Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1VT

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C17C16doub1.38Å1.39ÅAromatic
C17C12sing1.38Å1.40ÅAromatic
OC10doub1.21Å1.26Å
C16C15sing1.38Å1.40ÅAromatic
SC18sing1.75Å1.78ÅAromatic
SC09sing1.70Å1.78ÅAromatic
C25C12sing1.51Å1.52Å
C25N23sing1.47Å1.48Å
C12C13doub1.38Å1.40ÅAromatic
C18C19doub1.34Å1.34ÅAromatic
C15C14doub1.38Å1.40ÅAromatic
C10C11sing1.51Å1.47Å
C10Nsing1.35Å1.36Å
C11C2sing1.53Å1.52Å
C2N23sing1.47Å1.47Å
C13C14sing1.38Å1.40ÅAromatic
C09Nsing1.39Å1.37Å
C09C01doub1.37Å1.33ÅAromatic
C19C01sing1.45Å1.48ÅAromatic
C19C20sing1.48Å1.50Å
C01C02sing1.46Å1.47Å
C20C21doub1.39Å1.41ÅAromatic
C20Csing1.39Å1.40ÅAromatic
C21C22sing1.38Å1.39ÅAromatic
CC24doub1.38Å1.40ÅAromatic
C22C23doub1.38Å1.40ÅAromatic
C24C23sing1.38Å1.40ÅAromatic
N01C02sing1.35Å1.36Å
N01C1sing1.46Å1.47Å
C02O01doub1.22Å1.25Å
C1C03sing1.51Å1.54Å
C08C03doub1.38Å1.40ÅAromatic
C08C07sing1.38Å1.40ÅAromatic
C03C04sing1.38Å1.40ÅAromatic
C07C06doub1.38Å1.40ÅAromatic
C04C05doub1.38Å1.40ÅAromatic
C06C05sing1.38Å1.39ÅAromatic
N01H1sing0.97Å1.00Å
C1H2sing1.09Å1.10Å
C1H3sing1.09Å1.10Å
C04H4sing1.08Å1.08Å
C05H5sing1.08Å1.08Å
C06H6sing1.08Å1.08Å
C07H7sing1.08Å1.08Å
C08H8sing1.08Å1.08Å
NH9sing0.97Å1.00Å
C11H10sing1.09Å1.10Å
C11H11sing1.09Å1.10Å
C2H12sing1.09Å1.10Å
C2H13sing1.09Å1.10Å
N23H14sing1.01Å1.00Å
C25H16sing1.09Å1.10Å
C25H17sing1.09Å1.10Å
C13H18sing1.08Å1.08Å
C14H19sing1.08Å1.08Å
C15H20sing1.08Å1.08Å
C16H21sing1.08Å1.08Å
C17H22sing1.08Å1.08Å
C18H23sing1.08Å1.08Å
C21H24sing1.08Å1.08Å
C22H25sing1.08Å1.08Å
C23H26sing1.08Å1.08Å
C24H27sing1.08Å1.08Å
CH28sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C16C17C12120.4°120.0°
C17C16C15119.3°120.0°
C17C16H21120.4°120.0°
C16C17H22119.8°120.0°
C17C12C25115.3°120.0°
C17C12C13120.9°120.0°
C12C17H22119.8°120.0°
OC10C11116.1°120.0°
OC10N121.8°120.0°
C16C15C14119.9°119.9°
C16C15H20120.0°120.0°
C15C16H21120.3°120.0°
C18SC0990.0°92.7°
SC18C19111.5°110.7°
SC18H23124.2°124.7°
SC09N118.8°124.5°
SC09C01112.6°111.0°
C12C25N23116.5°109.5°
C25C12C13123.9°120.0°
C12C25H16107.7°109.5°
C12C25H17107.7°109.5°
C25N23C2107.9°111.0°
C25N23H14109.9°110.9°
N23C25H16107.7°109.5°
N23C25H17107.7°109.4°
C12C13C14118.4°120.0°
C12C13H18120.8°120.0°
C18C19C01113.9°112.8°
C18C19C20122.0°123.6°
C19C18H23124.2°124.7°
C15C14C13121.1°120.0°
C15C14H19119.4°120.0°
C14C15H20120.0°120.0°
C11C10N122.0°120.0°
C10C11C2107.4°109.5°
C10C11H10110.0°109.5°
C10C11H11110.0°109.4°
C10NC09128.6°120.0°
C10NH9115.7°120.0°
C11C2N23108.7°109.5°
C2C11H10110.0°109.5°
C2C11H11110.0°109.5°
C11C2H12109.6°109.4°
C11C2H13109.7°109.5°
N23C2H12109.7°109.5°
N23C2H13109.7°109.5°
C2N23H14109.8°111.0°
C14C13H18120.8°120.0°
C13C14H19119.5°120.0°
NC09C01128.6°124.5°
C09NH9115.7°120.0°
C09C01C19112.1°112.8°
C09C01C02121.6°123.6°
C01C19C20124.2°123.6°
C19C01C02126.2°123.6°
