1TL
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| OP1 | P | doub | 1.48Å | 1.52Å | |
| OP3 | P | sing | 1.61Å | 1.58Å | |
| P | O5' | sing | 1.61Å | 1.56Å | |
| P | OP2 | sing | 1.61Å | 1.51Å | |
| C1' | N1 | sing | 1.47Å | 1.46Å | |
| N1 | C6 | sing | 1.37Å | 1.35Å | |
| N1 | C2 | sing | 1.35Å | 1.35Å | |
| O2 | C2 | doub | 1.22Å | 1.35Å | |
| C2 | N3 | sing | 1.35Å | 1.34Å | |
| N3 | C4 | sing | 1.35Å | 1.35Å | |
| C5 | C4 | sing | 1.42Å | 1.41Å | |
| C4 | O4 | doub | 1.22Å | 1.25Å | |
| C6 | C5 | doub | 1.35Å | 1.40Å | |
| C5 | H5 | sing | 1.08Å | 1.08Å | |
| C6 | H6 | sing | 1.08Å | 1.08Å | |
| O4' | C1' | sing | 1.44Å | 1.43Å | |
| C1' | C2' | sing | 1.56Å | 1.54Å | |
| C1' | H1' | sing | 1.09Å | 1.10Å | |
| O2A | C2' | sing | 1.46Å | 1.43Å | |
| C3' | C2' | sing | 1.57Å | 1.51Å | |
| C2' | H2' | sing | 1.09Å | 1.10Å | |
| C6' | O2A | sing | 1.44Å | 1.44Å | |
| C4' | C3' | sing | 1.57Å | 1.51Å | |
| O3' | C3' | sing | 1.43Å | 1.45Å | |
| C3' | H3' | sing | 1.09Å | 1.10Å | |
| O3' | HO3' | sing | 0.97Å | 0.95Å | |
| C5' | C4' | sing | 1.53Å | 1.51Å | |
| C6' | C4' | sing | 1.59Å | 1.51Å | |
| C4' | O4' | sing | 1.46Å | 1.45Å | |
| C5' | O5' | sing | 1.43Å | 1.41Å | |
| C5' | H5' | sing | 1.09Å | 1.10Å | |
| C5' | H5'A | sing | 1.09Å | 1.10Å | |
| C7' | C6' | sing | 1.53Å | 1.53Å | |
| C6' | H6' | sing | 1.09Å | 1.10Å | |
| C7' | H7' | sing | 1.09Å | 1.10Å | |
| C7' | H7'A | sing | 1.09Å | 1.10Å | |
| C7' | H7'B | sing | 1.09Å | 1.10Å | |
| OP2 | HOP2 | sing | 0.97Å | 0.95Å | |
| OP3 | HOP3 | sing | 0.97Å | 0.95Å | |
| N3 | HN3 | sing | 0.97Å | 1.00Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| OP1 | P | OP3 | 101.8° | 109.5° |
| OP1 | P | O5' | 109.9° | 109.4° |
| OP1 | P | OP2 | 116.9° | 109.5° |
| OP3 | P | O5' | 108.2° | 109.4° |
| OP3 | P | OP2 | 111.3° | 109.5° |
| P | OP3 | HOP3 | 109.5° | 114.0° |
| O5' | P | OP2 | 108.4° | 109.5° |
| P | O5' | C5' | 117.6° | 123.0° |
| P | OP2 | HOP2 | 109.5° | 114.0° |
| C1' | N1 | C6 | 122.6° | 119.7° |
| C1' | N1 | C2 | 116.7° | 119.7° |
| N1 | C1' | O4' | 108.8° | 110.3° |
| N1 | C1' | C2' | 113.3° | 110.2° |
| N1 | C1' | H1' | 111.0° | 110.3° |
| C6 | N1 | C2 | 120.5° | 120.6° |
| N1 | C6 | C5 | 119.9° | 119.7° |
| N1 | C6 | H6 | 120.0° | 120.1° |
| N1 | C2 | O2 | 121.6° | 119.6° |
| N1 | C2 | N3 | 121.4° | 120.9° |
| O2 | C2 | N3 | 117.0° | 119.5° |
| C2 | N3 | C4 | 120.3° | 120.3° |
| C2 | N3 | HN3 | 119.9° | 119.9° |
| N3 | C4 | C5 | 120.1° | 119.4° |
| N3 | C4 | O4 | 118.3° | 120.3° |
| C4 | N3 | HN3 | 119.9° | 119.9° |
| C5 | C4 | O4 | 121.2° | 120.3° |
| C4 | C5 | C6 | 117.5° | 119.1° |
| C4 | C5 | H5 | 121.2° | 120.5° |
