1PU
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| C1 | C2 | sing | 1.50Å | 1.52Å | |
| C1 | C3 | doub | 1.40Å | 1.43Å | Aromatic |
| C1 | C4 | sing | 1.38Å | 1.41Å | Aromatic |
| C2 | C6 | sing | 1.54Å | 1.54Å | |
| C2 | N5 | sing | 1.48Å | 1.46Å | |
| C2 | H2 | sing | 1.09Å | 1.12Å | |
| C3 | C7 | sing | 1.48Å | 1.46Å | |
| C3 | C8 | sing | 1.39Å | 1.41Å | Aromatic |
| C7 | N5 | sing | 1.34Å | 1.35Å | |
| C7 | O13 | doub | 1.21Å | 1.21Å | |
| C6 | C12 | sing | 1.55Å | 1.54Å | |
| C6 | H61 | sing | 1.09Å | 1.11Å | |
| C6 | H62 | sing | 1.09Å | 1.11Å | |
| C4 | C9 | doub | 1.39Å | 1.41Å | Aromatic |
| C4 | N10 | sing | 1.40Å | 1.45Å | |
| N5 | C11 | sing | 1.47Å | 1.47Å | |
| C8 | C14 | doub | 1.38Å | 1.39Å | Aromatic |
| C8 | H8 | sing | 1.08Å | 1.10Å | |
| C9 | C14 | sing | 1.38Å | 1.40Å | Aromatic |
| C9 | H9 | sing | 1.08Å | 1.10Å | |
| N10 | C15 | sing | 1.35Å | 1.32Å | |
| N10 | H10 | sing | 0.97Å | 1.02Å | |
| C11 | C12 | sing | 1.55Å | 1.54Å | |
| C11 | H111 | sing | 1.09Å | 1.11Å | |
| C11 | H112 | sing | 1.09Å | 1.12Å | |
| C12 | H121 | sing | 1.09Å | 1.12Å | |
| C12 | H122 | sing | 1.09Å | 1.12Å | |
| C14 | H14 | sing | 1.08Å | 1.10Å | |
| C15 | N16 | sing | 1.35Å | 1.33Å | |
| C15 | O17 | doub | 1.22Å | 1.23Å | |
| N16 | C18 | sing | 1.39Å | 1.42Å | |
| N16 | H16 | sing | 0.97Å | 1.02Å | |
| C18 | C19 | doub | 1.39Å | 1.40Å | Aromatic |
| C18 | N20 | sing | 1.32Å | 1.33Å | Aromatic |
| C19 | C21 | sing | 1.38Å | 1.41Å | Aromatic |
| C19 | H19 | sing | 1.08Å | 1.10Å | |
| N20 | C22 | doub | 1.32Å | 1.33Å | Aromatic |
| C21 | C23 | doub | 1.39Å | 1.40Å | Aromatic |
| C21 | H21 | sing | 1.08Å | 1.10Å | |
| C22 | C23 | sing | 1.38Å | 1.40Å | Aromatic |
| C22 | H22 | sing | 1.08Å | 1.10Å | |
| C23 | H23 | sing | 1.08Å | 1.10Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| C2 | C1 | C3 | 107.2° | 106.1° |
| C2 | C1 | C4 | 132.3° | 133.8° |
| C1 | C2 | C6 | 118.8° | 112.0° |
| C1 | C2 | N5 | 102.0° | 105.3° |
| C1 | C2 | H2 | 105.7° | 111.8° |
| C3 | C1 | C4 | 120.5° | 120.1° |
| C1 | C3 | C7 | 109.6° | 108.0° |
| C1 | C3 | C8 | 120.9° | 119.4° |
| C1 | C4 | C9 | 117.3° | 119.9° |
| C1 | C4 | N10 | 119.3° | 120.0° |
| C6 | C2 | N5 | 99.1° | 104.3° |
| C6 | C2 | H2 | 108.4° | 111.4° |
| C2 | C6 | C12 | 103.9° | 104.6° |
| C2 | C6 | H61 | 114.3° | 110.4° |
| C2 | C6 | H62 | 114.3° | 110.5° |
| N5 | C2 | H2 | 123.7° | 111.6° |
| C2 | N5 | C7 | 114.9° | 107.4° |
| C2 | N5 | C11 | 115.3° | 104.0° |
| C7 | C3 | C8 | 129.5° | 132.6° |
| C3 | C7 | N5 | 106.2° | 109.4° |
| C3 | C7 | O13 | 125.6° | 125.3° |
| C3 | C8 | C14 | 118.3° | 120.1° |
| C3 | C8 | H8 | 121.5° | 119.9° |