C19C20C21120.0°120.1°
C19C20C119.3°120.1°
C01C02N01117.5°120.0°
C01C02O01116.6°119.9°
C21C20C120.6°119.7°
C20C21C22119.3°119.8°
C20C21H24120.4°120.1°
C20CC24119.4°119.9°
C20CH28120.3°120.1°
C21C22C23120.3°120.2°
C22C21H24120.3°120.1°
C21C22H25119.8°119.9°
CC24C23120.3°120.1°
CC24H27119.9°120.0°
C24CH28120.3°120.0°
C22C23C24120.0°120.3°
C23C22H25119.8°119.9°
C22C23H26120.0°119.9°
C24C23H26120.0°119.9°
C23C24H27119.9°120.0°
C02N01C1122.7°120.0°
N01C02O01125.8°120.0°
C02N01H1118.6°120.0°
N01C1C03108.6°109.5°
C1N01H1118.7°120.0°
N01C1H2109.7°109.5°
N01C1H3109.7°109.5°
C1C03C08121.0°120.0°
C1C03C04120.0°120.0°
C03C1H2109.7°109.5°
C03C1H3109.7°109.4°
C03C08C07120.0°120.0°
C08C03C04119.0°120.0°
C03C08H8120.0°120.0°
C08C07C06120.1°120.0°
C08C07H7120.0°120.0°
C07C08H8120.0°120.0°
C03C04C05121.1°120.0°
C03C04H4119.5°120.0°
C07C06C05120.7°120.0°
C07C06H6119.7°120.0°
C06C07H7120.0°120.0°
C04C05C06119.1°120.0°
C05C04H4119.5°120.0°
C04C05H5120.4°120.0°
C06C05H5120.5°120.0°
C05C06H6119.6°120.0°
H2C1H3109.5°109.4°
H10C11H11109.5°109.4°
H12C2H13109.5°109.5°
H16C25H17109.5°109.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C16C17C12H22180.0°179.6°
C17C16C15H21180.0°179.8°
C16C17C12C25179.9°179.7°
C16C17C12C130.3°0.4°
C17C16C15C140.9°0.3°
C17C16C15H20179.1°179.8°
C12C17C16C150.1°0.4°
C17C12C25C13179.8°179.8°
C17C12C25N23145.7°90.2°
C17C12C13C140.1°0.3°
C17C12C25H1693.3°149.8°
C17C12C25H1724.7°29.8°
C17C12C13H18180.0°179.8°
C12C17C16H21179.9°179.8°
OC10C11N177.2°180.0°
OC10C11C261.4°0.0°
OC10NC090.3°0.0°
OC10NH9179.7°179.9°
OC10C11H10178.9°120.0°
OC10C11H1158.3°120.0°
C16C15C14H20180.0°180.0°
C16C15C14C131.2°0.1°
C16C15C14H19178.8°180.0°
C15C16C17H22179.9°180.0°
SC18C19H23180.0°179.8°
C18SC09N179.7°180.0°
C18SC09C010.8°0.0°
SC18C19C010.8°0.4°
SC18C19C20179.2°180.0°
C09SC18C190.0°0.2°
SC09NC1060.6°0.0°
SC09NC01178.7°180.0°
SC09C01C191.4°0.3°
SC09C01C02177.7°180.0°
SC09NH9119.4°179.9°
C09SC18H23180.0°180.0°
C12C25N23H16121.0°120.1°
C12C25N23H17121.0°120.0°
C12C25N23C2159.4°180.0°
C25C12C13C14179.7°179.9°
C12C25N23H1439.7°56.1°
C12C25H16H17116.8°120.0°
C25C12C13H180.3°0.0°
C25C12C17H220.1°0.2°
N23C25C12C1334.1°90.0°
C25N23C2C1170.8°179.9°
C25N23C2H14119.7°123.8°
C25N23C2H1249.1°60.0°
C25N23C2H13169.4°60.1°
N23C25H16H17116.8°119.9°
C12C13C14C150.8°0.1°
C12C13C14H18180.0°179.9°
C13C12C25H1686.9°30.1°
C13C12C25H17155.1°150.0°
C12C13C14H19179.2°180.0°
C13C12C17H22179.7°180.0°
C18C19C01C091.4°0.4°
C18C19C01C20179.9°179.6°
C18C19C01C02177.5°179.8°
C18C19C20C2146.2°50.1°
C18C19C20C132.6°129.7°
C15C14C13H19180.0°179.9°
C15C14C13H18179.2°180.0°
C14C15C16H21179.1°180.0°
C10C11C2H10119.7°120.0°
C10C11C2H11119.7°120.0°
C10C11C2N23177.4°180.0°
C11C10NC09176.8°180.0°
C11C10NH93.2°0.1°
C10C11H10H11121.0°119.9°
C10C11C2H1257.5°60.0°
C10C11C2H1362.7°60.0°
NC10C11C2121.4°180.0°
