1YO
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| NAB | NAO | sing | 1.37Å | 1.12Å | |
| NAO | CAG | sing | 1.37Å | 1.33Å | Aromatic |
| NAO | CAN | sing | 1.37Å | 1.33Å | Aromatic |
| SAK | CAN | sing | 1.76Å | 1.75Å | |
| SAK | CAH | sing | 1.81Å | 1.83Å | |
| CAG | NAI | doub | 1.30Å | 1.33Å | Aromatic |
| CAA | CAL | sing | 1.51Å | 1.39Å | |
| CAN | NAJ | doub | 1.31Å | 1.33Å | Aromatic |
| CAL | CAE | doub | 1.38Å | 1.39Å | Aromatic |
| CAL | CAM | sing | 1.38Å | 1.39Å | Aromatic |
| CAE | CAC | sing | 1.38Å | 1.39Å | Aromatic |
| CAM | CAH | sing | 1.51Å | 1.39Å | |
| CAM | CAF | doub | 1.38Å | 1.39Å | Aromatic |
| CAC | CAD | doub | 1.38Å | 1.39Å | Aromatic |
| NAI | NAJ | sing | 1.28Å | 1.13Å | Aromatic |
| CAF | CAD | sing | 1.38Å | 1.39Å | Aromatic |
| CAA | HAC | sing | 1.09Å | 1.10Å | |
| CAA | HAA | sing | 1.09Å | 1.10Å | |
| CAA | HAB | sing | 1.09Å | 1.10Å | |
| CAC | HAD | sing | 1.08Å | 1.08Å | |
| CAD | HAE | sing | 1.08Å | 1.08Å | |
| CAE | HAF | sing | 1.08Å | 1.08Å | |
| CAF | HAG | sing | 1.08Å | 1.08Å | |
| CAG | HAH | sing | 1.08Å | 1.08Å | |
| CAH | HAI | sing | 1.09Å | 1.10Å | |
| CAH | HAJ | sing | 1.09Å | 1.10Å | |
| NAB | HAL | sing | 1.01Å | 1.00Å | |
| NAB | HAK | sing | 1.01Å | 1.00Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| NAB | NAO | CAG | 127.6° | 127.2° |
| NAB | NAO | CAN | 128.0° | 127.1° |
| NAO | NAB | HAL | 109.5° | 111.0° |
| NAO | NAB | HAK | 109.5° | 111.0° |
| CAG | NAO | CAN | 103.7° | 105.7° |
| NAO | CAG | NAI | 106.9° | 107.3° |
| NAO | CAG | HAH | 126.6° | 126.4° |
| NAO | CAN | SAK | 121.7° | 126.5° |
| NAO | CAN | NAJ | 107.3° | 107.0° |
| CAN | SAK | CAH | 99.6° | 100.0° |
| SAK | CAN | NAJ | 121.9° | 126.5° |
| SAK | CAH | CAM | 112.7° | 109.5° |
| SAK | CAH | HAI | 108.7° | 109.5° |
| SAK | CAH | HAJ | 108.7° | 109.5° |
| CAG | NAI | NAJ | 111.4° | 110.1° |
| NAI | CAG | HAH | 126.5° | 126.3° |
| CAA | CAL | CAE | 119.5° | 120.0° |
| CAA | CAL | CAM | 120.0° | 120.0° |
| CAL | CAA | HAC | 109.5° | 109.5° |
| CAL | CAA | HAA | 109.5° | 109.4° |
| CAL | CAA | HAB | 109.5° | 109.5° |
| CAN | NAJ | NAI | 110.8° | 109.9° |
| CAE | CAL | CAM | 119.9° | 120.0° |
| CAL | CAE | CAC | 120.2° | 120.0° |
| CAL | CAE | HAF | 119.9° | 120.0° |
| CAL | CAM | CAH | 119.7° | 120.0° |
| CAL | CAM | CAF | 120.0° | 120.0° |
| CAE | CAC | CAD | 119.8° | 120.0° |
| CAE | CAC | HAD | 120.1° | 120.0° |
| CAC | CAE | HAF | 119.9° | 120.0° |
| CAH | CAM | CAF | 119.8° | 120.0° |
| CAM | CAH | HAI | 108.6° | 109.4° |
| CAM | CAH | HAJ | 108.7° | 109.4° |
| CAM | CAF | CAD | 120.0° | 120.0° |
| CAM | CAF | HAG | 120.0° | 120.0° |
| CAC | CAD | CAF | 120.1° | 120.0° |
| CAD | CAC | HAD | 120.1° | 120.0° |
| CAC | CAD | HAE | 120.0° | 120.0° |
| CAF | CAD | HAE | 119.9° | 120.0° |
| CAD | CAF | HAG | 120.0° | 120.0° |
| HAC | CAA | HAA | 109.5° | 109.5° |
| HAC | CAA | HAB | 109.5° | 109.5° |
| HAA | CAA | HAB | 109.5° | 109.5° |
| HAI | CAH | HAJ | 109.4° | 109.4° |
| HAL | NAB | HAK | 109.5° | 111.1° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| NAB | NAO | CAG | CAN | 170.9° | 179.6° |
| NAB | NAO | CAN | SAK | 42.6° | 0.2° |
