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1PR

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O9'P7'sing1.61Å1.50Å
O9'H9'sing0.97Å0.95Å
O8'P7'sing1.61Å1.51Å
O8'H8'sing0.97Å0.95Å
O'1P7'doub1.48Å1.49Å
O6'C5'sing1.43Å1.42Å
O6'P7'sing1.61Å1.64Å
C5'C4'sing1.53Å1.51Å
C5'H5'1sing1.09Å1.11Å
C5'H5'2sing1.09Å1.12Å
C4'O4'sing1.44Å1.47Å
C4'C3'sing1.55Å1.53Å
C4'H4'sing1.09Å1.11Å
O4'C1'sing1.44Å1.42Å
C3'O3'sing1.43Å1.25Å
C3'C2'sing1.55Å1.50Å
C3'H3'sing1.09Å1.12Å
O3'HO3'sing0.97Å0.95Å
C2'O2'sing1.43Å1.41Å
C2'C1'sing1.55Å1.51Å
C2'H2'sing1.09Å1.12Å
O2'HO2'sing0.97Å0.95Å
C1'N1sing1.47Å1.48Å
C1'H1'sing1.09Å1.12Å
N1C2sing1.36Å1.38ÅAromatic
N1C5sing1.36Å1.42ÅAromatic
C2N3doub1.30Å1.29ÅAromatic
C2H2sing1.08Å1.10Å
N3C4sing1.36Å1.36ÅAromatic
C4C9sing1.46Å1.44Å
C4C5doub1.39Å1.41ÅAromatic
C9O9doub1.22Å1.25Å
C9N9sing1.35Å1.40Å
N9HN91sing0.97Å1.02Å
N9HN92sing0.97Å1.02Å
N6C5sing1.38Å1.48Å
N6C7sing1.47Å1.33Å
N6HN6sing1.01Å1.02Å
C7N8sing1.47Å1.34Å
C7H71sing1.09Å1.11Å
C7H72sing1.09Å1.12Å
C1BC2Bsing1.53Å1.54Å
C1BN8sing1.47Å1.48Å
C1BH'1sing1.09Å1.11Å
C1BH'2sing1.09Å1.12Å
C2BC3Bsing1.53Å1.55Å
C2BO2Bsing1.43Å1.25Å
C2BH2Bsing1.09Å1.12Å
C3BC4Bsing1.53Å1.55Å
C3BO3Bsing1.43Å1.42Å
C3BH3Bsing1.09Å1.12Å
C4BC5Bsing1.53Å1.54Å
C4BO4Bsing1.43Å1.40Å
C4BH4Bsing1.09Å1.11Å
C5BO6Bsing1.43Å1.33Å
C5BH5A1sing1.09Å1.11Å
C5BH5A2sing1.09Å1.12Å
N8HN8sing1.01Å1.02Å
O2BHO2sing0.97Å0.95Å
O3BHO3sing0.97Å0.95Å
O4BHO4sing0.97Å0.95Å
O6BP7Bsing1.61Å1.51Å
P7BO'Ldoub1.48Å1.53Å
P7BO8Bsing1.61Å1.60Å
P7BO9Bsing1.61Å1.52Å
O8BH8Bsing0.97Å0.95Å
O9BH9Bsing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
P7'O9'H9'111.9°106.8°
O9'P7'O8'112.0°109.5°
O9'P7'O'1109.3°109.4°
O9'P7'O6'111.7°109.5°
P7'O8'H8'111.9°106.8°
O8'P7'O'1111.1°109.5°
O8'P7'O6'106.3°109.5°
O'1P7'O6'106.2°109.5°
C5'O6'P7'121.1°106.8°
O6'C5'C4'113.2°109.4°
O6'C5'H5'1110.8°109.4°
O6'C5'H5'2110.9°109.5°
C4'C5'H5'1110.9°109.5°
C4'C5'H5'2110.8°109.5°
C5'C4'O4'110.4°110.4°