| N5 | C7 | O13 | 128.1° | 125.3° |
| C7 | N5 | C11 | 123.0° | 148.6° |
| C12 | C6 | H61 | 114.3° | 110.4° |
| C12 | C6 | H62 | 114.3° | 110.3° |
| C6 | C12 | C11 | 105.7° | 104.9° |
| C6 | C12 | H121 | 113.6° | 110.3° |
| C6 | C12 | H122 | 113.6° | 110.4° |
| H61 | C6 | H62 | 96.1° | 110.4° |
| C9 | C4 | N10 | 123.5° | 120.1° |
| C4 | C9 | C14 | 121.8° | 120.1° |
| C4 | C9 | H9 | 119.3° | 119.9° |
| C4 | N10 | C15 | 133.2° | 120.0° |
| C4 | N10 | H10 | 104.0° | 120.0° |
| N5 | C11 | C12 | 101.6° | 104.2° |
| N5 | C11 | H111 | 115.2° | 110.4° |
| N5 | C11 | H112 | 115.2° | 110.6° |
| C14 | C8 | H8 | 120.2° | 120.0° |
| C8 | C14 | C9 | 121.2° | 120.4° |
| C8 | C14 | H14 | 118.8° | 119.8° |
| C14 | C9 | H9 | 118.9° | 120.0° |
| C9 | C14 | H14 | 120.0° | 119.8° |
| C15 | N10 | H10 | 104.1° | 120.0° |
| N10 | C15 | N16 | 116.6° | 120.0° |
| N10 | C15 | O17 | 121.4° | 119.9° |
| C12 | C11 | H111 | 115.2° | 110.4° |
| C12 | C11 | H112 | 115.2° | 110.5° |
| C11 | C12 | H121 | 113.6° | 110.4° |
| C11 | C12 | H122 | 113.6° | 110.4° |
| H111 | C11 | H112 | 95.3° | 110.5° |
| H121 | C12 | H122 | 96.8° | 110.4° |
| N16 | C15 | O17 | 122.0° | 120.1° |
| C15 | N16 | C18 | 133.1° | 120.0° |
| C15 | N16 | H16 | 108.9° | 120.0° |
| C18 | N16 | H16 | 118.0° | 119.9° |
| N16 | C18 | C19 | 123.9° | 119.7° |
| N16 | C18 | N20 | 115.8° | 119.7° |
| C19 | C18 | N20 | 120.4° | 120.6° |
| C18 | C19 | C21 | 118.1° | 119.1° |
| C18 | C19 | H19 | 120.4° | 120.5° |
| C18 | N20 | C22 | 122.8° | 121.6° |
| C21 | C19 | H19 | 121.5° | 120.4° |
| C19 | C21 | C23 | 120.0° | 118.5° |
| C19 | C21 | H21 | 120.4° | 120.8° |
| N20 | C22 | C23 | 120.8° | 120.8° |
| N20 | C22 | H22 | 117.3° | 119.5° |
| C23 | C21 | H21 | 119.7° | 120.8° |
| C21 | C23 | C22 | 118.0° | 119.4° |
| C21 | C23 | H23 | 121.2° | 120.3° |
| C23 | C22 | H22 | 122.0° | 119.6° |
| C22 | C23 | H23 | 120.8° | 120.3° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| C2 | C1 | C3 | C4 | 179.6° | 179.4° |
| C1 | C2 | C6 | N5 | 109.2° | 113.4° |
| C1 | C2 | C6 | H2 | 120.5° | 126.1° |
| C1 | C2 | N5 | H2 | 118.4° | 121.5° |
| C2 | C1 | C3 | C7 | 0.1° | 0.0° |
| C2 | C1 | C3 | C8 | 179.9° | 179.2° |
| C1 | C2 | N5 | C7 | 0.0° | 19.2° |
| C1 | C2 | C6 | C12 | 146.0° | 139.0° |
| C1 | C2 | C6 | H61 | 20.7° | 20.2° |
| C1 | C2 | C6 | H62 | 88.8° | 102.3° |
| C2 | C1 | C4 | C9 | 179.9° | 179.9° |
| C2 | C1 | C4 | N10 | 0.0° | 0.1° |
| C1 | C2 | N5 | C11 | 152.1° | 159.9° |
| C3 | C1 | C2 | C6 | 107.6° | 123.9° |
| C3 | C1 | C2 | N5 | 0.0° | 11.1° |
| C3 | C1 | C2 | H2 | 130.5° | 110.2° |
| C1 | C3 | C7 | C8 | 179.8° | 179.1° |
| C1 | C3 | C7 | N5 | 0.1° | 12.7° |
