1XO
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
C7 | C5 | doub | 1.33Å | 1.33Å | Aromatic |
C7 | S1 | sing | 1.76Å | 1.73Å | Aromatic |
C5 | C3 | sing | 1.38Å | 1.47Å | Aromatic |
S1 | C2 | sing | 1.76Å | 1.73Å | Aromatic |
C3 | C2 | doub | 1.33Å | 1.33Å | Aromatic |
C2 | C9 | sing | 1.51Å | 1.50Å | |
C9 | N12 | sing | 1.46Å | 1.47Å | |
C26 | C24 | doub | 1.38Å | 1.40Å | Aromatic |
C26 | C18 | sing | 1.40Å | 1.40Å | Aromatic |
C24 | C22 | sing | 1.39Å | 1.40Å | Aromatic |
N17 | C18 | sing | 1.36Å | 1.35Å | |
N17 | C16 | doub | 1.30Å | 1.28Å | |
C18 | C19 | doub | 1.41Å | 1.41Å | Aromatic |
C13 | C16 | sing | 1.51Å | 1.50Å | |
C13 | N12 | sing | 1.46Å | 1.46Å | |
C22 | C20 | doub | 1.38Å | 1.40Å | Aromatic |
C16 | N29 | sing | 1.36Å | 1.35Å | |
C19 | C20 | sing | 1.39Å | 1.40Å | Aromatic |
C19 | C28 | sing | 1.47Å | 1.51Å | |
N12 | C32 | sing | 1.35Å | 1.36Å | |
N29 | C28 | sing | 1.35Å | 1.34Å | |
C28 | O31 | doub | 1.22Å | 1.24Å | |
C32 | C34 | sing | 1.51Å | 1.52Å | |
C32 | O33 | doub | 1.21Å | 1.23Å | |
C34 | C37 | sing | 1.53Å | 1.56Å | |
C37 | C40 | sing | 1.51Å | 1.55Å | |
C49 | C40 | doub | 1.38Å | 1.40Å | Aromatic |
C49 | C47 | sing | 1.38Å | 1.40Å | Aromatic |
C40 | C41 | sing | 1.38Å | 1.41Å | Aromatic |
C47 | C45 | doub | 1.38Å | 1.40Å | Aromatic |
C41 | C43 | doub | 1.38Å | 1.40Å | Aromatic |
C45 | C43 | sing | 1.38Å | 1.40Å | Aromatic |
C3 | H1 | sing | 1.08Å | 1.08Å | |
C5 | H2 | sing | 1.08Å | 1.08Å | |
C7 | H3 | sing | 1.08Å | 1.08Å | |
C9 | H4 | sing | 1.09Å | 1.10Å | |
C9 | H5 | sing | 1.09Å | 1.10Å | |
C13 | H6 | sing | 1.09Å | 1.10Å | |
C13 | H7 | sing | 1.09Å | 1.10Å | |
C20 | H8 | sing | 1.08Å | 1.08Å | |
C22 | H9 | sing | 1.08Å | 1.08Å | |
C24 | H10 | sing | 1.08Å | 1.08Å | |
C26 | H11 | sing | 1.08Å | 1.08Å | |
N29 | H12 | sing | 0.97Å | 1.00Å | |
C34 | H13 | sing | 1.09Å | 1.10Å | |
C34 | H14 | sing | 1.09Å | 1.10Å | |
C37 | H15 | sing | 1.09Å | 1.10Å | |
C37 | H16 | sing | 1.09Å | 1.10Å | |
C41 | H17 | sing | 1.08Å | 1.08Å | |
C43 | H18 | sing | 1.08Å | 1.08Å | |
C45 | H19 | sing | 1.08Å | 1.08Å | |
C47 | H20 | sing | 1.08Å | 1.08Å | |
C49 | H21 | sing | 1.08Å | 1.08Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
C5 | C7 | S1 | 113.0° | 109.6° |
C7 | C5 | C3 | 111.7° | 114.9° |
C7 | C5 | H2 | 124.1° | 122.5° |
C5 | C7 | H3 | 123.5° | 125.2° |
C7 | S1 | C2 | 90.5° | 91.0° |
S1 | C7 | H3 | 123.5° | 125.2° |
