Loading
PDBj
English日本語简体中文繁體中文한국어
✖
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
SummaryGeometryRelated PDB entries

1M1

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
CAUCATdoub1.39Å1.38ÅAromatic
CAUCAVsing1.38Å1.34ÅAromatic
CATCASsing1.39Å1.34ÅAromatic
CASCARdoub1.38Å1.35ÅAromatic
CAVNAWdoub1.32Å1.40ÅAromatic
CARNAWsing1.32Å1.36ÅAromatic
CARCAQsing1.51Å1.52Å
CAQNAPsing1.47Å1.48Å
CAQNAEsing1.47Å1.49Å
NAPCAOsing1.39Å1.44Å
CAICAHdoub1.38Å1.38ÅAromatic
CAICADsing1.39Å1.44ÅAromatic
CAHCAGsing1.38Å1.41ÅAromatic
NAECADsing1.36Å1.38ÅAromatic
NAECAAsing1.39Å1.38ÅAromatic
CADCACdoub1.42Å1.33ÅAromatic
CAOCANdoub1.39Å1.40ÅAromatic
CAOCAJsing1.41Å1.39ÅAromatic
CANCAMsing1.38Å1.37ÅAromatic
CAGCAFdoub1.37Å1.43ÅAromatic
CAACAJsing1.48Å1.42Å
CAANABdoub1.30Å1.33ÅAromatic
CAJCAKdoub1.39Å1.42ÅAromatic
CACCAFsing1.40Å1.40ÅAromatic
CACNABsing1.35Å1.38ÅAromatic
CAMCALdoub1.38Å1.42ÅAromatic
CAKCALsing1.38Å1.41ÅAromatic
CASH1sing1.08Å1.08Å
CATH2sing1.08Å1.08Å
CAUH3sing1.08Å1.08Å
CAVH4sing1.08Å1.08Å
CAQH5sing1.09Å1.10Å
CAIH6sing1.08Å1.08Å
CAHH7sing1.08Å1.08Å
CAGH8sing1.08Å1.08Å
CAFH9sing1.08Å1.08Å
CAKH10sing1.08Å1.08Å
CALH11sing1.08Å1.08Å
CAMH12sing1.08Å1.08Å
CANH13sing1.08Å1.08Å
NAPH14sing0.97Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
CATCAUCAV118.3°119.1°
CAUCATCAS126.2°118.4°
CAUCATH2116.9°120.8°
CATCAUH3120.8°120.4°
CAUCAVNAW117.7°120.8°
CAVCAUH3120.9°120.5°
CAUCAVH4121.2°119.6°
CATCASCAR114.6°119.2°
CATCASH1122.7°120.5°
CASCATH2116.9°120.8°
CASCARNAW122.2°120.7°
CASCARCAQ113.3°119.6°
CARCASH1122.7°120.4°
CAVNAWCAR120.9°121.8°
NAWCAVH4121.2°119.6°
NAWCARCAQ124.5°119.7°
CARCAQNAP114.2°109.5°
CARCAQNAE109.8°109.5°
CARCAQH5107.9°109.5°
NAPCAQNAE108.1°109.2°
CAQNAPCAO120.3°121.0°
NAPCAQH5108.4°109.5°
CAQNAPH14106.7°119.4°
CAQNAECAD128.3°130.6°
CAQNAECAA123.6°122.3°
NAECAQH5108.3°109.6°
NAPCAOCAN117.6°121.4°
NAPCAOCAJ121.6°119.3°
CAONAPH14106.7°119.6°
CAHCAICAD116.6°117.0°
CAICAHCAG121.0°122.1°
CAHCAIH6121.7°121.5°
CAICAHH7119.5°119.0°
CAICADNAE130.0°133.0°
CAICADCAC122.9°120.8°
CADCAIH6121.7°121.4°
CAHCAGCAF120.6°122.1°
CAGCAHH7119.5°118.9°
CAHCAGH8119.7°118.9°
CADNAECAA106.9°107.1°
NAECADCAC107.0°106.2°
NAECAACAJ119.9°120.2°
NAECAANAB108.9°109.9°
CADCACCAF121.7°120.8°
CADCACNAB110.1°107.5°
CANCAOCAJ120.7°119.2°
CAOCANCAM120.5°119.8°
CAOCANH13119.8°120.0°
CAOCAJCAA118.0°116.7°
CAOCAJCAK121.6°120.4°
CANCAMCAL117.8°120.8°
CANCAMH12121.1°119.6°
CAMCANH13119.8°120.1°
CAGCAFCAC116.8°117.1°
CAFCAGH8119.7°118.9°
CAGCAFH9121.6°121.5°
CAJCAANAB130.2°129.9°
CAACAJCAK119.7°122.9°
CAANABCAC106.5°109.4°
CAJCAKCAL115.0°119.5°
CAJCAKH10122.5°120.3°
CAFCACNAB127.8°131.7°
CACCAFH9121.6°121.4°
CAMCALCAK124.1°120.2°
CAMCALH11118.0°119.9°
CALCAMH12121.1°119.6°
CALCAKH10122.5°120.2°
CAKCALH11117.9°119.9°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
CATCAUCAVH3180.0°179.9°
CAUCATCASH2180.0°179.9°
CAUCATCASCAR3.5°0.0°
CATCAUCAVNAW0.6°0.0°
CAUCATCASH1176.5°179.7°
CATCAUCAVH4179.4°180.0°
CAVCAUCATCAS2.6°0.0°
