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1YK

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C27O3sing1.43Å1.42Å
O3C3sing1.36Å1.41Å
C28O4sing1.43Å1.42Å
C3C2doub1.38Å1.38ÅAromatic
C3C4sing1.39Å1.30ÅAromatic
O4C4sing1.36Å1.41Å
C2C1sing1.40Å1.46ÅAromatic
O7C7doub1.22Å1.21Å
C4C5doub1.39Å1.29ÅAromatic
O6C7sing1.34Å1.39Å
O6C8sing1.34Å1.41Å
C7C11sing1.40Å1.48Å
C1C8sing1.48Å1.50Å
C1C6doub1.40Å1.47ÅAromatic
C5C6sing1.38Å1.38ÅAromatic
C5O5sing1.36Å1.40Å
C8C9doub1.36Å1.36Å
O5C29sing1.43Å1.41Å
C11C12sing1.51Å1.52Å
C11C10doub1.38Å1.33Å
C12C13sing1.53Å1.53Å
C9C10sing1.41Å1.51Å
O1C19doub1.21Å1.21Å
C10O8sing1.35Å1.40Å
C25C18sing1.53Å1.52Å
C19C18sing1.52Å1.51Å
C19C20sing1.47Å1.48Å
C13O9sing1.45Å1.41Å
C13C18sing1.52Å1.55Å
C13C14sing1.53Å1.54Å
C26C14sing1.53Å1.52Å
C18C17sing1.53Å1.52Å
C20C21doub1.32Å1.35Å
O8C14sing1.45Å1.38Å
C14C15sing1.53Å1.55Å
C21C22sing1.50Å1.55Å
C17O2sing1.45Å1.41Å
C17C22sing1.52Å1.57Å
C17C16sing1.53Å1.51Å
C15C16sing1.53Å1.53Å
C22C23sing1.53Å1.53Å
C22C24sing1.55Å1.51Å
C26H1sing1.09Å1.10Å
C26H2sing1.09Å1.10Å
C26H3sing1.09Å1.10Å
C15H4sing1.09Å1.10Å
C15H5sing1.09Å1.10Å
C16H6sing1.09Å1.10Å
C16H7sing1.09Å1.10Å
C12H8sing1.09Å1.10Å
C12H9sing1.08Å1.10Å
C9H10sing1.08Å1.08Å
C6H11sing1.08Å1.08Å
C2H12sing1.08Å1.08Å
C27H13sing1.09Å1.10Å
C27H14sing1.09Å1.10Å
C27H15sing1.09Å1.10Å
C28H16sing1.09Å1.10Å
C28H17sing1.09Å1.10Å
C28H18sing1.09Å1.10Å
C29H19sing1.09Å1.10Å
C29H20sing1.09Å1.10Å
C29H21sing1.09Å1.10Å
O9H22sing0.97Å0.95Å
C20H23sing1.08Å1.08Å
C21H24sing1.08Å1.08Å
C24H25sing1.09Å1.10Å
C24H26sing1.09Å1.10Å
C24H27sing1.09Å1.10Å
C23H28sing1.09Å1.10Å
C23H29sing1.09Å1.10Å
C23H30sing1.09Å1.10Å
C25H31sing1.09Å1.10Å
C25H32sing1.09Å1.10Å
C25H33sing1.09Å1.10Å
O2H34sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C27O3C3114.1°117.0°
O3C27H13109.5°109.5°
O3C27H14109.5°109.5°
O3C27H15109.5°109.5°
O3C3C2115.2°120.0°
O3C3C4124.2°120.0°
C28O4C4119.8°117.0°
O4C28H16109.5°109.5°
O4C28H17109.5°109.5°
O4C28H18109.5°109.5°
C2C3C4120.6°120.0°
C3C2C1122.4°119.9°
C3C2H12118.8°120.0°
C3C4O4124.0°119.9°
C3C4C5121.2°120.1°
O4C4C5114.8°119.9°
C2C1C8118.5°120.1°
C2C1C6112.3°119.9°
C1C2H12118.8°120.1°
O7C7O6118.7°119.3°
O7C7C11121.9°119.4°
C4C5C6125.1°120.0°
C4C5O5116.2°119.9°
C7O6C8121.4°119.9°
O6C7C11119.4°121.2°