C5 | C3 | C2 | 112.0° | 114.9° |
C5 | C3 | H1 | 124.0° | 122.6° |
C3 | C5 | H2 | 124.2° | 122.6° |
S1 | C2 | C3 | 112.8° | 109.6° |
S1 | C2 | C9 | 124.0° | 125.2° |
C3 | C2 | C9 | 123.2° | 125.2° |
C2 | C3 | H1 | 124.0° | 122.5° |
C2 | C9 | N12 | 115.9° | 109.5° |
C2 | C9 | H4 | 107.9° | 109.5° |
C2 | C9 | H5 | 107.8° | 109.4° |
C9 | N12 | C13 | 120.6° | 120.0° |
C9 | N12 | C32 | 119.6° | 120.0° |
N12 | C9 | H4 | 107.8° | 109.5° |
N12 | C9 | H5 | 107.8° | 109.5° |
C24 | C26 | C18 | 119.1° | 119.6° |
C26 | C24 | C22 | 119.9° | 120.8° |
C26 | C24 | H10 | 120.1° | 119.5° |
C24 | C26 | H11 | 120.5° | 120.2° |
C26 | C18 | N17 | 119.4° | 121.7° |
C26 | C18 | C19 | 120.9° | 119.4° |
C18 | C26 | H11 | 120.4° | 120.1° |
C24 | C22 | C20 | 121.2° | 120.6° |
C24 | C22 | H9 | 119.4° | 119.7° |
C22 | C24 | H10 | 120.1° | 119.6° |
C18 | N17 | C16 | 121.6° | 121.6° |
N17 | C18 | C19 | 119.7° | 119.0° |
N17 | C16 | C13 | 120.7° | 118.3° |
N17 | C16 | N29 | 124.0° | 123.4° |
C18 | C19 | C20 | 120.0° | 120.1° |
C18 | C19 | C28 | 117.0° | 118.0° |
C16 | C13 | N12 | 118.3° | 109.5° |
C13 | C16 | N29 | 115.1° | 118.3° |
C16 | C13 | H6 | 107.2° | 109.5° |
C16 | C13 | H7 | 107.2° | 109.5° |
C13 | N12 | C32 | 119.9° | 120.0° |
N12 | C13 | H6 | 107.2° | 109.5° |
N12 | C13 | H7 | 107.2° | 109.4° |
C22 | C20 | C19 | 118.8° | 119.5° |
C22 | C20 | H8 | 120.6° | 120.2° |
C20 | C22 | H9 | 119.4° | 119.7° |
C16 | N29 | C28 | 121.4° | 120.6° |
C16 | N29 | H12 | 119.3° | 119.7° |
C20 | C19 | C28 | 122.9° | 121.9° |
C19 | C20 | H8 | 120.6° | 120.3° |
C19 | C28 | N29 | 116.2° | 117.4° |
C19 | C28 | O31 | 121.8° | 121.3° |
N12 | C32 | C34 | 122.5° | 120.0° |
N12 | C32 | O33 | 121.1° | 120.0° |
N29 | C28 | O31 | 122.0° | 121.3° |
C28 | N29 | H12 | 119.3° | 119.7° |
C34 | C32 | O33 | 116.4° | 120.0° |
C32 | C34 | C37 | 109.6° | 109.5° |
C32 | C34 | H13 | 109.4° | 109.4° |
C32 | C34 | H14 | 109.5° | 109.5° |
C34 | C37 | C40 | 112.2° | 109.5° |
C37 | C34 | H13 | 109.5° | 109.4° |
C37 | C34 | H14 | 109.4° | 109.5° |
C34 | C37 | H15 | 108.8° | 109.4° |
C34 | C37 | H16 | 108.8° | 109.5° |
C37 | C40 | C49 | 121.5° | 120.0° |
C37 | C40 | C41 | 120.1° | 120.0° |
C40 | C37 | H15 | 108.8° | 109.5° |
C40 | C37 | H16 | 108.8° | 109.5° |
C40 | C49 | C47 | 121.3° | 120.0° |
C49 | C40 | C41 | 118.4° | 120.0° |
C40 | C49 | H21 | 119.4° | 120.0° |
C49 | C47 | C45 | 119.7° | 120.0° |
C49 | C47 | H20 | 120.1° | 120.0° |