CAUCAVNAWH4180.0°180.0°
CAUCAVNAWCAR2.6°0.0°
CAVCAUCATH2177.4°180.0°
CATCASCARH1180.0°179.7°
CATCASCARNAW1.3°0.0°
CATCASCARCAQ176.5°179.7°
CASCATCAUH3177.4°179.9°
CASCARNAWCAV1.6°0.0°
CASCARNAWCAQ177.6°179.7°
CASCARCAQNAP159.9°115.0°
CASCARCAQNAE78.5°125.3°
CARCASCATH2176.5°180.0°
CASCARCAQH539.3°5.1°
CAVNAWCARCAQ179.2°179.7°
NAWCAVCAUH3179.4°179.9°
NAWCARCAQNAP22.3°64.7°
NAWCARCAQNAE99.2°55.0°
NAWCARCASH1178.7°179.7°
CARNAWCAVH4177.4°180.0°
NAWCARCAQH5142.9°175.2°
CARCAQNAPNAE122.5°119.9°
CARCAQNAPH5120.3°120.1°
CARCAQNAEH5117.7°120.1°
CARCAQNAPCAO92.7°79.9°
CARCAQNAECAD72.5°85.0°
CARCAQNAECAA93.0°94.3°
CAQCARCASH13.5°0.0°
CARCAQNAPH1428.8°100.1°
NAPCAQNAEH5117.2°120.0°
CAQNAPCAOH14121.5°180.0°
NAPCAQNAECAD162.4°155.1°
NAPCAQNAECAA32.1°25.6°
CAQNAPCAOCAN163.2°151.4°
CAQNAPCAOCAJ12.8°30.2°
NAECAQNAPCAO29.8°40.0°
CAQNAECADCAI8.8°1.4°
CAQNAECADCAA167.4°179.4°
CAQNAECADCAC169.0°178.5°
CAQNAECAACAJ15.7°2.3°
CAQNAECAANAB174.3°178.4°
NAECAQNAPH14151.3°140.0°
NAPCAOCANCAJ176.0°178.3°
NAPCAOCANCAM179.8°177.1°
NAPCAOCAJCAA7.1°3.0°
NAPCAOCAJCAK176.8°176.3°
CAONAPCAQH5146.9°160.0°
NAPCAOCANH130.2°2.8°
CAHCAICADH6180.0°180.0°
CAICAHCAGH7180.0°180.0°
CAHCAICADNAE178.6°179.7°
CAHCAICADCAC1.2°0.1°
CAICAHCAGCAF3.5°0.1°
CAICAHCAGH8176.5°179.9°
CADCAICAHCAG3.1°0.0°
CAICADNAECAC177.8°179.9°
CAICADNAECAA176.2°179.2°
CAICADCACCAF5.1°0.2°
CAICADCACNAB178.7°179.6°
CADCAICAHH7176.9°180.0°
CAHCAGCAFH8180.0°180.0°
CAHCAGCAFCAC0.3°0.0°
CAGCAHCAIH6176.9°180.0°
CAHCAGCAFH9179.6°180.0°
CADNAECAACAJ176.1°178.2°
CADNAECAANAB6.1°1.1°
NAECADCACCAF176.9°179.7°
NAECADCACNAB3.4°0.5°
CADNAECAQH545.2°35.1°
NAECADCAIH61.4°0.3°
CAANAECADCAC1.6°0.9°
NAECAACAJCAO5.9°10.6°
NAECAACAJNAB167.6°179.1°
NAECAACAJCAK175.9°170.2°
NAECAANABCAC8.1°0.8°
CAANAECAQH5149.3°145.6°
CADCACCAFCAG4.6°0.2°
CADCACNABCAA7.2°0.2°
CADCACCAFNAB172.3°179.8°
CACCADCAIH6178.9°179.8°
CADCACCAFH9175.4°179.9°
CAOCANCAMH13180.0°180.0°
CANCAOCAJCAA177.0°178.7°
CANCAOCAJCAK7.3°2.1°
CAOCANCAMCAL1.2°0.1°
CAOCANCAMH12178.7°179.9°
CANCAONAPH1441.7°28.6°
CAJCAOCANCAM3.8°1.2°
CAOCAJCAACAK169.9°179.2°
CAOCAJCAANAB161.6°168.5°
CAOCAJCAKCAL5.4°1.6°
CAOCAJCAKH10174.6°178.3°
CAJCAOCANH13176.2°178.8°
CAJCAONAPH14134.3°149.8°
CANCAMCALH12180.0°180.0°
CANCAMCALCAK3.0°0.6°
CANCAMCALH11176.9°179.3°
CAGCAFCACH9180.0°179.9°
CAGCAFCACNAB176.9°179.7°
CAFCAGCAHH7176.5°179.9°
CAJCAANABCAC176.7°178.4°
CAACAJCAKCAL174.9°179.2°
CAACAJCAKH105.0°0.9°
NABCAACAJCAK8.3°10.7°
CAANABCACCAF179.8°179.7°
CAJCAKCALCAM0.2°0.3°
CAJCAKCALH10180.0°179.9°
CAJCAKCALH11179.8°179.8°
CACCAFCAGH8179.7°180.0°
NABCACCAFH93.1°0.3°
CAMCALCAKH11180.0°179.9°
CAMCALCAKH10179.8°179.7°
CALCAMCANH13178.7°179.8°
CAKCALCAMH12177.0°179.4°
H1CASCATH23.5°0.3°
H2CATCAUH32.6°0.0°
H3CAUCAVH40.6°0.0°
H5CAQNAPH1491.5°20.0°
H6CAICAHH73.1°0.0°
H7CAHCAGH83.5°0.0°
H8CAGCAFH90.4°0.0°
H10CAKCALH110.2°0.3°
H11CALCAMH123.1°0.7°
H12CAMCANH131.3°0.2°

227344

PDB entries from 2024-11-13

PDB statisticsPDBj update infoContact PDBjnumon