O6C8C1113.6°119.0°
O6C8C9121.0°122.0°
C7C11C12120.2°119.7°
C7C11C10118.8°119.2°
C8C1C6129.2°120.0°
C1C8C9125.5°119.0°
C1C6C5118.3°120.0°
C1C6H11120.8°120.0°
C6C5O5118.7°120.0°
C5C6H11120.9°120.1°
C5O5C29112.7°117.0°
C8C9C10117.9°119.5°
C8C9H10121.0°120.2°
O5C29H19109.5°109.5°
O5C29H20109.4°109.5°
O5C29H21109.5°109.5°
C12C11C10120.9°121.1°
C11C12C13107.4°108.5°
C11C12H8110.0°108.2°
C11C12H9110.0°109.1°
C11C10C9121.5°118.1°
C11C10O8124.3°122.6°
C12C13O9108.1°106.7°
C12C13C18111.5°111.6°
C12C13C14108.3°108.4°
C13C12H8110.0°109.2°
C13C12H9110.0°112.4°
C9C10O8114.2°119.2°
C10C9H10121.0°120.2°
O1C19C18123.0°122.2°
O1C19C20117.2°121.3°
C10O8C14115.7°116.3°
C25C18C19103.7°107.5°
C25C18C13110.0°111.8°
C25C18C17115.5°112.0°
C18C25H31109.5°109.5°
C18C25H32109.5°109.5°
C18C25H33109.4°109.5°
C18C19C20119.8°116.5°
C19C18C13112.5°108.9°
C19C18C17106.0°106.4°
C19C20C21120.6°120.6°
C19C20H23119.7°119.6°
O9C13C18107.4°108.4°
O9C13C14106.2°107.4°
C13O9H22109.5°114.0°
C18C13C14115.1°114.2°
C13C18C17109.1°109.9°
C13C14C26116.1°113.3°
C13C14O8107.8°106.0°
C13C14C15111.1°111.8°
C26C14O8103.9°107.5°
C26C14C15110.6°110.0°
C14C26H1109.5°109.4°
C14C26H2109.4°109.5°
C14C26H3109.5°109.5°
C18C17O2108.1°108.0°
C18C17C22115.1°113.7°
C18C17C16109.6°109.3°
C20C21C22123.1°124.2°
C21C20H23119.7°119.8°
C20C21H24118.5°118.1°
O8C14C15106.7°108.0°
C14C15C16108.4°110.7°
C14C15H4109.7°110.0°
C14C15H5109.7°109.2°
C21C22C17110.1°112.9°
C21C22C23109.9°109.8°
C21C22C24107.6°106.5°
C22C21H24118.5°117.8°
O2C17C22106.8°106.5°
O2C17C16107.1°107.2°
C17O2H34109.5°114.0°
C22C17C16109.8°111.9°
C17C22C23115.7°112.7°
C17C22C24109.1°107.5°
C17C16C15112.2°108.5°
C17C16H6108.8°109.8°
C17C16H7108.8°111.7°
C16C15H4109.7°109.6°
C16C15H5109.8°108.6°
C15C16H6108.8°108.4°
C15C16H7108.8°109.4°
C23C22C24104.0°107.1°
C22C23H28109.5°109.5°
C22C23H29109.4°109.5°
C22C23H30109.5°109.4°
C22C24H25109.5°109.5°
C22C24H26109.5°109.5°
C22C24H27109.5°109.4°
H1C26H2109.5°109.4°
H1C26H3109.5°109.5°
H2C26H3109.5°109.5°
H4C15H5109.4°108.7°
H6C16H7109.5°109.1°
H8C12H9109.5°109.3°
H13C27H14109.4°109.4°
H13C27H15109.5°109.5°
H14C27H15109.5°109.5°
H16C28H17109.5°109.4°
H16C28H18109.5°109.5°
H17C28H18109.4°109.5°
H19C29H20109.5°109.4°
H19C29H21109.5°109.5°
H20C29H21109.5°109.5°
