1X6
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
N | CA | sing | 1.47Å | 1.48Å | |
CA | C | sing | 1.51Å | 1.54Å | |
CA | CB | sing | 1.53Å | 1.53Å | |
C | O | doub | 1.21Å | 1.24Å | |
CB | OG | sing | 1.43Å | 1.42Å | |
OG | C7 | sing | 1.35Å | 1.33Å | |
C7 | O8 | doub | 1.22Å | 1.23Å | |
C7 | C6 | sing | 1.41Å | 1.47Å | |
C6 | C5 | doub | 1.35Å | 1.32Å | |
C5 | N4 | sing | 1.37Å | 1.32Å | |
C | OXT | sing | 1.34Å | 1.33Å | |
N | HN1 | sing | 1.01Å | 1.00Å | |
N | HN2 | sing | 1.01Å | 1.00Å | |
CA | HA | sing | 1.09Å | 1.10Å | |
CB | HB1C | sing | 1.09Å | 1.10Å | |
CB | HB2C | sing | 1.09Å | 1.10Å | |
C6 | H6 | sing | 1.08Å | 1.08Å | |
C5 | H5 | sing | 1.08Å | 1.08Å | |
N4 | H41N | sing | 0.97Å | 1.00Å | |
N4 | H42N | sing | 0.97Å | 1.00Å | |
OXT | HXT | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
N | CA | C | 115.1° | 109.5° |
N | CA | CB | 110.8° | 109.5° |
CA | N | HN1 | 109.5° | 111.0° |
CA | N | HN2 | 109.4° | 111.0° |
N | CA | HA | 104.4° | 109.4° |
C | CA | CB | 109.3° | 109.5° |
CA | C | O | 120.3° | 120.0° |
CA | C | OXT | 117.8° | 120.0° |
C | CA | HA | 106.2° | 109.5° |
CA | CB | OG | 111.5° | 109.5° |
CB | CA | HA | 110.9° | 109.5° |
CA | CB | HB1C | 108.8° | 109.4° |
CA | CB | HB2C | 108.8° | 109.4° |
O | C | OXT | 121.9° | 120.0° |
CB | OG | C7 | 131.0° | 116.9° |
OG | CB | HB1C | 108.8° | 109.5° |
OG | CB | HB2C | 108.8° | 109.5° |
OG | C7 | O8 | 111.0° | 120.1° |
OG | C7 | C6 | 129.9° | 120.0° |
O8 | C7 | C6 | 118.7° | 120.0° |
C7 | C6 | C5 | 115.9° | 120.0° |
C7 | C6 | H6 | 122.1° | 120.0° |
C6 | C5 | N4 | 121.4° | 120.0° |
C5 | C6 | H6 | 122.0° | 120.0° |
C6 | C5 | H5 | 119.3° | 120.0° |
N4 | C5 | H5 | 119.3° | 120.0° |
C5 | N4 | H41N | 109.5° | 120.0° |
C5 | N4 | H42N | 109.5° | 120.0° |
C | OXT | HXT | 109.5° | 117.0° |
HN1 | N | HN2 | 109.5° | 111.0° |
HB1C | CB | HB2C | 110.1° | 109.5° |
H41N | N4 | H42N | 109.5° | 120.0° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
N | CA | C | CB | 125.4° | 120.0° |
N | CA | C | HA | 115.0° | 119.9° |
N | CA | CB | HA | 115.5° | 120.0° |
N | CA | C | O | 172.4° | 20.0° |
N | CA | CB | OG | 64.0° | 65.0° |
N | CA | C | OXT | 7.5° | 160.0° |
CA | N | HN1 | HN2 | 120.0° | 124.0° |
N | CA | CB | HB1C | 56.0° | 55.0° |
N | CA | CB | HB2C | 176.0° | 175.0° |
C | CA | CB | HA | 116.7° | 120.0° |
CA | C | O | OXT | 179.9° | 179.9° |
C | CA | CB | OG | 168.2° | 175.0° |
C | CA | N | HN1 | 180.0° | 63.9° |
C | CA | N | HN2 | 60.0° | 60.0° |
C | CA | CB | HB1C | 71.8° | 65.0° |
C | CA | CB | HB2C | 48.1° | 54.9° |
CA | C | OXT | HXT | 179.9° | 180.0° |
CB | CA | C | O | 62.2° | 100.0° |
CA | CB | OG | HB1C | 120.0° | 119.9° |
CA | CB | OG | HB2C | 120.0° | 120.0° |
CA | CB | OG | C7 | 87.0° | 180.0° |
CB | CA | C | OXT | 117.9° | 79.9° |
CB | CA | N | HN1 | 55.3° | 176.0° |
CB | CA | N | HN2 | 175.4° | 60.0° |
CA | CB | HB1C | HB2C | 119.1° | 119.9° |
O | C | CA | HA | 57.4° | 140.0° |
O | C | OXT | HXT | 0.0° | 0.1° |
CB | OG | C7 | O8 | 7.0° | 0.0° |
CB | OG | C7 | C6 | 166.0° | 180.0° |
OG | CB | CA | HA | 51.5° | 55.0° |
OG | CB | HB1C | HB2C | 119.2° | 120.1° |
OG | C7 | O8 | C6 | 173.9° | 180.0° |
OG | C7 | C6 | C5 | 165.2° | 180.0° |
C7 | OG | CB | HB1C | 33.0° | 60.1° |
C7 | OG | CB | HB2C | 153.0° | 60.0° |
OG | C7 | C6 | H6 | 14.8° | 0.0° |
O8 | C7 | C6 | C5 | 7.3° | 0.0° |
O8 | C7 | C6 | H6 | 172.7° | 180.0° |
C7 | C6 | C5 | H6 | 180.0° | 180.0° |
C7 | C6 | C5 | N4 | 179.4° | 180.0° |
C7 | C6 | C5 | H5 | 0.6° | 0.1° |
C6 | C5 | N4 | H5 | 180.0° | 179.9° |
C6 | C5 | N4 | H41N | 180.0° | 0.1° |
C6 | C5 | N4 | H42N | 60.0° | 180.0° |
N4 | C5 | C6 | H6 | 0.6° | 0.0° |
C5 | N4 | H41N | H42N | 120.0° | 179.9° |
OXT | C | CA | HA | 122.5° | 40.1° |
HN1 | N | CA | HA | 64.1° | 56.0° |
HN2 | N | CA | HA | 56.0° | 180.0° |
HA | CA | CB | HB1C | 171.5° | 175.0° |
HA | CA | CB | HB2C | 68.5° | 65.1° |
H6 | C6 | C5 | H5 | 179.4° | 179.9° |
H5 | C5 | N4 | H41N | 0.0° | 180.0° |
H5 | C5 | N4 | H42N | 120.0° | 0.1° |