C47 | C49 | H21 | 119.4° | 120.0° |
C40 | C41 | C43 | 120.7° | 120.0° |
C40 | C41 | H17 | 119.7° | 120.0° |
C47 | C45 | C43 | 120.0° | 120.0° |
C47 | C45 | H19 | 120.0° | 120.1° |
C45 | C47 | H20 | 120.1° | 120.0° |
C41 | C43 | C45 | 119.9° | 120.0° |
C43 | C41 | H17 | 119.6° | 120.0° |
C41 | C43 | H18 | 120.1° | 120.0° |
C45 | C43 | H18 | 120.1° | 120.0° |
C43 | C45 | H19 | 120.0° | 120.0° |
H4 | C9 | H5 | 109.5° | 109.5° |
H6 | C13 | H7 | 109.5° | 109.5° |
H13 | C34 | H14 | 109.4° | 109.5° |
H15 | C37 | H16 | 109.5° | 109.4° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
C5 | C7 | S1 | H3 | 180.0° | 179.9° |
C7 | C5 | C3 | H2 | 180.0° | 180.0° |
C5 | C7 | S1 | C2 | 0.3° | 0.1° |
C7 | C5 | C3 | C2 | 0.0° | 0.0° |
C7 | C5 | C3 | H1 | 180.0° | 179.9° |
S1 | C7 | C5 | C3 | 0.2° | 0.0° |
C7 | S1 | C2 | C3 | 0.3° | 0.1° |
C7 | S1 | C2 | C9 | 178.7° | 180.0° |
S1 | C7 | C5 | H2 | 179.8° | 180.0° |
C5 | C3 | C2 | S1 | 0.3° | 0.0° |
C5 | C3 | C2 | H1 | 180.0° | 179.9° |
C5 | C3 | C2 | C9 | 178.7° | 180.0° |
C3 | C5 | C7 | H3 | 179.8° | 179.9° |
S1 | C2 | C3 | C9 | 178.4° | 180.0° |
S1 | C2 | C9 | N12 | 44.2° | 90.0° |
S1 | C2 | C3 | H1 | 179.8° | 180.0° |
C2 | S1 | C7 | H3 | 179.7° | 180.0° |
S1 | C2 | C9 | H4 | 165.1° | 30.0° |
S1 | C2 | C9 | H5 | 76.7° | 150.0° |
C3 | C2 | C9 | N12 | 137.6° | 90.0° |
C2 | C3 | C5 | H2 | 180.0° | 180.0° |
C3 | C2 | C9 | H4 | 16.6° | 150.0° |
C3 | C2 | C9 | H5 | 101.5° | 30.0° |
C2 | C9 | N12 | H4 | 120.9° | 120.0° |
C2 | C9 | N12 | H5 | 120.9° | 120.0° |
C2 | C9 | N12 | C13 | 78.3° | 90.0° |
C2 | C9 | N12 | C32 | 101.6° | 90.0° |
C9 | C2 | C3 | H1 | 1.4° | 0.0° |
C2 | C9 | H4 | H5 | 117.1° | 120.0° |
C9 | N12 | C13 | C16 | 108.5° | 90.0° |
C9 | N12 | C13 | C32 | 180.0° | 179.9° |
C9 | N12 | C32 | C34 | 2.7° | 0.1° |
C9 | N12 | C32 | O33 | 179.8° | 180.0° |
N12 | C9 | H4 | H5 | 117.1° | 120.0° |
C9 | N12 | C13 | H6 | 130.3° | 150.0° |
C9 | N12 | C13 | H7 | 12.8° | 30.0° |
C24 | C26 | C18 | H11 | 180.0° | 179.9° |
C26 | C24 | C22 | H10 | 180.0° | 179.9° |
C24 | C26 | C18 | N17 | 179.7° | 180.0° |
C24 | C26 | C18 | C19 | 0.1° | 0.0° |
C26 | C24 | C22 | C20 | 0.0° | 0.0° |
C26 | C24 | C22 | H9 | 180.0° | 180.0° |
C18 | C26 | C24 | C22 | 0.0° | 0.1° |
C26 | C18 | N17 | C19 | 179.9° | 180.0° |
C26 | C18 | N17 | C16 | 177.8° | 180.0° |
C26 | C18 | C19 | C20 | 0.2° | 0.0° |
C26 | C18 | C19 | C28 | 179.1° | 180.0° |