C5'C4'C3'118.6°110.4°
C5'C4'H4'100.2°110.4°
H5'1C5'H5'299.5°109.4°
O4'C4'C3'101.6°104.8°
O4'C4'H4'117.6°110.4°
C4'O4'C1'112.2°105.3°
C3'C4'H4'109.3°110.3°
C4'C3'O3'112.2°110.5°
C4'C3'C2'104.8°104.1°
C4'C3'H3'112.7°110.5°
O4'C1'C2'106.5°104.9°
O4'C1'N1112.3°110.3°
O4'C1'H1'110.0°110.5°
O3'C3'C2'114.4°110.5°
O3'C3'H3'102.7°110.4°
C3'O3'HO3'112.1°106.8°
C2'C3'H3'110.3°110.6°
C3'C2'O2'116.3°110.5°
C3'C2'C1'104.0°104.0°
C3'C2'H2'109.7°110.5°
O2'C2'C1'112.2°110.8°
O2'C2'H2'101.0°110.5°
C2'O2'HO2'116.3°106.8°
C1'C2'H2'113.9°110.4°
C2'C1'N1110.6°110.3°
C2'C1'H1'111.7°110.3°
N1C1'H1'105.8°110.3°
C1'N1C2126.0°126.2°
C1'N1C5129.4°126.2°
C2N1C5104.6°107.6°
N1C2N3114.5°109.6°
N1C2H2125.7°125.2°
N1C5C4104.2°106.4°
N1C5N6132.5°126.8°
N3C2H2119.8°125.3°
C2N3C4105.6°109.2°
N3C4C9128.1°126.4°
N3C4C5111.1°107.2°
C9C4C5120.8°126.4°
C4C9O9129.1°120.0°
C4C9N9111.2°120.0°
C4C5N6123.3°126.8°
O9C9N9119.6°120.0°
C9N9HN91119.7°120.0°
C9N9HN92111.2°120.0°
HN91N9HN92129.1°120.0°
C5N6C7130.3°106.7°
C5N6HN6105.0°106.7°
C7N6HN6105.0°106.7°
N6C7N8115.1°109.5°
N6C7H71110.1°109.5°
N6C7H72110.1°109.4°
N8C7H71110.2°109.5°
N8C7H72110.1°109.5°
C7N8C1B127.3°106.7°
C7N8HN8105.9°106.8°
H71C7H72100.1°109.4°
C2BC1BN8122.1°109.5°
C2BC1BH'1107.7°109.5°
C2BC1BH'2107.7°109.5°
C1BC2BC3B121.2°109.5°
C1BC2BO2B119.6°109.5°
C1BC2BH2B52.6°109.5°
N8C1BH'1107.7°109.5°
N8C1BH'2107.7°109.4°
C1BN8HN8106.0°106.7°
H'1C1BH'2102.1°109.5°
C3BC2BO2B119.2°109.5°
C3BC2BH2B69.7°109.4°
C2BC3BC4B115.6°109.5°
C2BC3BO3B106.4°109.4°
C2BC3BH3B107.6°109.5°
O2BC2BH2B166.7°109.5°
C2BO2BHO2119.5°106.8°
C4BC3BO3B109.7°109.5°
C4BC3BH3B104.1°109.5°
C3BC4BC5B107.6°109.5°
C3BC4BO4B105.3°109.4°
C3BC4BH4B114.6°109.5°
O3BC3BH3B113.7°109.4°
C3BO3BHO3106.3°106.8°
C5BC4BO4B112.9°109.5°
C5BC4BH4B107.1°109.5°
C4BC5BO6B110.3°109.4°
C4BC5BH5A1112.0°109.5°
C4BC5BH5A2111.9°109.4°
O4BC4BH4B109.5°109.5°
C4BO4BHO4105.3°106.8°
O6BC5BH5A1111.9°109.5°
