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SummaryGeometryRelated PDB entries

1V6

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
CACCABdoub1.38Å1.37ÅAromatic
CACCAEsing1.38Å1.38ÅAromatic
CABCADsing1.38Å1.41ÅAromatic
CAECAOdoub1.38Å1.40ÅAromatic
CADCAFdoub1.38Å1.38ÅAromatic
CAGCAIdoub1.38Å1.41ÅAromatic
CAGCAPsing1.38Å1.38ÅAromatic
CAICAQsing1.39Å1.40ÅAromatic
CAOCAFsing1.38Å1.38ÅAromatic
CAOCALsing1.51Å1.44Å
NAACARsing1.39Å1.33Å
NAMCARdoub1.30Å1.37ÅAromatic
NAMCASsing1.33Å1.33ÅAromatic
CALCAPsing1.51Å1.46Å
CARSANsing1.76Å1.67ÅAromatic
CAPCAHdoub1.38Å1.39ÅAromatic
CAQCASsing1.48Å1.39Å
CAQCAJdoub1.39Å1.38ÅAromatic
CASCAKdoub1.34Å1.33ÅAromatic
CAHCAJsing1.38Å1.39ÅAromatic
SANCAKsing1.76Å1.85ÅAromatic
CAEH1sing1.08Å1.08Å
CACH2sing1.08Å1.08Å
CABH3sing1.08Å1.08Å
CADH4sing1.08Å1.08Å
CAFH5sing1.08Å1.08Å
CALH6sing1.09Å1.10Å
CALH7sing1.09Å1.10Å
CAHH8sing1.08Å1.08Å
CAJH9sing1.08Å1.08Å
CAGH10sing1.08Å1.08Å
CAIH11sing1.08Å1.08Å
NAAH12sing0.97Å1.00Å
NAAH13sing0.97Å1.00Å
CAKH14sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
CABCACCAE122.5°120.0°
CACCABCAD117.4°120.1°
CABCACH2118.8°120.0°
CACCABH3121.3°120.0°
CACCAECAO119.8°120.0°
CACCAEH1120.1°120.0°
CAECACH2118.8°120.0°
CABCADCAF120.3°120.0°
CADCABH3121.3°120.0°
CABCADH4119.8°120.0°
CAECAOCAF117.8°120.0°
CAECAOCAL122.6°120.0°
CAOCAEH1120.1°120.0°
CADCAFCAO121.1°120.0°
CAFCADH4119.9°120.0°
CADCAFH5119.4°120.0°
CAICAGCAP120.3°120.1°
CAGCAICAQ124.8°119.9°
CAICAGH10119.9°120.0°
CAGCAIH11117.6°120.1°
CAGCAPCAL123.6°119.8°
CAGCAPCAH114.8°120.3°
CAPCAGH10119.9°119.9°
CAICAQCAS125.2°120.1°
CAICAQCAJ113.7°119.7°
CAQCAIH11117.6°120.0°
CAFCAOCAL118.5°120.0°
CAOCAFH5119.4°120.1°
CAOCALCAP119.8°109.5°
CAOCALH6106.9°109.5°
CAOCALH7106.9°109.5°
NAACARNAM129.8°125.2°
NAACARSAN117.0°125.3°
CARNAAH12109.5°120.0°
CARNAAH13109.5°120.0°
CARNAMCAS116.9°116.8°
NAMCARSAN112.8°109.5°
NAMCASCAQ125.9°122.3°
NAMCASCAK111.2°115.3°
CALCAPCAH121.4°119.9°
CAPCALH6106.8°109.4°
CAPCALH7106.8°109.5°
CARSANCAK87.2°90.1°
CAPCAHCAJ124.7°120.1°
CAPCAHH8117.7°119.9°
CASCAQCAJ120.5°120.2°
CAQCASCAK122.9°122.4°
CAQCAJCAH121.4°119.9°
CAQCAJH9119.3°120.0°
CASCAKSAN111.8°108.3°
CASCAKH14124.1°125.8°
CAJCAHH8117.6°120.0°
CAHCAJH9119.3°120.1°
SANCAKH14124.1°125.9°
H6CALH7109.5°109.5°
H12NAAH13109.5°120.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
CABCACCAEH2180.0°180.0°
CACCABCADH3180.0°180.0°