C18 | C26 | C24 | H10 | 180.0° | 180.0° |
C24 | C22 | C20 | H9 | 180.0° | 180.0° |
C24 | C22 | C20 | C19 | 0.1° | 0.0° |
C24 | C22 | C20 | H8 | 180.0° | 180.0° |
C22 | C24 | C26 | H11 | 180.0° | 180.0° |
C18 | N17 | C16 | C13 | 179.1° | 180.0° |
C18 | N17 | C16 | N29 | 4.2° | 0.3° |
N17 | C18 | C19 | C20 | 179.7° | 180.0° |
N17 | C18 | C19 | C28 | 1.0° | 0.0° |
N17 | C18 | C26 | H11 | 0.3° | 0.0° |
C16 | N17 | C18 | C19 | 2.1° | 0.0° |
N17 | C16 | C13 | N29 | 175.4° | 179.7° |
N17 | C16 | C13 | N12 | 39.4° | 0.3° |
N17 | C16 | N29 | C28 | 2.8° | 0.6° |
N17 | C16 | C13 | H6 | 160.7° | 119.7° |
N17 | C16 | C13 | H7 | 81.8° | 120.2° |
N17 | C16 | N29 | H12 | 177.1° | 179.7° |
C18 | C19 | C20 | C22 | 0.1° | 0.0° |
C18 | C19 | C20 | C28 | 179.3° | 180.0° |
C18 | C19 | C28 | N29 | 2.2° | 0.3° |
C18 | C19 | C28 | O31 | 176.6° | 180.0° |
C18 | C19 | C20 | H8 | 179.9° | 180.0° |
C19 | C18 | C26 | H11 | 179.9° | 180.0° |
C16 | C13 | N12 | H6 | 121.3° | 120.0° |
C16 | C13 | N12 | H7 | 121.2° | 120.0° |
C16 | C13 | N12 | C32 | 71.5° | 90.0° |
C13 | C16 | N29 | C28 | 178.0° | 179.7° |
C16 | C13 | H6 | H7 | 116.0° | 120.0° |
C13 | C16 | N29 | H12 | 1.9° | 0.0° |
N12 | C13 | C16 | N29 | 145.2° | 180.0° |
C13 | N12 | C32 | C34 | 177.3° | 180.0° |
C13 | N12 | C32 | O33 | 0.2° | 0.1° |
C13 | N12 | C9 | H4 | 160.7° | 150.0° |
C13 | N12 | C9 | H5 | 42.6° | 30.0° |
N12 | C13 | H6 | H7 | 116.0° | 120.0° |
C22 | C20 | C19 | H8 | 180.0° | 180.0° |
C22 | C20 | C19 | C28 | 179.1° | 180.0° |
C20 | C22 | C24 | H10 | 180.0° | 180.0° |
C16 | N29 | C28 | C19 | 0.4° | 0.6° |
C16 | N29 | C28 | H12 | 180.0° | 179.7° |
C16 | N29 | C28 | O31 | 178.3° | 179.7° |
N29 | C16 | C13 | H6 | 23.9° | 60.0° |
N29 | C16 | C13 | H7 | 93.5° | 60.0° |
C20 | C19 | C28 | N29 | 178.5° | 179.7° |
C20 | C19 | C28 | O31 | 2.7° | 0.0° |
C19 | C20 | C22 | H9 | 179.9° | 180.0° |
C19 | C28 | N29 | O31 | 178.7° | 179.7° |
C28 | C19 | C20 | H8 | 0.8° | 0.0° |
C19 | C28 | N29 | H12 | 179.6° | 179.7° |
N12 | C32 | C34 | O33 | 177.5° | 179.9° |
N12 | C32 | C34 | C37 | 81.7° | 180.0° |
C32 | N12 | C9 | H4 | 19.3° | 30.0° |
C32 | N12 | C9 | H5 | 137.4° | 150.1° |
C32 | N12 | C13 | H6 | 49.7° | 30.0° |
C32 | N12 | C13 | H7 | 167.2° | 150.0° |
N12 | C32 | C34 | H13 | 38.3° | 60.1° |
N12 | C32 | C34 | H14 | 158.3° | 59.9° |
O31 | C28 | N29 | H12 | 1.7° | 0.0° |
C32 | C34 | C37 | H13 | 120.0° | 119.9° |
C32 | C34 | C37 | H14 | 120.0° | 120.1° |