| C1 | C3 | C7 | O13 | 180.0° | 167.4° |
| C3 | C1 | C4 | C9 | 0.6° | 1.0° |
| C3 | C1 | C4 | N10 | 179.4° | 179.3° |
| C1 | C3 | C8 | C14 | 0.2° | 1.0° |
| C1 | C3 | C8 | H8 | 179.8° | 179.0° |
| C4 | C1 | C2 | C6 | 72.8° | 55.4° |
| C4 | C1 | C2 | N5 | 179.6° | 168.1° |
| C4 | C1 | C2 | H2 | 49.0° | 70.5° |
| C4 | C1 | C3 | C7 | 179.7° | 179.4° |
| C4 | C1 | C3 | C8 | 0.5° | 1.4° |
| C1 | C4 | C9 | N10 | 180.0° | 179.7° |
| C1 | C4 | C9 | C14 | 0.4° | 0.2° |
| C1 | C4 | C9 | H9 | 179.7° | 179.8° |
| C1 | C4 | N10 | C15 | 178.4° | 155.6° |
| C1 | C4 | N10 | H10 | 53.2° | 24.4° |
| C6 | C2 | N5 | H2 | 119.4° | 120.4° |
| C6 | C2 | N5 | C7 | 122.2° | 137.3° |
| C2 | C6 | C12 | H61 | 125.3° | 118.8° |
| C2 | C6 | C12 | H62 | 125.3° | 118.8° |
| C2 | C6 | H61 | H62 | 120.2° | 122.5° |
| C6 | C2 | N5 | C11 | 29.9° | 41.7° |
| C2 | C6 | C12 | C11 | 33.3° | 1.1° |
| C2 | C6 | C12 | H121 | 158.6° | 119.9° |
| C2 | C6 | C12 | H122 | 91.9° | 117.7° |
| C2 | N5 | C7 | C3 | 0.1° | 19.6° |
| C2 | N5 | C7 | C11 | 149.7° | 178.2° |
| C2 | N5 | C7 | O13 | 179.9° | 160.4° |
| N5 | C2 | C6 | C12 | 36.7° | 25.7° |
| N5 | C2 | C6 | H61 | 88.6° | 93.1° |
| N5 | C2 | C6 | H62 | 162.0° | 144.4° |
| C2 | N5 | C11 | C12 | 9.8° | 40.8° |
| C2 | N5 | C11 | H111 | 115.5° | 159.5° |
| C2 | N5 | C11 | H112 | 135.1° | 77.9° |
| H2 | C2 | N5 | C7 | 118.4° | 102.3° |
| H2 | C2 | C6 | C12 | 93.5° | 94.9° |
| H2 | C2 | C6 | H61 | 141.2° | 146.3° |
| H2 | C2 | C6 | H62 | 31.8° | 23.8° |
| H2 | C2 | N5 | C11 | 89.5° | 78.7° |
| C3 | C7 | N5 | O13 | 179.8° | 180.0° |
| C3 | C7 | N5 | C11 | 149.8° | 158.6° |
| C7 | C3 | C8 | C14 | 180.0° | 180.0° |
| C7 | C3 | C8 | H8 | 0.1° | 0.0° |
| C8 | C3 | C7 | N5 | 179.9° | 168.3° |
| C8 | C3 | C7 | O13 | 0.3° | 11.7° |
| C3 | C8 | C14 | H8 | 180.0° | 180.0° |
| C3 | C8 | C14 | C9 | 0.0° | 0.2° |
| C3 | C8 | C14 | H14 | 180.0° | 179.7° |
| C7 | N5 | C11 | C12 | 139.8° | 137.4° |
| C7 | N5 | C11 | H111 | 94.9° | 18.7° |
| C7 | N5 | C11 | H112 | 14.5° | 103.9° |
| O13 | C7 | N5 | C11 | 30.3° | 21.4° |
| C12 | C6 | H61 | H62 | 120.2° | 122.3° |
| C6 | C12 | C11 | N5 | 15.1° | 24.0° |
| C6 | C12 | C11 | H121 | 125.3° | 118.8° |
| C6 | C12 | C11 | H122 | 125.3° | 118.9° |
| C6 | C12 | C11 | H111 | 140.4° | 142.6° |
| C6 | C12 | C11 | H112 | 110.1° | 94.8° |
| C6 | C12 | H121 | H122 | 119.5° | 122.3° |
| H61 | C6 | C12 | C11 | 91.9° | 117.7° |
| H61 | C6 | C12 | H121 | 33.3° | 1.1° |
| H61 | C6 | C12 | H122 | 142.8° | 123.5° |
| H62 | C6 | C12 | C11 | 158.6° | 119.9° |
| H62 | C6 | C12 | H121 | 76.1° | 121.3° |
| H62 | C6 | C12 | H122 | 33.3° | 1.1° |
| C4 | C9 | C14 | C8 | 0.1° | 0.2° |