| C6 | C5 | H5 | 121.2° | 120.5° |
| C5 | C6 | H6 | 120.1° | 120.1° |
| O4' | C1' | C2' | 102.2° | 105.3° |
| O4' | C1' | H1' | 111.4° | 110.4° |
| C1' | O4' | C4' | 105.4° | 107.0° |
| C2' | C1' | H1' | 109.8° | 110.3° |
| C1' | C2' | O2A | 106.7° | 103.8° |
| C1' | C2' | C3' | 101.4° | 99.0° |
| C1' | C2' | H2' | 114.4° | 116.5° |
| O2A | C2' | C3' | 101.1° | 102.0° |
| O2A | C2' | H2' | 116.4° | 116.3° |
| C2' | O2A | C6' | 108.3° | 107.0° |
| C3' | C2' | H2' | 115.0° | 116.7° |
| C2' | C3' | C4' | 90.5° | 93.2° |
| C2' | C3' | O3' | 109.9° | 112.6° |
| C2' | C3' | H3' | 112.9° | 112.5° |
| O2A | C6' | C4' | 99.2° | 105.0° |
| O2A | C6' | C7' | 108.6° | 110.3° |
| O2A | C6' | H6' | 111.8° | 110.3° |
| C4' | C3' | O3' | 114.8° | 112.7° |
| C4' | C3' | H3' | 112.8° | 112.5° |
| C3' | C4' | C5' | 116.1° | 116.7° |
| C3' | C4' | C6' | 105.0° | 98.9° |
| C3' | C4' | O4' | 101.3° | 101.2° |
| O3' | C3' | H3' | 113.8° | 112.1° |
| C3' | O3' | HO3' | 109.5° | 114.0° |
| C5' | C4' | C6' | 115.8° | 117.7° |
| C5' | C4' | O4' | 110.2° | 116.3° |
| C4' | C5' | O5' | 103.9° | 109.4° |
| C4' | C5' | H5' | 110.9° | 109.5° |
| C4' | C5' | H5'A | 110.8° | 109.5° |
| C6' | C4' | O4' | 107.3° | 103.2° |
| C4' | C6' | C7' | 115.7° | 110.2° |
| C4' | C6' | H6' | 110.6° | 110.7° |
| O5' | C5' | H5' | 110.8° | 109.4° |
| O5' | C5' | H5'A | 110.8° | 109.5° |
| H5' | C5' | H5'A | 109.5° | 109.5° |
| C7' | C6' | H6' | 110.4° | 110.3° |
| C6' | C7' | H7' | 109.5° | 109.4° |
| C6' | C7' | H7'A | 109.5° | 109.5° |
| C6' | C7' | H7'B | 109.5° | 109.5° |
| H7' | C7' | H7'A | 109.5° | 109.4° |
| H7' | C7' | H7'B | 109.4° | 109.5° |
| H7'A | C7' | H7'B | 109.5° | 109.5° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| OP1 | P | OP3 | O5' | 115.7° | 119.9° |
| OP1 | P | OP3 | OP2 | 125.3° | 120.1° |
| OP1 | P | O5' | OP2 | 128.8° | 120.0° |
| OP1 | P | O5' | C5' | 40.7° | 55.1° |
| OP1 | P | OP2 | HOP2 | 0.0° | 180.0° |
| OP1 | P | OP3 | HOP3 | 0.0° | 60.0° |
| OP3 | P | O5' | OP2 | 120.8° | 120.0° |
| OP3 | P | O5' | C5' | 69.7° | 175.0° |
| OP3 | P | OP2 | HOP2 | 116.3° | 60.0° |
| P | O5' | C5' | C4' | 163.6° | 180.0° |
| P | O5' | C5' | H5' | 44.5° | 60.1° |
| P | O5' | C5' | H5'A | 77.3° | 59.9° |
| O5' | P | OP2 | HOP2 | 124.8° | 60.0° |
| O5' | P | OP3 | HOP3 | 115.7° | 179.9° |
| OP2 | P | O5' | C5' | 169.5° | 64.9° |
| OP2 | P | OP3 | HOP3 | 125.3° | 60.0° |
| C1' | N1 | C6 | C2 | 175.2° | 179.7° |
| C1' | N1 | C2 | O2 | 3.3° | 0.3° |
| C1' | N1 | C2 | N3 | 177.3° | 179.7° |
| C1' | N1 | C6 | C5 | 176.2° | 179.7° |
| C1' | N1 | C6 | H6 | 3.9° | 0.3° |
| N1 | C1' | O4' | C2' | 120.1° | 118.9° |
| N1 | C1' | O4' | H1' | 122.7° | 122.1° |
