Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1UD

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C19N18sing1.47Å1.45Å
C22O21sing1.43Å1.42Å
O21C20sing1.43Å1.42Å
N18C17sing1.38Å1.35Å
C20C27sing1.55Å1.53Å
C20O23sing1.44Å1.43Å
C27O28sing1.43Å1.43Å
C27C25sing1.55Å1.53Å
C17N16doub1.31Å1.31ÅAromatic
C17N15sing1.36Å1.37ÅAromatic
O23C24sing1.44Å1.43Å
N16C4sing1.36Å1.37ÅAromatic
C25C24sing1.55Å1.52Å
C25O26sing1.43Å1.43Å
N15C3sing1.39Å1.37ÅAromatic
C24C7sing1.53Å1.53Å
C7C6sing1.53Å1.52Å
C4C3doub1.41Å1.39ÅAromatic
C4C5sing1.39Å1.41ÅAromatic
O26C26sing1.43Å1.42Å
C6C5sing1.51Å1.51Å
C3C2sing1.38Å1.39ÅAromatic
C5C8doub1.39Å1.42ÅAromatic
C2C1doub1.39Å1.40ÅAromatic
C8C1sing1.42Å1.41ÅAromatic
C8N9sing1.36Å1.41Å
C1C13sing1.47Å1.47Å
N9C10doub1.31Å1.30Å
C13O14doub1.22Å1.23Å
C13N12sing1.35Å1.37Å
C10N12sing1.37Å1.37Å
C10N11sing1.37Å1.35Å
C2H1sing1.08Å1.08Å
C6H2sing1.09Å1.10Å
C6H3sing1.09Å1.10Å
C7H4sing1.09Å1.10Å
C7H5sing1.09Å1.10Å
N11H6sing0.97Å1.00Å
N11H7sing0.97Å1.00Å
N12H8sing0.97Å1.00Å
N15H9sing0.97Å1.00Å
N18H11sing0.97Å1.00Å
C19H12sing1.09Å1.10Å
C19H13sing1.09Å1.10Å
C19H14sing1.09Å1.10Å
C20H15sing1.09Å1.10Å
C22H16sing1.09Å1.10Å
C22H17sing1.09Å1.10Å
C22H18sing1.09Å1.10Å
C24H19sing1.09Å1.10Å
C25H20sing1.09Å1.10Å
C26H21sing1.09Å1.10Å
C26H22sing1.09Å1.10Å
C26H23sing1.09Å1.10Å
C27H24sing1.09Å1.10Å
O28H25sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C19N18C17119.2°120.0°
C19N18H11107.0°120.0°
N18C19H12109.5°109.4°
N18C19H13109.5°109.5°
N18C19H14109.4°109.5°
C22O21C20112.0°114.0°
O21C22H16109.5°109.5°
O21C22H17109.5°109.5°
O21C22H18109.5°109.5°
O21C20C27110.8°110.4°
O21C20O23107.8°110.4°
O21C20H15111.3°110.4°
N18C17N16128.0°125.0°
N18C17N15121.3°125.0°
C17N18H11107.0°120.0°
C27C20O23106.0°104.8°
C20C27O28108.7°110.5°
C20C27C25105.2°104.0°
C27C20H15109.8°110.4°
C20C27H24110.5°110.5°
C20O23C24105.6°105.3°
O23C20H15111.2°110.3°
O28C27C25109.8°110.5°
O28C27H24112.0°110.5°
C27O28H25109.5°114.0°
C27C25C24102.8°104.1°
C27C25O26112.3°110.5°
C27C25H20110.9°110.6°
C25C27H24110.4°110.6°
N16C17N15110.7°110.0°
C17N16C4106.1°109.8°
C17N15C3108.3°107.2°
C17N15H9125.9°126.5°
O23C24C25105.8°104.8°
O23C24C7108.0°110.4°
O23C24H19109.8°110.4°
N16C4C3110.4°107.0°
N16C4C5129.1°132.8°
C24C25O26106.7°110.5°
C25C24C7116.2°110.4°
C25C24H19108.5°110.5°
C24C25H20111.1°110.5°
C25O26C26115.2°114.0°
O26C25H20112.6°110.5°
N15C3C4104.5°106.0°
N15C3C2131.7°133.4°
C3N15H9125.8°126.3°
C24C7C6108.5°109.4°
C24C7H4109.7°109.5°
C24C7H5109.7°109.5°
C7C24H19108.4°110.3°
C7C6C5116.2°109.4°
C7C6H2107.7°109.5°
C7C6H3107.8°109.4°
C6C7H4109.7°109.5°
C6C7H5109.7°109.5°
C3C4C5120.5°120.2°