O6BC5BH5A2111.9°109.5°
C5BO6BP7B127.3°106.8°
H5A1C5BH5A298.5°109.5°
O6BP7BO'L111.2°109.5°
O6BP7BO8B106.7°109.5°
O6BP7BO9B98.0°109.4°
O'LP7BO8B111.4°109.5°
O'LP7BO9B116.1°109.4°
O8BP7BO9B112.3°109.5°
P7BO8BH8B106.7°106.8°
P7BO9BH9B98.0°106.8°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O9'P7'O8'O'1122.6°120.0°
O9'P7'O8'O6'122.3°120.0°
O9'P7'O8'H8'180.0°60.0°
O9'P7'O'1O6'120.7°120.0°
O9'P7'O6'C5'0.4°60.0°
H9'O9'P7'O8'180.0°60.0°
H9'O9'P7'O'156.4°179.9°
H9'O9'P7'O6'60.9°60.0°
O8'P7'O'1O6'115.2°120.0°
O8'P7'O6'C5'122.8°179.9°
H8'O8'P7'O'157.4°60.0°
H8'O8'P7'O6'57.7°180.0°
O'1P7'O6'C5'118.8°59.9°
O6'C5'C4'H5'1125.3°119.9°
O6'C5'C4'H5'2125.2°120.1°
O6'C5'H5'1H5'2116.7°120.0°
O6'C5'C4'O4'73.7°61.5°
O6'C5'C4'C3'42.9°176.9°
O6'C5'C4'H4'161.6°60.8°
P7'O6'C5'C4'135.0°180.0°
P7'O6'C5'H5'19.7°60.0°
P7'O6'C5'H5'299.8°59.9°
C4'C5'H5'1H5'2116.7°120.1°
C5'C4'O4'C3'126.7°118.9°
C5'C4'O4'H4'114.1°122.3°
C5'C4'C3'H4'113.9°122.3°
C5'C4'O4'C1'147.0°159.4°
C5'C4'C3'O3'82.6°98.4°
C5'C4'C3'C2'152.7°143.0°
C5'C4'C3'H3'32.7°24.2°
H5'1C5'C4'O4'161.0°178.6°
H5'1C5'C4'C3'82.3°63.2°
H5'1C5'C4'H4'36.4°59.1°
H5'2C5'C4'O4'51.6°58.5°
H5'2C5'C4'C3'168.2°56.9°
H5'2C5'C4'H4'73.1°179.2°
O4'C4'C3'H4'124.9°118.8°
O4'C4'C3'O3'156.2°142.8°
O4'C4'C3'C2'31.5°24.1°
O4'C4'C3'H3'88.5°94.7°
C4'O4'C1'C2'0.8°40.5°
C4'O4'C1'N1122.0°159.3°
C4'O4'C1'H1'120.4°78.4°
C3'C4'O4'C1'20.2°40.5°
C4'C3'O3'C2'119.2°114.7°
C4'C3'O3'H3'121.2°122.6°
C4'C3'C2'H3'121.5°118.7°
C4'C3'O3'HO3'180.0°180.0°
C4'C3'C2'O2'92.2°118.8°
C4'C3'C2'C1'31.7°0.1°
C4'C3'C2'H2'154.0°118.6°
H4'C4'O4'C1'99.0°78.3°
H4'C4'C3'O3'31.3°24.0°
H4'C4'C3'C2'93.4°94.7°
H4'C4'C3'H3'146.6°146.5°
O4'C1'C2'C3'19.5°23.9°
O4'C1'C2'O2'107.0°142.6°
O4'C1'C2'N1122.3°118.9°
O4'C1'C2'H1'120.1°119.0°
O4'C1'C2'H2'138.9°94.6°
O4'C1'N1H1'120.0°122.3°
O4'C1'N1C232.6°28.9°
O4'C1'N1C5146.9°150.9°
O3'C3'C2'H3'115.2°122.6°
O3'C3'C2'O2'31.1°0.1°
O3'C3'C2'C1'155.0°118.8°
O3'C3'C2'H2'82.7°122.7°