| N1 | C1' | C2' | H1' | 124.7° | 122.0° |
| N1 | C1' | C2' | O2A | 170.7° | 168.3° |
| N1 | C1' | C2' | C3' | 83.9° | 86.9° |
| N1 | C1' | C2' | H2' | 40.5° | 39.1° |
| N1 | C1' | O4' | C4' | 125.3° | 122.3° |
| C6 | N1 | C2 | O2 | 178.7° | 180.0° |
| C6 | N1 | C2 | N3 | 1.8° | 0.0° |
| N1 | C6 | C5 | C4 | 2.6° | 0.1° |
| N1 | C6 | C5 | H6 | 180.0° | 180.0° |
| N1 | C6 | C5 | H5 | 177.4° | 180.0° |
| C6 | N1 | C1' | O4' | 16.0° | 20.9° |
| C6 | N1 | C1' | C2' | 96.9° | 95.0° |
| C6 | N1 | C1' | H1' | 139.0° | 143.1° |
| N1 | C2 | O2 | N3 | 179.5° | 180.0° |
| N1 | C2 | N3 | C4 | 1.2° | 0.0° |
| C2 | N1 | C6 | C5 | 1.0° | 0.0° |
| C2 | N1 | C6 | H6 | 179.0° | 180.0° |
| C2 | N1 | C1' | O4' | 159.3° | 158.8° |
| C2 | N1 | C1' | C2' | 87.7° | 85.4° |
| C2 | N1 | C1' | H1' | 36.4° | 36.6° |
| N1 | C2 | N3 | HN3 | 178.8° | 179.9° |
| O2 | C2 | N3 | C4 | 178.3° | 180.0° |
| O2 | C2 | N3 | HN3 | 1.7° | 0.1° |
| C2 | N3 | C4 | HN3 | 180.0° | 179.9° |
| C2 | N3 | C4 | C5 | 4.9° | 0.0° |
| C2 | N3 | C4 | O4 | 178.0° | 180.0° |
| N3 | C4 | C5 | O4 | 172.9° | 180.0° |
| N3 | C4 | C5 | C6 | 5.5° | 0.0° |
| N3 | C4 | C5 | H5 | 174.5° | 180.0° |
| C4 | C5 | C6 | H5 | 180.0° | 179.9° |
| C4 | C5 | C6 | H6 | 177.4° | 179.9° |
| C5 | C4 | N3 | HN3 | 175.1° | 179.9° |
| O4 | C4 | C5 | C6 | 178.5° | 179.9° |
| O4 | C4 | C5 | H5 | 1.5° | 0.0° |
| O4 | C4 | N3 | HN3 | 1.9° | 0.1° |
| H5 | C5 | C6 | H6 | 2.6° | 0.0° |
| O4' | C1' | C2' | H1' | 118.3° | 119.1° |
| O4' | C1' | C2' | O2A | 72.4° | 72.7° |
| O4' | C1' | C2' | C3' | 33.0° | 32.1° |
| O4' | C1' | C2' | H2' | 157.4° | 158.0° |
| C1' | O4' | C4' | C3' | 41.7° | 37.8° |
| C1' | O4' | C4' | C5' | 165.1° | 165.2° |
| C1' | O4' | C4' | C6' | 68.1° | 64.3° |
| C1' | C2' | O2A | C3' | 105.6° | 102.6° |
| C1' | C2' | O2A | H2' | 129.1° | 129.3° |
| C1' | C2' | C3' | H2' | 124.0° | 125.8° |
| C1' | C2' | O2A | C6' | 63.9° | 64.6° |
| C1' | C2' | C3' | C4' | 54.4° | 51.0° |
| C1' | C2' | C3' | O3' | 171.1° | 167.2° |
| C1' | C2' | C3' | H3' | 60.7° | 65.0° |
| C2' | C1' | O4' | C4' | 5.1° | 3.4° |
| H1' | C1' | C2' | O2A | 46.0° | 46.4° |
| H1' | C1' | C2' | C3' | 151.4° | 151.2° |
| H1' | C1' | C2' | H2' | 84.3° | 82.9° |
| H1' | C1' | O4' | C4' | 112.1° | 115.7° |
| O2A | C2' | C3' | H2' | 126.2° | 127.9° |
| O2A | C2' | C3' | C4' | 55.4° | 55.2° |
| O2A | C2' | C3' | O3' | 61.3° | 60.9° |
| O2A | C2' | C3' | H3' | 170.5° | 171.3° |
| C2' | O2A | C6' | C4' | 6.6° | 3.6° |
| C2' | O2A | C6' | C7' | 127.8° | 122.3° |
| C2' | O2A | C6' | H6' | 110.1° | 115.6° |
| C3' | C2' | O2A | C6' | 41.7° | 38.0° |
| C2' | C3' | C4' | O3' | 112.2° | 116.1° |
| C2' | C3' | C4' | H3' | 115.2° | 116.0° |