C10NC09H9180.0°179.9°
C10NC09C01118.1°180.0°
NC10C11H101.7°60.0°
NC10C11H11119.0°60.0°
C11C2N23H12119.8°120.0°
C11C2N23H13119.9°120.0°
C2C11H10H11121.0°120.0°
C11C2H12H13120.3°120.0°
C11C2N23H1449.0°56.1°
N23C2C11H1063.0°60.0°
N23C2C11H1157.7°60.0°
N23C2H12H13120.4°120.0°
C2N23C25H1679.5°59.9°
C2N23C25H1738.4°60.0°
C13C14C15H20178.8°180.0°
NC09C01C19179.9°179.8°
NC09C01C023.6°0.0°
C09C01C19C02176.1°179.7°
C09C01C19C20178.5°180.0°
C09C01C02N0166.7°89.9°
C09C01C02O01110.4°90.1°
C01C09NH961.9°0.1°
C01C19C20C21133.7°129.5°
C01C19C20C47.4°50.8°
C19C01C02N01117.6°89.7°
C19C01C02O0165.3°90.3°
C01C19C18H23179.2°179.8°
C20C19C01C022.4°0.2°
C19C20C21C178.8°179.7°
C19C20C21C22179.8°179.9°
C19C20CC24179.8°179.7°
C20C19C18H230.8°0.2°
C19C20C21H240.2°0.0°
C19C20CH280.2°0.0°
C01C02N01O01176.8°180.0°
C01C02N01C1178.6°180.0°
C01C02N01H11.4°0.1°
C20C21C22H24180.0°179.9°
C21C20CC241.0°0.6°
C20C21C22C231.9°0.1°
C20C21C22H25178.1°180.0°
C21C20CH28179.0°179.7°
CC20C21C221.4°0.3°
C20CC24H28180.0°179.7°
C20CC24C230.9°0.6°
CC20C21H24178.6°179.8°
C20CC24H27179.1°179.7°
C21C22C23H25180.0°179.9°
C21C22C23C241.8°0.1°
C21C22C23H26178.2°180.0°
CC24C23C221.3°0.4°
CC24C23H27180.0°179.7°
CC24C23H26178.7°179.7°
C22C23C24H26180.0°180.0°
C23C22C21H24178.2°180.0°
C22C23C24H27178.7°180.0°
C24C23C22H25178.2°180.0°
C23C24CH28179.1°179.7°
C02N01C1H1180.0°179.9°
C02N01C1C03100.0°180.0°
C02N01C1H2140.1°60.0°
C02N01C1H319.9°60.0°
C1N01C02O011.8°0.0°
N01C1C03H2119.9°120.0°
N01C1C03H3119.9°120.0°
N01C1C03C08110.0°90.3°
N01C1C03C0470.1°90.0°
N01C1H2H3120.4°120.0°
O01C02N01H1178.2°179.9°
C1C03C08C04179.9°179.7°
C1C03C08C07178.9°179.7°
C1C03C04C05179.6°180.0°
C03C1N01H180.0°0.0°
C03C1H2H3120.4°119.9°
C1C03C04H40.4°0.1°
C1C03C08H81.1°0.1°
C03C08C07H8180.0°179.6°
C03C08C07C061.6°0.7°
C08C03C04C050.3°0.3°
C08C03C1H29.9°149.7°
C08C03C1H3130.1°29.7°
C08C03C04H4179.7°179.8°
C03C08C07H7178.4°179.7°
C07C08C03C041.2°0.6°
C08C07C06H7180.0°179.7°
C08C07C06C050.5°0.3°
C08C07C06H6179.5°179.7°
C03C04C05H4180.0°179.9°
C03C04C05C061.4°0.0°
C04C03C1H2170.0°30.0°
C04C03C1H349.7°149.9°
C03C04C05H5178.6°179.9°
C04C03C08H8178.7°179.8°
C07C06C05C041.0°0.0°
C07C06C05H6180.0°180.0°
C07C06C05H5179.0°179.9°
C06C07C08H8178.3°179.7°
C04C05C06H5180.0°179.9°
C04C05C06H6179.0°180.0°
C06C05C04H4178.6°179.9°
C05C06C07H7179.5°180.0°
H1N01C1H239.9°120.0°
H1N01C1H3160.1°120.0°
H4C04C05H51.4°0.0°
H5C05C06H61.0°0.0°
H6C06C07H70.5°0.0°
H7C07C08H81.7°0.1°
H10C11C2H12177.2°180.0°
H10C11C2H1356.9°60.0°
H11C11C2H1262.2°60.0°
H11C11C2H13177.6°180.0°
H12C2N23H14168.8°63.9°
H13C2N23H1470.9°176.1°
H14N23C25H16160.7°64.0°
H14N23C25H1781.3°176.1°
H18C13C14H190.8°0.1°
H19C14C15H201.2°0.0°
H20C15C16H210.9°0.0°
H21C16C17H220.1°0.2°
H24C21C22H251.9°0.1°
H25C22C23H261.8°0.1°
H26C23C24H271.3°0.0°
H27C24CH280.9°0.0°

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon