1MG
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| P | OP1 | doub | 1.48Å | 1.51Å | |
| P | OP2 | sing | 1.61Å | 1.45Å | |
| P | OP3 | sing | 1.61Å | 1.60Å | |
| P | O5' | sing | 1.61Å | 1.57Å | |
| OP2 | HOP2 | sing | 0.97Å | 0.95Å | |
| OP3 | HOP3 | sing | 0.97Å | 0.95Å | |
| O5' | C5' | sing | 1.43Å | 1.46Å | |
| C5' | C4' | sing | 1.53Å | 1.53Å | |
| C5' | H5' | sing | 1.09Å | 1.12Å | |
| C5' | H5'' | sing | 1.09Å | 1.11Å | |
| C4' | O4' | sing | 1.44Å | 1.42Å | |
| C4' | C3' | sing | 1.54Å | 1.53Å | |
| C4' | H4' | sing | 1.09Å | 1.11Å | |
| O4' | C1' | sing | 1.44Å | 1.41Å | |
| C3' | O3' | sing | 1.43Å | 1.43Å | |
| C3' | C2' | sing | 1.55Å | 1.53Å | |
| C3' | H3' | sing | 1.09Å | 1.12Å | |
| O3' | HO3' | sing | 0.97Å | 0.95Å | |
| C2' | O2' | sing | 1.43Å | 1.41Å | |
| C2' | C1' | sing | 1.54Å | 1.53Å | |
| C2' | H2' | sing | 1.09Å | 1.11Å | |
| O2' | HO2' | sing | 0.97Å | 0.95Å | |
| C1' | N9 | sing | 1.46Å | 1.44Å | |
| C1' | H1' | sing | 1.09Å | 1.11Å | |
| N9 | C8 | sing | 1.36Å | 1.38Å | Aromatic |
| N9 | C4 | sing | 1.37Å | 1.38Å | Aromatic |
| C8 | N7 | doub | 1.30Å | 1.31Å | Aromatic |
| C8 | H8 | sing | 1.08Å | 1.10Å | |
| N7 | C5 | sing | 1.36Å | 1.38Å | Aromatic |
| C5 | C6 | sing | 1.41Å | 1.42Å | |
| C5 | C4 | doub | 1.40Å | 1.37Å | Aromatic |
| C6 | O6 | doub | 1.22Å | 1.24Å | |
| C6 | N1 | sing | 1.35Å | 1.37Å | |
| N1 | CM1 | sing | 1.46Å | 1.44Å | |
| N1 | C2 | sing | 1.36Å | 1.36Å | |
| CM1 | HM11 | sing | 1.09Å | 1.11Å | |
| CM1 | HM12 | sing | 1.09Å | 1.12Å | |
| CM1 | HM13 | sing | 1.09Å | 1.11Å | |
| C2 | N2 | sing | 1.37Å | 1.35Å | |
| C2 | N3 | doub | 1.31Å | 1.33Å | |
| N2 | HN21 | sing | 0.97Å | 1.02Å | |
| N2 | HN22 | sing | 0.97Å | 1.02Å | |
| N3 | C4 | sing | 1.34Å | 1.36Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| OP1 | P | OP2 | 119.5° | 109.5° |
| OP1 | P | OP3 | 100.4° | 109.5° |
| OP1 | P | O5' | 110.6° | 109.5° |
| OP2 | P | OP3 | 107.1° | 109.4° |
| OP2 | P | O5' | 113.0° | 109.4° |
| P | OP2 | HOP2 | 119.5° | 106.8° |
| OP3 | P | O5' | 104.2° | 109.5° |
| P | OP3 | HOP3 | 100.3° | 106.7° |
| P | O5' | C5' | 116.9° | 106.8° |
| O5' | C5' | C4' | 104.1° | 109.5° |
| O5' | C5' | H5' | 114.2° | 109.4° |
| O5' | C5' | H5'' | 114.2° | 109.5° |
| C4' | C5' | H5' | 114.2° | 109.5° |
| C4' | C5' | H5'' | 114.2° | 109.5° |
| C5' | C4' | O4' | 108.2° | 110.4° |
| C5' | C4' | C3' | 113.4° | 110.5° |
| C5' | C4' | H4' | 106.9° | 110.4° |
| H5' | C5' | H5'' | 96.3° | 109.5° |
| O4' | C4' | C3' | 107.1° | 104.8° |
| O4' | C4' | H4' | 113.2° | 110.4° |
| C4' | O4' | C1' | 109.0° | 105.3° |
| C3' | C4' | H4' | 108.1° | 110.3° |
| C4' | C3' | O3' | 112.3° | 110.5° |