| C4 | C9 | C14 | H9 | 180.0° | 180.0° |
| C9 | C4 | N10 | C15 | 1.6° | 24.7° |
| C9 | C4 | N10 | H10 | 126.8° | 155.3° |
| C4 | C9 | C14 | H14 | 180.0° | 179.9° |
| N10 | C4 | C9 | C14 | 179.7° | 179.9° |
| N10 | C4 | C9 | H9 | 0.3° | 0.1° |
| C4 | N10 | C15 | H10 | 125.2° | 180.0° |
| C4 | N10 | C15 | N16 | 177.1° | 174.1° |
| C4 | N10 | C15 | O17 | 3.5° | 6.1° |
| N5 | C11 | C12 | H111 | 125.3° | 118.6° |
| N5 | C11 | C12 | H112 | 125.2° | 118.8° |
| N5 | C11 | H111 | H112 | 121.1° | 122.7° |
| N5 | C11 | C12 | H121 | 140.4° | 94.8° |
| N5 | C11 | C12 | H122 | 110.2° | 142.9° |
| C8 | C14 | C9 | H14 | 180.0° | 179.9° |
| C8 | C14 | C9 | H9 | 180.0° | 179.8° |
| H8 | C8 | C14 | C9 | 180.0° | 179.8° |
| H8 | C8 | C14 | H14 | 0.0° | 0.3° |
| H9 | C9 | C14 | H14 | 0.0° | 0.1° |
| N10 | C15 | N16 | O17 | 179.4° | 179.8° |
| N10 | C15 | N16 | C18 | 8.9° | 175.2° |
| N10 | C15 | N16 | H16 | 171.1° | 4.9° |
| H10 | N10 | C15 | N16 | 51.8° | 5.9° |
| H10 | N10 | C15 | O17 | 128.8° | 174.0° |
| C12 | C11 | H111 | H112 | 121.1° | 122.6° |
| C11 | C12 | H121 | H122 | 119.5° | 122.3° |
| H111 | C11 | C12 | H121 | 94.3° | 23.8° |
| H111 | C11 | C12 | H122 | 15.1° | 98.5° |
| H112 | C11 | C12 | H121 | 15.1° | 146.4° |
| H112 | C11 | C12 | H122 | 124.6° | 24.1° |
| C15 | N16 | C18 | H16 | 180.0° | 179.9° |
| C15 | N16 | C18 | C19 | 168.3° | 175.0° |
| C15 | N16 | C18 | N20 | 11.5° | 4.7° |
| O17 | C15 | N16 | C18 | 170.5° | 5.0° |
| O17 | C15 | N16 | H16 | 9.5° | 175.0° |
| N16 | C18 | C19 | N20 | 179.8° | 179.7° |
| N16 | C18 | C19 | C21 | 179.6° | 180.0° |
| N16 | C18 | C19 | H19 | 0.4° | 0.1° |
| N16 | C18 | N20 | C22 | 179.7° | 179.8° |
| H16 | N16 | C18 | C19 | 11.7° | 5.1° |
| H16 | N16 | C18 | N20 | 168.5° | 175.2° |
| C18 | C19 | C21 | H19 | 180.0° | 179.9° |
| C19 | C18 | N20 | C22 | 0.1° | 0.6° |
| C18 | C19 | C21 | C23 | 0.1° | 0.1° |
| C18 | C19 | C21 | H21 | 179.9° | 179.9° |
| N20 | C18 | C19 | C21 | 0.2° | 0.3° |
| N20 | C18 | C19 | H19 | 179.8° | 179.7° |
| C18 | N20 | C22 | C23 | 0.1° | 0.6° |
| C18 | N20 | C22 | H22 | 180.0° | 179.7° |
| C19 | C21 | C23 | H21 | 180.0° | 180.0° |
| C19 | C21 | C23 | C22 | 0.1° | 0.1° |
| C19 | C21 | C23 | H23 | 179.9° | 180.0° |
| H19 | C19 | C21 | C23 | 179.9° | 180.0° |
| H19 | C19 | C21 | H21 | 0.1° | 0.0° |
| N20 | C22 | C23 | C21 | 0.2° | 0.3° |
| N20 | C22 | C23 | H22 | 180.0° | 179.8° |
| N20 | C22 | C23 | H23 | 179.8° | 179.8° |
| C21 | C23 | C22 | H23 | 180.0° | 179.9° |
| C21 | C23 | C22 | H22 | 179.8° | 179.9° |
| H21 | C21 | C23 | C22 | 179.9° | 179.9° |
| H21 | C21 | C23 | H23 | 0.1° | 0.1° |
| H22 | C22 | C23 | H23 | 0.1° | 0.0° |