C2'C3'O3'HO3'60.8°65.4°
C3'C2'O2'C1'119.6°114.7°
C3'C2'O2'H2'118.7°122.6°
C3'C2'C1'H2'119.4°118.5°
C3'C2'O2'HO2'180.0°61.5°
C3'C2'C1'N1102.8°142.7°
C3'C2'C1'H1'139.6°95.1°
H3'C3'O3'HO3'58.7°57.4°
H3'C3'C2'O2'146.3°122.5°
H3'C3'C2'C1'89.8°118.5°
H3'C3'C2'H2'32.5°0.1°
O2'C2'C1'H2'114.0°122.8°
O2'C2'C1'N1130.7°98.5°
O2'C2'C1'H1'13.1°23.6°
C1'C2'O2'HO2'60.5°176.2°
C2'C1'N1H1'121.2°122.2°
C2'C1'N1C286.2°86.7°
C2'C1'N1C594.3°93.6°
H2'C2'O2'HO2'61.3°61.1°
H2'C2'C1'N116.6°24.2°
H2'C2'C1'H1'100.9°146.4°
C1'N1C2C5179.6°179.8°
C1'N1C2N3179.7°180.0°
C1'N1C2H20.4°0.0°
C1'N1C5C4179.8°179.8°
C1'N1C5N60.6°0.2°
H1'C1'N1C2152.6°151.2°
H1'C1'N1C526.9°28.6°
N1C2N3H2180.0°180.0°
N1C2N3C40.1°0.0°
C2N1C5C40.2°0.4°
C2N1C5N6179.8°180.0°
C5N1C2N30.1°0.2°
C5N1C2H2180.0°179.8°
N1C5C4N30.3°0.4°
N1C5C4C9179.6°179.9°
N1C5C4N6179.6°179.6°
N1C5N6C71.1°78.1°
N1C5N6HN6124.2°168.1°
C2N3C4C9179.5°180.0°
C2N3C4C50.2°0.3°
H2C2N3C4179.9°179.9°
N3C4C9C5179.3°179.6°
N3C4C9O9179.9°180.0°
N3C4C9N90.4°0.1°
N3C4C5N6179.9°180.0°
C4C9O9N9179.7°179.9°
C4C9N9HN910.2°180.0°
C4C9N9HN92180.0°0.3°
C9C4C5N60.7°0.3°
C5C4C9O90.6°0.4°
C5C4C9N9179.6°179.7°
C4C5N6C7179.4°102.4°
C4C5N6HN655.3°11.4°
O9C9N9HN91180.0°0.1°
O9C9N9HN920.3°179.7°
C9N9HN91HN92179.7°179.7°
C5N6C7HN6125.3°113.8°
C5N6C7N8112.7°94.2°
C5N6C7H7112.5°145.7°
C5N6C7H72122.1°25.8°
N6C7N8H71125.3°120.0°
N6C7N8H72125.2°120.0°
N6C7H71H72116.0°119.9°
N6C7N8C1B178.5°94.7°
N6C7N8HN856.2°151.5°
HN6N6C7N812.6°19.6°
HN6N6C7H71137.9°100.5°
HN6N6C7H72112.6°139.6°
N8C7H71H72116.0°120.0°
C7N8C1BC2B0.7°180.0°
C7N8C1BHN8125.3°113.9°
C7N8C1BH'1124.6°59.9°
C7N8C1BH'2126.0°60.1°
H71C7N8C1B56.3°25.4°
H71C7N8HN869.0°88.5°
H72C7N8C1B53.3°145.4°
H72C7N8HN8178.6°31.5°
C2BC1BN8H'1125.3°120.1°
C2BC1BN8H'2125.3°120.0°
C2BC1BH'1H'2113.3°120.1°
C1BC2BC3BO2B179.8°120.1°
C1BC2BC3BH2B11.1°120.0°
C1BC2BO2BH2B50.5°120.1°
C1BC2BC3BC4B101.6°180.0°
C1BC2BC3BO3B136.4°60.0°
C1BC2BC3BH3B14.2°59.9°