C4C3C2123.8°120.5°
C4C5C6120.4°120.2°
C4C5C8117.1°119.6°
O26C26H21109.5°109.5°
O26C26H22109.4°109.4°
O26C26H23109.5°109.5°
C6C5C8122.5°120.2°
C5C6H2107.8°109.4°
C5C6H3107.7°109.5°
C3C2C1115.7°119.5°
C3C2H1122.1°120.3°
C5C8C1120.2°119.7°
C5C8N9119.3°121.2°
C2C1C8122.7°120.4°
C2C1C13118.6°121.5°
C1C2H1122.2°120.2°
C1C8N9120.6°119.0°
C8C1C13118.6°118.1°
C8N9C10119.2°121.5°
C1C13O14122.7°121.2°
C1C13N12115.0°117.7°
N9C10N12122.6°123.1°
N9C10N11121.3°118.4°
O14C13N12122.3°121.2°
C13N12C10124.0°120.6°
C13N12H8118.0°119.7°
N12C10N11116.1°118.4°
C10N12H8118.0°119.7°
C10N11H6120.0°120.1°
C10N11H7120.0°120.0°
H2C6H3109.5°109.5°
H4C7H5109.5°109.5°
H6N11H7120.0°119.9°
H12C19H13109.5°109.5°
H12C19H14109.4°109.5°
H13C19H14109.5°109.5°
H16C22H17109.5°109.4°
H16C22H18109.5°109.5°
H17C22H18109.5°109.4°
H21C26H22109.4°109.5°
H21C26H23109.5°109.5°
H22C26H23109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C19N18C17H11121.4°180.0°
C19N18C17N1612.4°180.0°
C19N18C17N15167.1°0.0°
N18C19H12H13120.0°120.0°
N18C19H12H14120.0°120.0°
N18C19H13H14120.0°120.0°
C22O21C20C27157.4°175.0°
C22O21C20O2387.1°69.6°
C22O21C20H1535.0°52.7°
O21C22H16H17120.0°120.1°
O21C22H16H18120.0°120.0°
O21C22H17H18120.0°120.0°
O21C20C27O23116.6°118.9°
O21C20C27H15123.2°122.3°
O21C20O23H15122.2°122.3°
O21C20C27O28110.4°98.5°
O21C20C27C25132.1°142.8°
O21C20O23C24152.7°159.4°
C20O21C22H16180.0°60.0°
C20O21C22H1760.0°60.0°
C20O21C22H1860.0°180.0°
O21C20C27H2412.9°24.1°
N18C17N16N15179.6°180.0°
N18C17N16C4179.9°180.0°
N18C17N15C3179.7°180.0°
N18C17N15H90.3°0.0°
C17N18C19H12180.0°60.0°
C17N18C19H1360.0°60.0°
C17N18C19H1460.0°180.0°
C27C20O23H15119.2°118.8°
C20C27O28C25114.6°114.6°
C20C27O28H24122.4°122.6°
C20C27C25H24119.2°118.7°
C27C20O23C2434.1°40.5°
C20C27C25C247.7°0.0°
C20C27C25O26122.0°118.6°
C20C27C25H20111.1°118.7°
C20C27O28H25180.0°61.5°
O23C20C27O28132.9°142.6°
O23C20C27C2515.4°24.0°
C20O23C24C2539.7°40.5°
C20O23C24C7164.7°159.3°
C20O23C24H1977.3°78.4°
O23C20C27H24103.8°94.8°
O28C27C25H24123.9°122.7°
O28C27C25C24109.1°118.6°
O28C27C25O265.1°0.0°
O28C27C20H1512.8°23.8°
O28C27C25H20132.1°122.7°
C27C25C24O2328.5°24.0°
C27C25C24O26118.3°118.6°
C27C25C24H20118.7°118.8°
C27C25O26H20126.0°122.8°
C27C25C24C7148.3°142.8°
C27C25O26C2695.1°95.3°
C25C27C20H15104.7°94.8°
C27C25C24H1989.3°94.9°
C25C27O28H2565.5°176.1°
N16C17N15C30.0°0.0°
C17N16C4C30.8°0.0°
C17N16C4C5179.4°180.0°
N16C17N15H9179.9°180.0°
N16C17N18H11109.0°0.0°
N15C17N16C40.5°0.0°
C17N15C3H9180.0°180.0°
C17N15C3C40.4°0.0°
C17N15C3C2179.5°180.0°
N15C17N18H1171.5°180.0°
O23C24C25C7119.8°118.8°
O23C24C25H19117.8°118.9°
O23C24C25O26146.7°142.6°