| NAB | NAO | CAG | NAI | 170.3° | 180.0° |
| NAB | NAO | CAN | NAJ | 170.0° | 180.0° |
| NAB | NAO | CAG | HAH | 9.7° | 0.3° |
| NAO | NAB | HAL | HAK | 120.0° | 124.0° |
| CAG | NAO | CAN | SAK | 146.6° | 179.8° |
| NAO | CAG | NAI | HAH | 180.0° | 179.7° |
| CAG | NAO | CAN | NAJ | 0.8° | 0.4° |
| NAO | CAG | NAI | NAJ | 0.1° | 0.3° |
| CAG | NAO | NAB | HAL | 180.0° | 90.0° |
| CAG | NAO | NAB | HAK | 60.0° | 146.0° |
| NAO | CAN | SAK | NAJ | 142.6° | 179.7° |
| NAO | CAN | SAK | CAH | 179.6° | 179.7° |
| CAN | NAO | CAG | NAI | 0.6° | 0.4° |
| NAO | CAN | NAJ | NAI | 0.8° | 0.3° |
| CAN | NAO | CAG | HAH | 179.4° | 179.9° |
| CAN | NAO | NAB | HAL | 11.3° | 89.5° |
| CAN | NAO | NAB | HAK | 131.2° | 34.5° |
| CAN | SAK | CAH | CAM | 170.3° | 180.0° |
| SAK | CAN | NAJ | NAI | 146.5° | 180.0° |
| CAN | SAK | CAH | HAI | 49.8° | 60.0° |
| CAN | SAK | CAH | HAJ | 69.2° | 60.0° |
| CAH | SAK | CAN | NAJ | 37.7° | 0.0° |
| SAK | CAH | CAM | CAL | 70.2° | 90.0° |
| SAK | CAH | CAM | HAI | 120.5° | 120.0° |
| SAK | CAH | CAM | HAJ | 120.5° | 120.0° |
| SAK | CAH | CAM | CAF | 118.0° | 90.2° |
| SAK | CAH | HAI | HAJ | 118.5° | 120.0° |
| CAG | NAI | NAJ | CAN | 0.4° | 0.0° |
| CAA | CAL | CAE | CAM | 171.3° | 179.5° |
| CAA | CAL | CAE | CAC | 169.1° | 179.9° |
| CAA | CAL | CAM | CAH | 18.3° | 0.1° |
| CAA | CAL | CAM | CAF | 169.8° | 179.7° |
| CAL | CAA | HAC | HAA | 120.0° | 120.0° |
| CAL | CAA | HAC | HAB | 120.0° | 120.0° |
| CAL | CAA | HAA | HAB | 120.0° | 120.0° |
| CAA | CAL | CAE | HAF | 11.0° | 0.0° |
| CAL | CAE | CAC | HAF | 180.0° | 180.0° |
| CAE | CAL | CAM | CAH | 170.4° | 179.4° |
| CAE | CAL | CAM | CAF | 1.4° | 0.8° |
| CAL | CAE | CAC | CAD | 2.1° | 0.1° |
| CAE | CAL | CAA | HAC | 85.7° | 90.0° |
| CAE | CAL | CAA | HAA | 154.3° | 150.0° |
| CAE | CAL | CAA | HAB | 34.3° | 30.0° |
| CAL | CAE | CAC | HAD | 177.9° | 179.8° |
| CAM | CAL | CAE | CAC | 2.2° | 0.6° |
| CAL | CAM | CAH | CAF | 171.9° | 179.8° |
| CAL | CAM | CAF | CAD | 0.5° | 0.5° |
| CAM | CAL | CAA | HAC | 85.6° | 89.5° |
| CAM | CAL | CAA | HAA | 34.4° | 30.5° |
| CAM | CAL | CAA | HAB | 154.4° | 150.5° |
| CAM | CAL | CAE | HAF | 177.8° | 179.5° |
| CAL | CAM | CAF | HAG | 179.5° | 179.5° |
| CAL | CAM | CAH | HAI | 50.3° | 150.0° |
| CAL | CAM | CAH | HAJ | 169.3° | 30.1° |
| CAE | CAC | CAD | HAD | 180.0° | 179.9° |
| CAE | CAC | CAD | CAF | 1.2° | 0.2° |
| CAE | CAC | CAD | HAE | 178.8° | 179.9° |
| CAH | CAM | CAF | CAD | 171.3° | 179.7° |
| CAH | CAM | CAF | HAG | 8.7° | 0.3° |
| CAM | CAH | HAI | HAJ | 118.5° | 119.9° |
| CAM | CAF | CAD | CAC | 0.4° | 0.0° |
| CAM | CAF | CAD | HAG | 180.0° | 180.0° |
| CAM | CAF | CAD | HAE | 179.6° | 179.9° |
| CAF | CAM | CAH | HAI | 121.6° | 29.8° |
| CAF | CAM | CAH | HAJ | 2.5° | 149.7° |
| CAC | CAD | CAF | HAE | 180.0° | 179.9° |
| CAD | CAC | CAE | HAF | 177.9° | 180.0° |
| CAC | CAD | CAF | HAG | 179.6° | 180.0° |
| NAJ | NAI | CAG | HAH | 179.8° | 180.0° |
| CAF | CAD | CAC | HAD | 178.8° | 179.9° |
| HAC | CAA | HAA | HAB | 120.0° | 120.0° |
| HAD | CAC | CAD | HAE | 1.2° | 0.0° |
| HAD | CAC | CAE | HAF | 2.1° | 0.2° |
| HAE | CAD | CAF | HAG | 0.4° | 0.1° |