C2BC1BN8HN8126.0°66.2°
C1BC2BO2BHO2180.0°60.0°
N8C1BH'1H'2113.3°119.9°
N8C1BC2BC3B96.4°179.9°
N8C1BC2BO2B83.4°60.0°
N8C1BC2BH2B109.6°60.0°
H'1C1BC2BC3B138.3°60.0°
H'1C1BC2BO2B41.9°60.0°
H'1C1BC2BH2B125.2°180.0°
H'1C1BN8HN80.7°173.8°
H'2C1BC2BC3B28.9°60.0°
H'2C1BC2BO2B151.4°179.9°
H'2C1BC2BH2B15.7°59.9°
H'2C1BN8HN8108.7°53.8°
C3BC2BO2BH2B129.7°119.9°
C2BC3BC4BO3B120.2°120.0°
C2BC3BC4BH3B117.8°120.0°
C2BC3BO3BH3B118.2°119.9°
C2BC3BC4BC5B179.6°180.0°
C2BC3BC4BO4B59.7°60.0°
C2BC3BC4BH4B60.6°59.9°
C3BC2BO2BHO20.2°60.1°
C2BC3BO3BHO3180.0°60.0°
O2BC2BC3BC4B78.6°59.9°
O2BC2BC3BO3B43.4°60.1°
O2BC2BC3BH3B165.6°180.0°
H2BC2BC3BC4B90.5°60.0°
H2BC2BC3BO3B147.5°180.0°
H2BC2BC3BH3B25.3°60.1°
H2BC2BO2BHO2129.5°179.9°
C4BC3BO3BH3B116.1°120.0°
C3BC4BC5BO4B115.7°120.0°
C3BC4BC5BH4B123.7°120.0°
C3BC4BO4BH4B123.6°120.0°
C3BC4BC5BO6B133.8°179.9°
C3BC4BC5BH5A1100.9°60.0°
C3BC4BC5BH5A28.6°60.0°
C4BC3BO3BHO354.3°60.0°
C3BC4BO4BHO4179.9°60.0°
O3BC3BC4BC5B59.4°60.0°
O3BC3BC4BO4B180.0°180.0°
O3BC3BC4BH4B59.6°60.1°
H3BC3BC4BC5B62.6°60.0°
H3BC3BC4BO4B58.0°60.0°
H3BC3BC4BH4B178.3°180.0°
H3BC3BO3BHO361.7°180.0°
C5BC4BO4BH4B119.2°120.0°
C4BC5BO6BH5A1125.3°120.0°
C4BC5BO6BH5A2125.3°119.9°
C4BC5BH5A1H5A2117.8°120.0°
C5BC4BO4BHO462.8°60.0°
C4BC5BO6BP7B179.4°180.0°
O4BC4BC5BO6B18.1°60.0°
O4BC4BC5BH5A1143.4°180.0°
O4BC4BC5BH5A2107.2°59.9°
H4BC4BC5BO6B102.5°60.0°
H4BC4BC5BH5A122.8°60.0°
H4BC4BC5BH5A2132.2°180.0°
H4BC4BO4BHO456.5°180.0°
O6BC5BH5A1H5A2117.8°120.0°
C5BO6BP7BO'L58.0°60.0°
C5BO6BP7BO8B63.7°180.0°
C5BO6BP7BO9B179.9°59.9°
H5A1C5BO6BP7B54.1°60.0°
H5A2C5BO6BP7B55.3°60.1°
O6BP7BO'LO8B118.8°120.1°
O6BP7BO'LO9B110.9°119.9°
O6BP7BO8BO9B106.3°120.0°
O6BP7BO8BH8B180.0°180.0°
O6BP7BO9BH9B180.0°60.1°
O'LP7BO8BO9B132.2°120.0°
O'LP7BO8BH8B58.5°60.0°
O'LP7BO9BH9B61.6°180.0°
O8BP7BO9BH9B68.2°60.0°
O9BP7BO8BH8B73.7°60.0°

223790

PDB entries from 2024-08-14

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