C32 | C34 | C37 | C40 | 63.4° | 180.0° |
C32 | C34 | H13 | H14 | 120.0° | 120.0° |
C32 | C34 | C37 | H15 | 57.0° | 60.0° |
C32 | C34 | C37 | H16 | 176.2° | 59.9° |
O33 | C32 | C34 | C37 | 95.8° | 0.1° |
O33 | C32 | C34 | H13 | 144.1° | 120.0° |
O33 | C32 | C34 | H14 | 24.2° | 120.0° |
C34 | C37 | C40 | H15 | 120.4° | 120.0° |
C34 | C37 | C40 | H16 | 120.4° | 120.0° |
C34 | C37 | C40 | C49 | 79.2° | 90.3° |
C34 | C37 | C40 | C41 | 100.9° | 90.0° |
C37 | C34 | H13 | H14 | 119.9° | 120.0° |
C34 | C37 | H15 | H16 | 118.7° | 119.9° |
C37 | C40 | C49 | C41 | 179.9° | 179.7° |
C37 | C40 | C49 | C47 | 179.9° | 179.7° |
C37 | C40 | C41 | C43 | 180.0° | 180.0° |
C40 | C37 | C34 | H13 | 176.6° | 60.0° |
C40 | C37 | C34 | H14 | 56.7° | 59.9° |
C40 | C37 | H15 | H16 | 118.7° | 120.1° |
C37 | C40 | C41 | H17 | 0.1° | 0.1° |
C37 | C40 | C49 | H21 | 0.2° | 0.1° |
C40 | C49 | C47 | H21 | 180.0° | 179.6° |
C40 | C49 | C47 | C45 | 0.2° | 0.6° |
C49 | C40 | C41 | C43 | 0.1° | 0.3° |
C49 | C40 | C37 | H15 | 41.2° | 149.7° |
C49 | C40 | C37 | H16 | 160.4° | 29.7° |
C49 | C40 | C41 | H17 | 179.9° | 179.8° |
C40 | C49 | C47 | H20 | 179.8° | 179.7° |
C47 | C49 | C40 | C41 | 0.2° | 0.6° |
C49 | C47 | C45 | H20 | 180.0° | 179.7° |
C49 | C47 | C45 | C43 | 0.1° | 0.3° |
C49 | C47 | C45 | H19 | 180.0° | 179.7° |
C40 | C41 | C43 | H17 | 180.0° | 179.9° |
C40 | C41 | C43 | C45 | 0.0° | 0.0° |
C41 | C40 | C37 | H15 | 138.7° | 30.0° |
C41 | C40 | C37 | H16 | 19.5° | 150.0° |
C40 | C41 | C43 | H18 | 180.0° | 180.0° |
C41 | C40 | C49 | H21 | 179.7° | 179.8° |
C47 | C45 | C43 | C41 | 0.0° | 0.1° |
C47 | C45 | C43 | H19 | 180.0° | 180.0° |
C47 | C45 | C43 | H18 | 180.0° | 180.0° |
C45 | C47 | C49 | H21 | 179.8° | 179.8° |
C41 | C43 | C45 | H18 | 180.0° | 179.9° |
C41 | C43 | C45 | H19 | 179.9° | 180.0° |
C45 | C43 | C41 | H17 | 180.0° | 179.9° |
C43 | C45 | C47 | H20 | 179.9° | 180.0° |
H1 | C3 | C5 | H2 | 0.0° | 0.0° |
H2 | C5 | C7 | H3 | 0.2° | 0.1° |
H8 | C20 | C22 | H9 | 0.1° | 0.0° |
H9 | C22 | C24 | H10 | 0.0° | 0.1° |
H10 | C24 | C26 | H11 | 0.0° | 0.1° |
H13 | C34 | C37 | H15 | 63.0° | 180.0° |
H13 | C34 | C37 | H16 | 56.2° | 60.0° |
H14 | C34 | C37 | H15 | 177.1° | 60.1° |
H14 | C34 | C37 | H16 | 63.8° | 180.0° |
H17 | C41 | C43 | H18 | 0.0° | 0.0° |
H18 | C43 | C45 | H19 | 0.0° | 0.0° |
H19 | C45 | C47 | H20 | 0.1° | 0.0° |
H20 | C47 | C49 | H21 | 0.2° | 0.0° |