| C4' | C3' | C2' | 101.9° | 104.1° |
| C4' | C3' | H3' | 113.5° | 110.4° |
| O4' | C1' | C2' | 106.5° | 104.9° |
| O4' | C1' | N9 | 119.1° | 110.4° |
| O4' | C1' | H1' | 105.6° | 110.4° |
| O3' | C3' | C2' | 111.9° | 110.6° |
| O3' | C3' | H3' | 103.8° | 110.5° |
| C3' | O3' | HO3' | 112.2° | 106.8° |
| C2' | C3' | H3' | 113.8° | 110.6° |
| C3' | C2' | O2' | 108.7° | 110.5° |
| C3' | C2' | C1' | 99.9° | 104.0° |
| C3' | C2' | H2' | 116.7° | 110.5° |
| O2' | C2' | C1' | 111.7° | 110.8° |
| O2' | C2' | H2' | 105.9° | 110.4° |
| C2' | O2' | HO2' | 108.7° | 106.8° |
| C1' | C2' | H2' | 113.9° | 110.4° |
| C2' | C1' | N9 | 111.4° | 110.5° |
| C2' | C1' | H1' | 114.3° | 110.4° |
| N9 | C1' | H1' | 100.1° | 110.2° |
| C1' | N9 | C8 | 128.4° | 126.2° |
| C1' | N9 | C4 | 126.7° | 126.3° |
| C8 | N9 | C4 | 104.9° | 107.4° |
| N9 | C8 | N7 | 114.1° | 109.9° |
| N9 | C8 | H8 | 125.0° | 125.1° |
| N9 | C4 | C5 | 106.3° | 106.1° |
| N9 | C4 | N3 | 125.4° | 134.2° |
| N7 | C8 | H8 | 120.9° | 125.0° |
| C8 | N7 | C5 | 103.5° | 109.3° |
| N7 | C5 | C6 | 131.4° | 134.1° |
| N7 | C5 | C4 | 111.2° | 107.3° |
| C6 | C5 | C4 | 117.4° | 118.6° |
| C5 | C6 | O6 | 126.0° | 120.9° |
| C5 | C6 | N1 | 114.6° | 118.4° |
| C5 | C4 | N3 | 128.3° | 119.7° |
| O6 | C6 | N1 | 119.4° | 120.8° |
| C6 | N1 | CM1 | 118.1° | 119.9° |
| C6 | N1 | C2 | 122.3° | 120.3° |
| CM1 | N1 | C2 | 119.6° | 119.8° |
| N1 | CM1 | HM11 | 118.0° | 109.5° |
| N1 | CM1 | HM12 | 109.1° | 109.5° |
| N1 | CM1 | HM13 | 109.1° | 109.5° |
| N1 | C2 | N2 | 115.3° | 119.1° |
| N1 | C2 | N3 | 126.1° | 121.9° |
| HM11 | CM1 | HM12 | 109.1° | 109.4° |
| HM11 | CM1 | HM13 | 109.2° | 109.5° |
| HM12 | CM1 | HM13 | 101.0° | 109.5° |
| N2 | C2 | N3 | 118.6° | 119.0° |
| C2 | N2 | HN21 | 115.2° | 120.1° |
| C2 | N2 | HN22 | 110.0° | 120.0° |
| C2 | N3 | C4 | 111.3° | 121.1° |
| HN21 | N2 | HN22 | 110.2° | 120.0° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| OP1 | P | OP2 | OP3 | 113.0° | 120.0° |
| OP1 | P | OP2 | O5' | 132.8° | 120.0° |
| OP1 | P | OP3 | O5' | 114.6° | 120.0° |
| OP1 | P | OP2 | HOP2 | 180.0° | 60.0° |
| OP1 | P | OP3 | HOP3 | 180.0° | 180.0° |
| OP1 | P | O5' | C5' | 38.9° | 60.0° |
| OP2 | P | OP3 | O5' | 119.9° | 120.0° |
| OP2 | P | OP3 | HOP3 | 54.5° | 60.0° |
| OP2 | P | O5' | C5' | 175.9° | 180.0° |
| OP3 | P | OP2 | HOP2 | 67.0° | 60.0° |
| OP3 | P | O5' | C5' | 68.2° | 60.0° |
| O5' | P | OP2 | HOP2 | 47.2° | 180.0° |
| O5' | P | OP3 | HOP3 | 65.5° | 60.0° |
| P | O5' | C5' | C4' | 144.8° | 180.0° |
| P | O5' | C5' | H5' | 19.6° | 60.1° |
| P | O5' | C5' | H5'' | 89.9° | 60.0° |
| O5' | C5' | C4' | H5' | 125.2° | 119.9° |