| C2' | C3' | O3' | H3' | 127.7° | 128.0° |
| C2' | C3' | O3' | HO3' | 180.0° | 61.4° |
| C2' | C3' | C4' | C5' | 178.0° | 177.7° |
| C2' | C3' | C4' | C6' | 52.9° | 50.4° |
| C2' | C3' | C4' | O4' | 58.7° | 55.1° |
| H2' | C2' | O2A | C6' | 167.0° | 166.1° |
| H2' | C2' | C3' | C4' | 178.4° | 176.8° |
| H2' | C2' | C3' | O3' | 64.9° | 67.0° |
| H2' | C2' | C3' | H3' | 63.3° | 60.8° |
| O2A | C6' | C4' | C3' | 30.8° | 31.6° |
| O2A | C6' | C4' | C5' | 160.2° | 158.2° |
| O2A | C6' | C4' | C7' | 115.9° | 118.7° |
| O2A | C6' | C4' | H6' | 117.5° | 119.0° |
| O2A | C6' | C4' | O4' | 76.4° | 72.2° |
| O2A | C6' | C7' | H6' | 122.9° | 122.0° |
| O2A | C6' | C7' | H7' | 180.0° | 58.6° |
| O2A | C6' | C7' | H7'A | 60.0° | 178.5° |
| O2A | C6' | C7' | H7'B | 60.0° | 61.4° |
| C4' | C3' | O3' | H3' | 132.1° | 128.1° |
| C4' | C3' | O3' | HO3' | 79.8° | 165.2° |
| C3' | C4' | C5' | C6' | 123.8° | 117.4° |
| C3' | C4' | C5' | O4' | 114.3° | 119.4° |
| C3' | C4' | C6' | O4' | 107.2° | 103.8° |
| C3' | C4' | C5' | O5' | 53.3° | 175.0° |
| C3' | C4' | C5' | H5' | 172.4° | 55.0° |
| C3' | C4' | C5' | H5'A | 65.8° | 65.0° |
| C3' | C4' | C6' | C7' | 85.1° | 87.1° |
| C3' | C4' | C6' | H6' | 148.3° | 150.6° |
| O3' | C3' | C4' | C5' | 69.8° | 61.6° |
| O3' | C3' | C4' | C6' | 59.4° | 65.7° |
| O3' | C3' | C4' | O4' | 170.9° | 171.2° |
| H3' | C3' | O3' | HO3' | 52.3° | 66.7° |
| H3' | C3' | C4' | C5' | 62.7° | 66.3° |
| H3' | C3' | C4' | C6' | 168.1° | 166.4° |
| H3' | C3' | C4' | O4' | 56.5° | 60.9° |
| C5' | C4' | C6' | O4' | 123.4° | 129.6° |
| C4' | C5' | O5' | H5' | 119.2° | 120.0° |
| C4' | C5' | O5' | H5'A | 119.1° | 120.0° |
| C4' | C5' | H5' | H5'A | 122.6° | 120.1° |
| C5' | C4' | C6' | C7' | 44.2° | 39.5° |
| C5' | C4' | C6' | H6' | 82.3° | 82.8° |
| C6' | C4' | C5' | O5' | 177.1° | 57.5° |
| C6' | C4' | C5' | H5' | 63.8° | 62.4° |
| C6' | C4' | C5' | H5'A | 58.0° | 177.5° |
| C4' | C6' | C7' | H6' | 126.6° | 122.5° |
| C4' | C6' | C7' | H7' | 69.5° | 56.8° |
| C4' | C6' | C7' | H7'A | 170.4° | 63.1° |
| C4' | C6' | C7' | H7'B | 50.4° | 176.8° |
| O4' | C4' | C5' | O5' | 61.0° | 65.7° |
| O4' | C4' | C5' | H5' | 58.1° | 174.4° |
| O4' | C4' | C5' | H5'A | 179.9° | 54.3° |
| O4' | C4' | C6' | C7' | 167.7° | 169.1° |
| O4' | C4' | C6' | H6' | 41.1° | 46.8° |
| O5' | C5' | H5' | H5'A | 122.6° | 120.0° |
| C6' | C7' | H7' | H7'A | 120.0° | 120.0° |
| C6' | C7' | H7' | H7'B | 120.0° | 120.0° |
| C6' | C7' | H7'A | H7'B | 120.0° | 120.1° |
| H6' | C6' | C7' | H7' | 57.1° | 179.4° |
| H6' | C6' | C7' | H7'A | 62.9° | 59.4° |
| H6' | C6' | C7' | H7'B | 177.1° | 60.6° |
| H7' | C7' | H7'A | H7'B | 119.9° | 120.0° |
