4° | 120.0° |
N | CA | C | O | 23.3° | 0.1° |
N | CA | C | N1 | 157.9° | 180.0° |
H | N | CA | C | 180.0° | 56.0° |
H | N | CA | HA2 | 60.0° | 176.1° |
H | N | CA | HA3 | 60.0° | 63.9° |
H2 | N | CA | C | 60.0° | 179.9° |
H2 | N | CA | HA2 | 60.0° | 60.0° |
H2 | N | CA | HA3 | 180.0° | 60.0° |
C | CA | HA2 | HA3 | 118.4° | 120.0° |
CA | C | O | N1 | 178.8° | 179.9° |
CA | C | N1 | CA1 | 179.6° | 180.0° |
CA | C | N1 | H1 | 0.4° | 0.0° |
HA2 | CA | C | O | 143.3° | 120.0° |
HA2 | CA | C | N1 | 37.9° | 60.0° |
HA3 | CA | C | O | 96.7° | 120.0° |
HA3 | CA | C | N1 | 82.1° | 60.1° |
O | C | N1 | CA1 | 1.6° | 0.0° |
O | C | N1 | H1 | 178.4° | 180.0° |
C | N1 | CA1 | H1 | 180.0° | 180.0° |
C | N1 | CA1 | C1 | 114.3° | 85.0° |
C | N1 | CA1 | CB | 125.8° | 155.0° |
C | N1 | CA1 | HA | 5.5° | 35.0° |
N1 | CA1 | C1 | CB | 121.1° | 120.0° |
N1 | CA1 | C1 | HA | 118.5° | 120.0° |
N1 | CA1 | CB | HA | 118.5° | 120.0° |
N1 | CA1 | C1 | O1 | 157.3° | 14.9° |
N1 | CA1 | C1 | C2 | 16.3° | 165.0° |
N1 | CA1 | CB | CG | 62.2° | 65.0° |
N1 | CA1 | CB | HB2 | 57.8° | 55.0° |
N1 | CA1 | CB | HB3 | 177.8° | 175.0° |
H1 | N1 | CA1 | C1 | 65.7° | 95.0° |
H1 | N1 | CA1 | CB | 54.2° | 25.0° |
H1 | N1 | CA1 | HA | 174.6° | 145.0° |
C1 | CA1 | CB | HA | 119.7° | 120.0° |
CA1 | C1 | O1 | C2 | 172.1° | 179.9° |
C1 | CA1 | CB | CG | 176.1° | 175.0° |
C1 | CA1 | CB | HB2 | 63.9° | 65.0° |
C1 | CA1 | CB | HB3 | 56.1° | 55.0° |
CA1 | C1 | C2 | H11 | 89.6° | 0.0° |
CA1 | C1 | C2 | N3 | 90.4° | 179.9° |
CB | CA1 | C1 | O1 | 81.7° | 105.0° |
CB | CA1 | C1 | C2 | 104.7° | 75.0° |
CA1 | CB | CG | HB2 | 120.0° | 120.0° |
CA1 | CB | CG | HB3 | 120.0° | 120.1° |
CA1 | CB | HB2 | HB3 | 118.4° | 120.0° |
CA1 | CB | CG | CD1 | 73.0° | 90.0° |
CA1 | CB | CG | CD2 | 107.7° | 90.3° |
HA | CA1 | C1 | O1 | 38.8° | 135.0° |
HA | CA1 | C1 | C2 | 134.9° | 45.0° |
HA | CA1 | CB | CG | 56.3° | 55.0° |
HA | CA1 | CB | HB2 | 176.3° | 175.0° |
HA | CA1 | CB | HB3 | 63.7° | 65.1° |
O1 | C1 | C2 | H11 | 97.5° | 180.0° |
O1 | C1 | C2 | N3 | 82.5° | 0.0° |
C1 | C2 | H11 | N3 | 180.0° | 180.0° |
C1 | C2 | N3 | N4 | 92.5° | 63.3° |
CG | CB | HB2 | HB3 | 118.4° | 120.0° |
CB | CG | CD1 | CD2 | 179.3° | 179.7° |
CB | CG | CD1 | CE1 | 179.9° | 180.0° |
CB | CG | CD1 | HD1 | 0.1° | 0.1° |
CB | CG | CD2 | CE2 | 179.8° | 180.0° |
CB | CG | CD2 | HD2 | 0.2° | 0.0° |
HB2 | CB | CG | CD1 | 46.9° | 30.0° |
HB2 | CB | CG | CD2 | 132.4° | 149.7° |
HB3 | CB | CG | CD1 | 166.9° | 149.9° |
HB3 | CB | CG | CD2 | 12.3° | 29.8° |
CG | CD1 | CE1 | HD1 | 180.0° | 179.9° |
CD1 | CG | CD2 | CE2 | 0.9° | 0.3° |
CD1 | CG | CD2 | HD2 | 179.1° | 179.7° |
CG | CD1 | CE1 | CZ | 0.0° | 0.1° |
CG | CD1 | CE1 | HE1 | 180.0° | 179.9° |
CD2 | CG | CD1 | CE1 | 0.6° | 0.3° |
CD2 | CG | CD1 | HD1 | 179.4° | 179.8° |
CG | CD2 | CE2 | HD2 | 180.0° | 180.0° |
CG | CD2 | CE2 | CZ | 0.5° | 0.1° |
CG | CD2 | CE2 | HE2 | 179.5° | 180.0° |
CD1 | CE1 | CZ | HE1 | 180.0° | 180.0° |
CD1 | CE1 | CZ | CE2 | 0.4° | 0.2° |
CD1 | CE1 | CZ | HZ | 179.7° | 180.0° |
HD1 | CD1 | CE1 | CZ | 180.0° | 179.9° |
HD1 | CD1 | CE1 | HE1 | 0.0° | 0.0° |
CD2 | CE2 | CZ | CE1 | 0.1° | 0.2° |
CD2 | CE2 | CZ | HE2 | 180.0° | 179.9° |
CD2 | CE2 | CZ | HZ | 179.9° | 180.0° |
HD2 | CD2 | CE2 | CZ | 179.5° | 180.0° |
HD2 | CD2 | CE2 | HE2 | 0.5° | 0.1° |
CE1 | CZ | CE2 | HZ | 180.0° | 179.7° |
CE1 | CZ | CE2 | HE2 | 179.9° | 179.7° |
HE1 | CE1 | CZ | CE2 | 179.6° | 179.8° |
HE1 | CE1 | CZ | HZ | 0.4° | 0.1° |
HE2 | CE2 | CZ | HZ | 0.1° | 0.1° |
H11 | C2 | N3 | N4 | 87.5° | 116.7° |