| O5' | C5' | C4' | H5'' | 125.3° | 120.0° |
| O5' | C5' | H5' | H5'' | 120.1° | 120.0° |
| O5' | C5' | C4' | O4' | 67.3° | 61.5° |
| O5' | C5' | C4' | C3' | 51.3° | 176.9° |
| O5' | C5' | C4' | H4' | 170.4° | 60.8° |
| C4' | C5' | H5' | H5'' | 120.2° | 120.0° |
| C5' | C4' | O4' | C3' | 122.6° | 119.0° |
| C5' | C4' | O4' | H4' | 118.4° | 122.3° |
| C5' | C4' | C3' | H4' | 118.4° | 122.3° |
| C5' | C4' | O4' | C1' | 120.9° | 159.5° |
| C5' | C4' | C3' | O3' | 145.8° | 98.3° |
| C5' | C4' | C3' | C2' | 94.2° | 142.9° |
| C5' | C4' | C3' | H3' | 28.6° | 24.2° |
| H5' | C5' | C4' | O4' | 167.5° | 178.6° |
| H5' | C5' | C4' | C3' | 73.9° | 63.1° |
| H5' | C5' | C4' | H4' | 45.1° | 59.2° |
| H5'' | C5' | C4' | O4' | 58.0° | 58.5° |
| H5'' | C5' | C4' | C3' | 176.6° | 56.9° |
| H5'' | C5' | C4' | H4' | 64.4° | 179.2° |
| O4' | C4' | C3' | H4' | 122.3° | 118.8° |
| O4' | C4' | C3' | O3' | 94.9° | 142.8° |
| O4' | C4' | C3' | C2' | 25.1° | 24.0° |
| O4' | C4' | C3' | H3' | 147.9° | 94.7° |
| C4' | O4' | C1' | C2' | 22.9° | 40.4° |
| C4' | O4' | C1' | N9 | 149.8° | 159.4° |
| C4' | O4' | C1' | H1' | 98.9° | 78.4° |
| C3' | C4' | O4' | C1' | 1.7° | 40.5° |
| C4' | C3' | O3' | C2' | 113.9° | 114.7° |
| C4' | C3' | O3' | H3' | 122.9° | 122.5° |
| C4' | C3' | C2' | H3' | 122.6° | 118.6° |
| C4' | C3' | O3' | HO3' | 180.0° | 179.9° |
| C4' | C3' | C2' | O2' | 153.6° | 118.8° |
| C4' | C3' | C2' | C1' | 36.5° | 0.1° |
| C4' | C3' | C2' | H2' | 86.8° | 118.6° |
| H4' | C4' | O4' | C1' | 120.7° | 78.3° |
| H4' | C4' | C3' | O3' | 27.5° | 24.0° |
| H4' | C4' | C3' | C2' | 147.4° | 94.7° |
| H4' | C4' | C3' | H3' | 89.8° | 146.5° |
| O4' | C1' | C2' | C3' | 37.5° | 23.9° |
| O4' | C1' | C2' | O2' | 152.3° | 142.6° |
| O4' | C1' | C2' | N9 | 131.3° | 118.9° |
| O4' | C1' | C2' | H1' | 116.1° | 118.9° |
| O4' | C1' | C2' | H2' | 87.7° | 94.7° |
| O4' | C1' | N9 | H1' | 114.3° | 122.2° |
| O4' | C1' | N9 | C8 | 127.2° | 27.1° |
| O4' | C1' | N9 | C4 | 54.2° | 153.0° |
| O3' | C3' | C2' | H3' | 117.3° | 122.7° |
| O3' | C3' | C2' | O2' | 33.4° | 0.1° |
| O3' | C3' | C2' | C1' | 83.7° | 118.8° |
| O3' | C3' | C2' | H2' | 153.1° | 122.7° |
| C2' | C3' | O3' | HO3' | 66.1° | 65.3° |
| C3' | C2' | O2' | C1' | 109.3° | 114.8° |
| C3' | C2' | O2' | H2' | 126.1° | 122.6° |
| C3' | C2' | C1' | H2' | 125.2° | 118.6° |
| C3' | C2' | O2' | HO2' | 180.0° | 61.4° |
| C3' | C2' | C1' | N9 | 168.8° | 142.8° |
| C3' | C2' | C1' | H1' | 78.6° | 95.1° |
| H3' | C3' | O3' | HO3' | 57.0° | 57.4° |
| H3' | C3' | C2' | O2' | 83.8° | 122.6° |
| H3' | C3' | C2' | C1' | 159.1° | 118.5° |
| H3' | C3' | C2' | H2' | 35.8° | 0.0° |
