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SummaryGeometryRelated PDB entries

1M2

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
C01N02sing1.46Å1.45Å
N02C03sing1.38Å1.47Å
C03N04sing1.37Å1.37ÅAromatic
C03N11doub1.31Å1.34ÅAromatic
N04C05sing1.39Å1.38ÅAromatic
N11C10sing1.36Å1.37ÅAromatic
C05C10doub1.40Å1.38ÅAromatic
C05C06sing1.39Å1.44ÅAromatic
C10C09sing1.40Å1.40ÅAromatic
C06C07doub1.38Å1.38ÅAromatic
C09C08doub1.38Å1.40ÅAromatic
C07C08sing1.39Å1.40ÅAromatic
C01H1sing1.09Å1.10Å
C01H2sing1.09Å1.10Å
C01H3sing1.09Å1.10Å
N02H4sing0.97Å1.00Å
N04H5sing0.97Å1.00Å
C06H6sing1.08Å1.08Å
C07H7sing1.08Å1.08Å
C08H8sing1.08Å1.08Å
C09H9sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
C01N02C03119.8°120.0°
N02C01H1109.5°109.5°
N02C01H2109.5°109.5°
N02C01H3109.5°109.4°
C01N02H4106.8°120.0°
N02C03N04126.6°125.0°
N02C03N11124.8°125.1°
C03N02H4106.8°120.0°
N04C03N11108.6°109.9°
C03N04C05107.9°107.2°
C03N04H5126.0°126.4°
C03N11C10108.4°109.6°
N04C05C10107.0°106.2°
N04C05C06132.0°133.9°
C05N04H5126.0°126.4°
N11C10C05108.1°107.1°
N11C10C09131.7°133.4°
C10C05C06121.0°120.0°
C05C10C09120.3°119.5°
C05C06C07118.5°119.9°
C05C06H6120.7°120.0°
C10C09C08118.9°119.8°
C10C09H9120.6°120.2°
C06C07C08119.9°120.4°
C07C06H6120.7°120.1°
C06C07H7120.0°119.8°
C09C08C07121.3°120.5°
C09C08H8119.3°119.8°
C08C09H9120.5°120.1°
C08C07H7120.0°119.8°
C07C08H8119.3°119.7°
H1C01H2109.5°109.5°
H1C01H3109.4°109.5°
H2C01H3109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
C01N02C03H4121.5°179.9°
C01N02C03N049.9°0.1°
C01N02C03N11169.0°179.7°
N02C01H1H2120.0°120.1°
N02C01H1H3120.0°119.9°
N02C01H2H3120.0°119.9°
N02C03N04N11179.0°179.7°
N02C03N04C05179.2°180.0°
N02C03N11C10178.8°179.9°
C03N02C01H1180.0°59.9°
C03N02C01H260.0°180.0°
C03N02C01H360.0°60.0°
N02C03N04H50.8°0.0°
C03N04C05H5180.0°180.0°
N04C03N11C100.2°0.4°
C03N04C05C100.5°0.0°
C03N04C05C06179.1°180.0°
N04C03N02H4111.6°180.0°
N11C03N04C050.2°0.3°
C03N11C10C050.6°0.4°
C03N11C10C09179.0°179.8°
N11C03N02H469.6°0.3°
N11C03N04H5179.8°179.7°
N04C05C10N110.7°0.2°
N04C05C10C06178.8°180.0°
N04C05C10C09178.9°180.0°
N04C05C06C07179.5°180.0°
N04C05C06H60.5°0.1°
N11C10C05C09179.6°179.8°
N11C10C05C06179.5°179.7°
N11C10C09C08178.9°179.7°
N11C10C09H91.1°0.4°
C10C05C06C072.1°0.0°
C05C10C09C081.7°0.0°
C10C05N04H5179.4°180.0°
C10C05C06H6177.9°180.0°
C05C10C09H9178.3°179.9°
C06C05C10C090.1°0.0°
C05C06C07H6180.0°179.9°
C05C06C07C082.2°0.0°
C06C05N04H50.9°0.0°
C05C06C07H7177.7°180.0°
C10C09C08H9180.0°180.0°
C10C09C08C071.5°0.0°
C10C09C08H8178.4°180.0°
C06C07C08C090.4°0.0°
C06C07C08H7180.0°179.9°
C06C07C08H8179.6°180.0°
C09C08C07H8180.0°179.9°
C09C08C07H7179.5°180.0°
C08C07C06H6177.8°180.0°
C07C08C09H9178.5°179.9°
H1C01H2H3120.0°120.0°
H1C01N02H458.5°120.0°
H2C01N02H461.4°0.1°
H3C01N02H4178.5°120.0°
H6C06C07H72.2°0.1°
H7C07C08H80.5°0.1°
H8C08C09H91.6°0.0°

248636

PDB entries from 2026-02-04

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