O23C24C7H19118.9°122.3°
O23C24C7C664.7°66.5°
O23C24C7H4175.4°53.6°
O23C24C7H555.1°173.5°
C24O23C20H1585.1°78.3°
O23C24C25H2090.2°94.8°
N16C4C3N150.8°0.0°
N16C4C3C5179.9°179.9°
N16C4C5C61.7°0.1°
N16C4C3C2179.1°180.0°
N16C4C5C8178.6°179.7°
C24C25O26H20122.1°122.6°
C25C24C7H19122.5°122.4°
C25C24C7C6176.6°178.2°
C24C25O26C26153.0°150.0°
C25C24C7H456.8°61.8°
C25C24C7H563.5°58.2°
C24C25C27H24126.9°118.7°
O26C25C24C793.5°98.6°
O26C25C24H1929.0°23.7°
C25O26C26H21180.0°60.0°
C25O26C26H2260.0°60.0°
C25O26C26H2360.0°180.0°
O26C25C27H24118.8°122.7°
N15C3C4C2179.9°180.0°
N15C3C4C5179.4°180.0°
N15C3C2C1179.6°179.9°
N15C3C2H10.4°0.0°
C24C7C6H4119.8°120.0°
C24C7C6H5119.9°120.0°
C24C7C6C5179.3°180.0°
C24C7C6H259.8°60.0°
C24C7C6H358.3°60.1°
C24C7H4H5120.5°120.0°
C7C24C25H2029.6°24.0°
C7C6C5C487.1°90.0°
C7C6C5H2121.0°120.0°
C7C6C5H3121.0°119.9°
C7C6C5C896.1°89.8°
C7C6H2H3116.9°120.0°
C6C7H4H5120.4°120.0°
C6C7C24H1954.2°55.8°
C3C4C5C6178.1°180.0°
C3C4C5C81.2°0.2°
C4C3C2C10.3°0.0°
C4C3C2H1179.7°179.9°
C4C3N15H9179.6°180.0°
C4C5C6C8176.8°179.8°
C5C4C3C20.7°0.1°
C4C5C8C10.8°0.5°
C4C5C8N9179.6°180.0°
C4C5C6H233.9°150.0°
C4C5C6H3151.9°29.9°
C26O26C25H2030.9°27.5°
O26C26H21H22120.0°119.9°
O26C26H21H23120.0°120.0°
O26C26H22H23120.0°120.0°
C6C5C8C1177.6°179.7°
C6C5C8N92.8°0.2°
C5C6H2H3116.9°120.0°
C5C6C7H459.4°60.0°
C5C6C7H560.9°60.0°
C3C2C1H1180.0°179.9°
C3C2C1C80.7°0.3°
C3C2C1C13178.0°179.9°
C2C3N15H90.5°0.0°
C5C8C1C20.2°0.6°
C5C8C1N9179.6°179.5°
C5C8C1C13178.5°179.8°
C5C8N9C10178.1°179.9°
C8C5C6H2142.9°30.2°
C8C5C6H324.9°150.3°
C2C1C8C13178.7°179.6°
C2C1C8N9179.4°179.9°
C2C1C13O140.3°0.1°
C2C1C13N12179.1°179.2°
C1C8N9C102.3°0.6°
C8C1C13O14179.0°179.7°
C8C1C13N120.3°0.4°
C8C1C2H1179.3°179.8°
N9C8C1C131.9°0.3°
C8N9C10N121.1°0.1°
C8N9C10N11179.5°180.0°
C1C13O14N12179.3°179.3°
C1C13N12C100.9°0.9°
C13C1C2H12.0°0.2°
C1C13N12H8179.1°179.9°
N9C10N12C130.5°0.7°
N9C10N12N11179.4°180.0°
N9C10N11H60.0°0.1°
N9C10N11H7180.0°180.0°
N9C10N12H8179.4°179.9°
O14C13N12C10179.8°179.8°
O14C13N12H80.2°0.6°
C13N12C10H8180.0°179.2°
C13N12C10N11178.9°179.2°
N12C10N11H6179.4°179.9°
N12C10N11H70.6°0.0°
C10N11H6H7180.0°179.9°
N11C10N12H81.2°0.0°
H2C6C7H4179.6°180.0°
H2C6C7H560.1°60.0°
H3C6C7H461.5°59.9°
H3C6C7H5178.2°180.0°
H4C7C24H1965.7°175.8°
H5C7C24H19174.0°64.2°
H11N18C19H1258.6°120.0°
H11N18C19H1361.4°120.0°
H11N18C19H14178.6°0.0°
H12C19H13H14120.0°120.1°
H15C20C27H24136.1°146.4°
H16C22H17H18120.0°119.9°
H19C24C25H20152.0°146.3°
H20C25C27H248.1°0.0°
H21C26H22H23120.0°120.1°
H24C27O28H2557.6°61.1°

227111

PDB entries from 2024-11-06

PDB statisticsPDBj update infoContact PDBjnumon