| O2' | C2' | C1' | H2' | 120.0° | 122.7° |
| O2' | C2' | C1' | N9 | 76.3° | 98.4° |
| O2' | C2' | C1' | H1' | 36.2° | 23.7° |
| C1' | C2' | O2' | HO2' | 70.7° | 176.2° |
| C2' | C1' | N9 | H1' | 121.2° | 122.2° |
| C2' | C1' | N9 | C8 | 2.7° | 88.5° |
| C2' | C1' | N9 | C4 | 178.7° | 91.4° |
| H2' | C2' | O2' | HO2' | 53.9° | 61.2° |
| H2' | C2' | C1' | N9 | 43.7° | 24.2° |
| H2' | C2' | C1' | H1' | 156.2° | 146.4° |
| C1' | N9 | C8 | C4 | 178.8° | 179.9° |
| C1' | N9 | C8 | N7 | 179.0° | 180.0° |
| C1' | N9 | C8 | H8 | 1.1° | 0.1° |
| C1' | N9 | C4 | C5 | 178.9° | 180.0° |
| C1' | N9 | C4 | N3 | 1.1° | 0.1° |
| H1' | C1' | N9 | C8 | 118.5° | 149.3° |
| H1' | C1' | N9 | C4 | 60.1° | 30.8° |
| N9 | C8 | N7 | H8 | 180.0° | 180.0° |
| N9 | C8 | N7 | C5 | 0.2° | 0.0° |
| C8 | N9 | C4 | C5 | 0.0° | 0.1° |
| C8 | N9 | C4 | N3 | 179.9° | 180.0° |
| C4 | N9 | C8 | N7 | 0.1° | 0.1° |
| C4 | N9 | C8 | H8 | 179.9° | 180.0° |
| N9 | C4 | C5 | N7 | 0.1° | 0.0° |
| N9 | C4 | C5 | C6 | 179.5° | 179.8° |
| N9 | C4 | C5 | N3 | 179.9° | 180.0° |
| N9 | C4 | N3 | C2 | 179.6° | 180.0° |
| C8 | N7 | C5 | C6 | 179.4° | 179.7° |
| C8 | N7 | C5 | C4 | 0.2° | 0.0° |
| H8 | C8 | N7 | C5 | 179.8° | 180.0° |
| N7 | C5 | C6 | C4 | 179.2° | 179.7° |
| N7 | C5 | C6 | O6 | 0.5° | 0.1° |
| N7 | C5 | C6 | N1 | 179.5° | 179.9° |
| N7 | C5 | C4 | N3 | 180.0° | 180.0° |
| C5 | C6 | O6 | N1 | 180.0° | 180.0° |
| C5 | C6 | N1 | CM1 | 179.4° | 179.8° |
| C5 | C6 | N1 | C2 | 0.1° | 0.4° |
| C6 | C5 | C4 | N3 | 0.6° | 0.2° |
| C4 | C5 | C6 | O6 | 179.7° | 179.6° |
| C4 | C5 | C6 | N1 | 0.3° | 0.4° |
| C5 | C4 | N3 | C2 | 0.4° | 0.0° |
| O6 | C6 | N1 | CM1 | 0.6° | 0.2° |
| O6 | C6 | N1 | C2 | 179.9° | 179.7° |
| C6 | N1 | CM1 | C2 | 179.3° | 179.8° |
| C6 | N1 | CM1 | HM11 | 180.0° | 114.8° |
| C6 | N1 | CM1 | HM12 | 54.8° | 125.2° |
| C6 | N1 | CM1 | HM13 | 54.7° | 5.2° |
| C6 | N1 | C2 | N2 | 179.9° | 179.8° |
| C6 | N1 | C2 | N3 | 0.3° | 0.2° |
| N1 | CM1 | HM11 | HM12 | 125.2° | 120.0° |
| N1 | CM1 | HM11 | HM13 | 125.3° | 120.0° |
| N1 | CM1 | HM12 | HM13 | 114.8° | 120.0° |
| CM1 | N1 | C2 | N2 | 0.9° | 0.0° |
| CM1 | N1 | C2 | N3 | 179.5° | 180.0° |
| C2 | N1 | CM1 | HM11 | 0.8° | 65.0° |
| C2 | N1 | CM1 | HM12 | 126.0° | 55.0° |
| C2 | N1 | CM1 | HM13 | 124.5° | 175.0° |
| N1 | C2 | N2 | N3 | 179.6° | 180.0° |
| N1 | C2 | N2 | HN21 | 180.0° | 174.2° |
| N1 | C2 | N2 | HN22 | 54.7° | 5.8° |
| N1 | C2 | N3 | C4 | 0.0° | 0.0° |
| HM11 | CM1 | HM12 | HM13 | 114.9° | 119.9° |
| C2 | N2 | HN21 | HN22 | 125.2° | 179.9° |
| N2 | C2 | N3 | C4 | 179.6° | 180.0° |
| N3 | C2 | N2 | HN21 | 0.4° | 5.7° |
| N3 | C2 | N2 | HN22 | 125.7° | 174.2° |
