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Summary Geometry Related PDB entries

1MI

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
O2	C4	sing	1.43Å	1.43Å
O	C2	sing	1.43Å	1.44Å
C2	C	sing	1.53Å	1.52Å
C1	C4	sing	1.53Å	1.54Å
C1	C	sing	1.53Å	1.53Å
O1	C3	sing	1.43Å	1.43Å
C3	C	sing	1.53Å	1.54Å
C1	H1	sing	1.09Å	1.10Å
C1	H2	sing	1.09Å	1.10Å
C2	H3	sing	1.09Å	1.10Å
C2	H4	sing	1.09Å	1.10Å
C3	H5	sing	1.09Å	1.10Å
C3	H6	sing	1.09Å	1.10Å
C4	H7	sing	1.09Å	1.10Å
C4	H8	sing	1.09Å	1.10Å
O2	H9	sing	0.97Å	0.95Å
C	H10	sing	1.09Å	1.10Å
O1	H11	sing	0.97Å	0.95Å
O	H12	sing	0.97Å	0.95Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
O2	C4	C1	115.8°	109.5°
O2	C4	H7	107.9°	109.5°
O2	C4	H8	107.9°	109.4°
C4	O2	H9	109.5°	114.0°
O	C2	C	110.8°	109.4°
O	C2	H3	109.1°	109.5°
O	C2	H4	109.1°	109.5°
C2	O	H12	109.5°	113.9°
C2	C	C1	109.3°	109.4°
C2	C	C3	110.2°	109.5°
C	C2	H3	109.1°	109.5°
C	C2	H4	109.1°	109.5°
C2	C	H10	108.1°	109.5°
C4	C1	C	116.3°	109.5°
C4	C1	H1	107.7°	109.5°
C4	C1	H2	107.7°	109.5°
C1	C4	H7	107.9°	109.5°
C1	C4	H8	107.9°	109.5°
C1	C	C3	113.1°	109.5°
C	C1	H1	107.7°	109.5°
C	C1	H2	107.7°	109.4°
C1	C	H10	108.1°	109.5°
O1	C3	C	114.6°	109.5°
O1	C3	H5	108.2°	109.5°
O1	C3	H6	108.2°	109.5°
C3	O1	H11	109.5°	114.0°
C	C3	H5	108.1°	109.5°
C	C3	H6	108.2°	109.5°
C3	C	H10	107.9°	109.5°
H1	C1	H2	109.5°	109.5°
H3	C2	H4	109.5°	109.4°
H5	C3	H6	109.4°	109.5°
H7	C4	H8	109.4°	109.5°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
O2	C4	C1	H7	120.9°	120.1°
O2	C4	C1	H8	120.9°	120.0°
O2	C4	C1	C	116.2°	174.7°
O2	C4	C1	H1	4.8°	65.2°
O2	C4	C1	H2	122.8°	54.8°
O2	C4	H7	H8	117.2°	120.0°
O	C2	C	H3	120.2°	120.0°
O	C2	C	H4	120.2°	120.1°
O	C2	C	C1	40.9°	175.0°
O	C2	C	C3	165.8°	65.0°
O	C2	H3	H4	119.4°	120.1°
O	C2	C	H10	76.5°	55.0°
C2	C	C1	C4	154.8°	65.7°
C2	C	C1	C3	123.2°	120.0°
C2	C	C1	H10	117.5°	120.0°
C2	C	C3	O1	24.2°	175.1°
C2	C	C3	H10	117.9°	120.0°
C2	C	C1	H1	33.8°	54.3°
C2	C	C1	H2	84.2°	174.3°
C	C2	H3	H4	119.4°	120.0°
C2	C	C3	H5	96.6°	55.2°
C2	C	C3	H6	145.0°	64.8°
C	C2	O	H12	180.0°	180.0°
C4	C1	C	H1	121.0°	120.0°
C4	C1	C	H2	121.0°	120.0°
C4	C1	C	C3	31.6°	174.4°
C4	C1	H1	H2	116.9°	120.0°
C1	C4	H7	H8	117.1°	120.0°
C1	C4	O2	H9	180.0°	180.0°
C4	C1	C	H10	87.8°	54.3°
C1	C	C3	O1	146.9°	64.9°
C1	C	C3	H10	119.5°	120.0°
C	C1	H1	H2	116.9°	119.9°
C1	C	C2	H3	79.3°	55.0°
C1	C	C2	H4	161.1°	65.0°
C1	C	C3	H5	26.1°	175.1°
C1	C	C3	H6	92.3°	55.1°
C	C1	C4	H7	122.9°	65.2°
C	C1	C4	H8	4.7°	54.8°
O1	C3	C	H5	120.8°	120.0°
O1	C3	C	H6	120.8°	120.0°
O1	C3	H5	H6	117.6°	120.0°
O1	C3	C	H10	93.6°	55.1°
C3	C	C1	H1	89.4°	65.6°
C3	C	C1	H2	152.6°	54.4°
C3	C	C2	H3	45.6°	175.0°
C3	C	C2	H4	74.0°	55.0°
C	C3	H5	H6	117.6°	120.0°
C	C3	O1	H11	180.0°	180.0°
H1	C1	C4	H7	116.2°	54.8°
H1	C1	C4	H8	125.7°	174.8°
H1	C1	C	H10	151.3°	174.3°
H2	C1	C4	H7	1.9°	174.9°
H2	C1	C4	H8	116.2°	65.2°
H2	C1	C	H10	33.2°	65.7°
H3	C2	C	H10	163.3°	65.0°
H3	C2	O	H12	59.8°	60.0°
H4	C2	C	H10	43.7°	175.1°
H4	C2	O	H12	59.8°	60.0°
H5	C3	C	H10	145.6°	64.8°
H5	C3	O1	H11	59.2°	60.0°
H6	C3	C	H10	27.1°	175.2°
H6	C3	O1	H11	59.2°	60.0°
H7	C4	O2	H9	59.1°	60.0°
H8	C4	O2	H9	59.1°	60.0°

222415

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