CABCACCAECAO0.7°0.0°
CACCABCADCAF0.3°0.0°
CABCACCAEH1179.4°179.7°
CACCABCADH4179.7°179.9°
CAECACCABCAD4.4°0.0°
CACCAECAOH1180.0°179.8°
CACCAECAOCAF7.7°0.1°
CACCAECAOCAL175.6°179.7°
CAECACCABH3175.6°180.0°
CABCADCAFH4180.0°179.9°
CABCADCAFCAO8.9°0.1°
CADCABCACH2175.6°180.0°
CABCADCAFH5171.1°179.9°
CAECAOCAFCAD12.5°0.1°
CAECAOCAFCAL168.3°179.6°
CAECAOCALCAP115.0°90.0°
CAOCAECACH2179.4°179.9°
CAECAOCAFH5167.5°180.0°
CAECAOCALH66.5°150.0°
CAECAOCALH7123.6°30.0°
CADCAFCAOH5180.0°179.9°
CADCAFCAOCAL179.2°179.8°
CAFCADCABH3179.7°180.0°
CAICAGCAPH10180.0°179.9°
CAGCAICAQH11180.0°179.9°
CAICAGCAPCAL177.5°179.9°
CAICAGCAPCAH2.6°0.2°
CAGCAICAQCAS177.1°180.0°
CAGCAICAQCAJ5.6°0.4°
CAPCAGCAICAQ2.2°0.2°
CAGCAPCALCAO38.3°90.3°
CAGCAPCALCAH174.5°179.7°
CAGCAPCAHCAJ4.0°0.3°
CAGCAPCALH683.2°149.8°
CAGCAPCALH7159.8°29.7°
CAGCAPCAHH8176.1°179.8°
CAPCAGCAIH11177.8°180.0°
CAICAQCASNAM32.6°0.4°
CAICAQCASCAJ171.0°179.6°
CAICAQCASCAK145.2°180.0°
CAICAQCAJCAH4.2°0.4°
CAICAQCAJH9175.8°179.7°
CAQCAICAGH10177.8°180.0°
CAFCAOCALCAP77.3°90.3°
CAFCAOCAEH1172.3°179.7°
CAOCAFCADH4171.1°179.9°
CAFCAOCALH6161.3°29.6°
CAFCAOCALH744.2°149.6°
CAOCALCAPH6121.5°120.0°
CAOCALCAPH7121.5°120.0°
CAOCALCAPCAH136.2°90.0°
CALCAOCAEH14.4°0.0°
CALCAOCAFH50.8°0.4°
CAOCALH6H7115.4°120.0°
NAACARNAMSAN172.8°180.0°
NAACARNAMCAS177.1°180.0°
NAACARSANCAK176.7°179.8°
CARNAAH12H13120.0°179.9°
CARNAMCASCAQ178.7°180.0°
CARNAMCASCAK3.2°0.3°
NAMCARSANCAK2.8°0.2°
NAMCARNAAH120.0°0.1°
NAMCARNAAH13120.0°180.0°
CASNAMCARSAN4.2°0.0°
NAMCASCAQCAK177.8°179.6°
NAMCASCAQCAJ156.4°180.0°
NAMCASCAKSAN0.9°0.4°
NAMCASCAKH14179.1°179.7°
CALCAPCAHCAJ179.0°180.0°
CAPCALH6H7115.3°120.0°
CALCAPCAHH81.1°0.1°
CALCAPCAGH102.5°0.1°
CARSANCAKCAS1.1°0.3°
SANCARNAAH12172.6°179.9°
SANCARNAAH1367.4°0.0°
CARSANCAKH14178.9°179.8°
CAPCAHCAJCAQ0.4°0.0°
CAPCAHCAJH8180.0°179.9°
CAHCAPCALH6102.3°29.9°
CAHCAPCALH714.8°150.0°
CAPCAHCAJH9179.6°179.9°
CAHCAPCAGH10177.4°179.6°
CASCAQCAJCAH176.1°179.9°
CAQCASCAKSAN179.0°179.9°
CASCAQCAJH93.9°0.2°
CASCAQCAIH112.9°0.1°
CAQCASCAKH141.0°0.0°
CAJCAQCASCAK25.8°0.4°
CAQCAJCAHH9180.0°179.9°
CAQCAJCAHH8179.6°179.9°
CAJCAQCAIH11174.4°179.7°
CASCAKSANH14180.0°179.9°
H1CAECACH20.6°0.3°
H2CACCABH34.4°0.0°
H3CABCADH40.3°0.1°
H4CADCAFH59.0°0.0°
H8CAHCAJH90.4°0.0°
H10CAGCAIH112.2°0.1°

248335

PDB entries from 2026-01-28

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