H25C24H26109.4°109.5°
H25C24H27109.5°109.5°
H26C24H27109.5°109.5°
H28C23H29109.5°109.5°
H28C23H30109.5°109.5°
H29C23H30109.5°109.5°
H31C25H32109.4°109.5°
H31C25H33109.5°109.5°
H32C25H33109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C27O3C3C269.8°0.0°
C27O3C3C4111.2°179.6°
O3C27H13H14120.0°120.0°
O3C27H13H15120.0°120.0°
O3C27H14H15120.0°120.0°
O3C3C2C4179.0°179.6°
O3C3C4O42.2°0.2°
O3C3C2C1179.5°180.0°
O3C3C4C5179.5°179.8°
O3C3C2H120.5°0.5°
C3O3C27H13180.0°180.0°
C3O3C27H1460.0°60.0°
C3O3C27H1560.0°60.0°
C28O4C4C347.3°90.0°
C28O4C4C5135.2°90.0°
O4C28H16H17120.0°120.0°
O4C28H16H18120.0°120.0°
O4C28H17H18120.0°120.0°
C2C3C4O4178.9°179.8°
C3C2C1H12180.0°179.5°
C2C3C4C51.6°0.2°
C3C2C1C8179.8°179.8°
C3C2C1C60.3°0.5°
C3C4O4C5177.5°179.9°
C4C3C2C10.5°0.4°
C3C4C5C61.8°0.0°
C3C4C5O5179.2°180.0°
C4C3C2H12179.5°179.9°
O4C4C5C6179.4°180.0°
O4C4C5O51.6°0.1°
C4O4C28H16180.0°60.0°
C4O4C28H1760.0°180.0°
C4O4C28H1860.0°60.0°
C2C1C8O60.8°179.6°
C2C1C8C6179.9°179.7°
C2C1C6C50.2°0.3°
C2C1C8C9178.7°0.3°
C2C1C6H11179.8°179.8°
O7C7O6C11179.9°180.0°
O7C7O6C8178.6°179.9°
O7C7C11C121.7°0.5°
O7C7C11C10179.3°179.7°
C4C5C6C10.9°0.0°
C4C5C6O5179.0°180.0°
C4C5O5C29143.2°180.0°
C4C5C6H11179.2°179.9°
C7O6C8C1178.0°179.4°
C7O6C8C91.6°0.4°
O6C7C11C12178.2°179.5°
O6C7C11C100.6°0.3°
C8O6C7C111.5°0.1°
O6C8C1C9179.5°179.9°
O6C8C1C6179.1°0.1°
O6C8C9C100.3°0.4°
O6C8C9H10179.7°179.5°
C7C11C12C10177.6°179.8°
C7C11C12C13161.4°163.5°
C7C11C10C92.4°0.3°
C7C11C10O8179.9°179.9°
C7C11C12H878.9°45.2°
C7C11C12H941.7°73.7°
C8C1C6C5179.9°180.0°
C1C8C9C10179.8°179.5°
C1C8C9H100.2°0.7°
C8C1C6H110.1°0.1°
C8C1C2H120.2°0.3°
C1C6C5H11180.0°179.9°
C1C6C5O5179.8°180.0°
C6C1C8C91.4°180.0°
C6C1C2H12179.7°180.0°
C6C5O5C2937.7°0.0°
O5C5C6H110.2°0.0°
C5O5C29H19180.0°60.0°
C5O5C29H2060.0°180.0°
C5O5C29H2160.0°60.0°
C8C9C10C112.4°0.0°
C8C9C10H10180.0°179.8°
C8C9C10O8179.7°179.8°
O5C29H19H20120.0°120.0°
O5C29H19H21120.0°120.0°
O5C29H20H21120.0°120.0°
C11C12C13H8119.7°117.7°
C11C12C13H9119.7°120.7°
C12C11C10C9179.9°179.5°
C12C11C10O82.2°0.3°
C11C12C13O963.2°65.5°
C11C12C13C18179.0°176.3°
C11C12C13C1451.4°49.8°
C11C12H8H9120.9°118.7°
C10C11C12C1321.0°16.7°
C11C10C9O8177.9°179.8°
C11C10O8C1417.5°19.8°
C10C11C12H898.7°135.0°
C10C11C12H9140.7°106.1°
C11C10C9H10177.6°179.9°
C12C13C18C2547.7°49.9°
C12C13C18C1967.4°68.8°
C12C13O9C18120.4°120.2°
C12C13O9C14116.0°116.0°
C12C13C18C14123.8°123.3°
C12C13C14C2648.0°48.8°
C12C13C18C17175.3°175.0°
C12C13C14O868.0°68.8°
C12C13C14C15175.4°173.8°
C13C12H8H9121.0°123.4°
C12C13O9H2271.8°59.8°
C9C10O8C14164.6°159.9°
O1C19C18C25101.2°107.9°
O1C19C18C20179.7°179.7°
O1C19C18C1317.6°13.5°
O1C19C18C17136.7°131.9°
O1C19C20C21163.8°160.4°
O1C19C20H2316.1°19.8°
C10O8C14C1349.0°53.2°
C10O8C14C2674.8°68.2°
C10O8C14C15168.3°173.1°
O8C10C9H100.3°0.4°
C25C18C19C13118.8°121.4°
C25C18C19C17122.0°120.2°
C25C18C19C2078.5°71.8°
C25C18C13O9165.9°167.0°
C25C18C13C17127.6°125.1°
C25C18C13C1476.1°73.3°
C25C18C17O2175.8°177.9°
C25C18C17C2256.5°59.9°
C25C18C17C1667.8°65.9°
C18C25H31H32120.0°120.0°
C18C25H31H33120.0°120.0°
C18C25H32H33120.0°120.0°
C19C18C13O950.8°48.4°
C19C18C13C17117.3°116.3°
C19C18C13C14168.8°168.0°
C18C19C20C2116.4°19.9°
C19C18C17O261.6°60.6°
C19C18C17C2257.7°57.3°
C19C18C17C16178.0°176.9°
C18C19C20H23163.6°159.9°
C19C18C25H31180.0°170.1°
C19C18C25H3260.0°69.9°
C19C18C25H3360.0°50.1°
C20C19C18C13162.7°166.8°
C20C19C18C1743.5°48.4°
C19C20C21H23180.0°179.8°
C19C20C21C220.2°3.3°
C19C20C21H24179.8°176.9°
O9C13C18C14117.9°119.6°
O9C13C14C26163.9°163.6°
O9C13C18C1766.5°67.9°
O9C13C14O847.9°46.1°
O9C13C14C1568.7°71.3°
O9C13C12H8177.1°52.2°
O9C13C12H956.5°173.8°
C18C13C14C2677.5°76.2°
C18C13C14O8166.5°166.2°
C18C13C14C1549.9°48.8°
C13C18C17O259.8°57.2°
C13C18C17C22179.1°175.1°
C13C18C17C1656.6°59.1°
C18C13C12H859.3°65.9°
C18C13C12H961.3°55.6°
C18C13O9H2248.7°180.0°
C13C18C25H3159.4°70.4°
C13C18C25H3260.6°49.6°
C13C18C25H33179.4°169.7°
C13C14C26O8118.2°116.7°
C13C14C26C15127.7°126.0°
C14C13C18C1751.4°51.7°
C13C14O8C15119.4°119.9°
C13C14C15C1652.0°52.7°
C13C14C26H1180.0°167.2°
C13C14C26H260.0°47.3°
C13C14C26H360.0°72.8°
C13C14C15H467.9°68.5°
C13C14C15H5171.8°172.3°
C14C13C12H868.3°167.6°
C14C13C12H9171.1°70.9°
C14C13O9H22172.2°56.2°
C26C14O8C15116.9°118.7°
C26C14C15C1678.4°74.1°
C14C26H1H2120.0°120.0°
C14C26H1H3120.0°120.0°
C14C26H2H3120.0°120.1°
C26C14C15H4161.7°164.7°
C26C14C15H541.4°45.5°
C18C17C22C2144.1°37.7°
C18C17O2C22124.5°122.4°
C18C17O2C16118.0°117.7°
C18C17C22C16124.2°124.4°
C18C17C16C1564.5°64.2°
C18C17C22C2381.3°87.4°
C18C17C22C24162.0°154.8°
C18C17C16H655.9°177.6°
C18C17C16H7175.1°56.5°
C17C18C25H3164.5°53.5°
C17C18C25H32175.5°173.5°
C17C18C25H3355.5°66.4°
C18C17O2H34180.0°177.6°
C20C21C22H24180.0°179.8°
C20C21C22C1713.3°5.9°
C20C21C22C23115.3°120.8°
C20C21C22C24132.1°123.6°
O8C14C15C16169.2°168.9°
O8C14C26H161.8°50.5°
O8C14C26H258.2°69.5°
O8C14C26H3178.2°170.5°
O8C14C15H449.3°47.7°
O8C14C15H570.9°71.5°
C14C15C16C1761.0°60.8°
C14C15C16H4119.9°121.5°
C14C15C16H5119.9°119.9°
C15C14C26H152.3°66.8°
C15C14C26H2172.3°173.2°
C15C14C26H367.7°53.2°
C14C15H4H5120.5°119.5°
C14C15C16H659.3°180.0°
C14C15C16H7178.5°61.2°
C21C22C17O276.0°81.1°
C21C22C17C23125.4°125.1°
C21C22C17C24117.9°117.1°
C21C22C17C16168.3°162.1°
C21C22C23C24115.0°115.2°
C22C21C20H23179.8°176.9°
C21C22C24H25180.0°178.9°
C21C22C24H2660.0°58.8°
C21C22C24H2760.0°61.2°
C21C22C23H28180.0°66.8°
C21C22C23H2960.0°53.2°
C21C22C23H3060.0°173.2°
O2C17C22C16115.7°116.8°
O2C17C16C1552.6°52.6°
O2C17C22C23158.6°153.9°
O2C17C22C2441.9°36.1°
O2C17C16H6173.0°65.7°
O2C17C16H767.8°173.3°
C22C17C16C15168.2°169.0°
C17C22C23C24119.6°118.0°
C22C17C16H671.4°50.8°
C22C17C16H747.7°70.3°
C17C22C21H24166.8°173.9°
C17C22C24H2560.6°59.9°
C17C22C24H26179.5°180.0°
C17C22C24H2759.5°60.0°
C17C22C23H2854.5°60.0°
C17C22C23H2965.5°180.0°
C17C22C23H30174.5°60.0°
C22C17O2H3455.5°60.0°
C17C16C15H6120.4°119.1°
C17C16C15H7120.4°122.0°
C16C17C22C2342.9°37.0°
C16C17C22C2473.8°80.8°
C17C16C15H458.8°60.7°
C17C16C15H5179.1°179.3°
C17C16H6H7118.7°122.6°
C16C17O2H3462.0°59.9°
C16C15H4H5120.5°118.6°
C15C16H6H7118.8°119.0°
C23C22C21H2464.7°59.4°
C23C22C24H2563.4°61.4°
C23C22C24H2656.6°58.7°
C23C22C24H27176.6°178.6°
C22C23H28H29120.0°120.0°
C22C23H28H30120.0°120.0°
C22C23H29H30120.0°119.9°
C24C22C21H2448.0°56.2°
C22C24H25H26120.0°120.1°
C22C24H25H27120.0°119.9°
C22C24H26H27120.0°119.9°
C24C22C23H2865.0°178.0°
C24C22C23H29175.0°62.0°
C24C22C23H3055.0°58.0°
H1C26H2H3120.0°120.0°
H4C15C16H6179.2°58.5°
H4C15C16H761.6°177.3°
H5C15C16H660.5°60.1°
H5C15C16H758.7°58.7°
H13C27H14H15119.9°120.0°
H16C28H17H18120.0°120.0°
H19C29H20H21120.0°120.0°
H23C20C21H240.2°2.9°
H25C24H26H27120.0°120.0°
H28C23H29H30120.0°120.0°
H31C25H32H33120.0°120.0°

224931

PDB entries from 2024-09-11

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