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SummaryGeometryRelated PDB entries

1LZ

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
O11C10sing1.43Å1.41Å
C10C08sing1.51Å1.47Å
C07C08doub1.39Å1.37ÅAromatic
C07N06sing1.32Å1.33ÅAromatic
C08C09sing1.38Å1.45ÅAromatic
N06C05doub1.33Å1.37ÅAromatic
C09C04doub1.39Å1.37ÅAromatic
C05C04sing1.41Å1.40ÅAromatic
C05C01sing1.46Å1.41ÅAromatic
C04N03sing1.38Å1.35ÅAromatic
C01C02doub1.34Å1.41ÅAromatic
N03C02sing1.37Å1.35ÅAromatic
C01H1sing1.08Å1.08Å
C02H2sing1.08Å1.08Å
N03H3sing0.97Å1.00Å
C07H4sing1.08Å1.08Å
C09H5sing1.08Å1.08Å
C10H6sing1.09Å1.10Å
C10H7sing1.09Å1.10Å
O11H8sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
O11C10C08116.2°109.5°
O11C10H6107.8°109.5°
O11C10H7107.8°109.5°
C10O11H8109.5°114.0°
C10C08C07120.3°120.2°
C10C08C09119.9°120.2°
C08C10H6107.8°109.4°
C08C10H7107.8°109.4°
C08C07N06120.6°121.3°
C07C08C09119.8°119.7°
C08C07H4119.7°119.4°
C07N06C05121.1°121.4°
N06C07H4119.7°119.4°
C08C09C04118.4°118.3°
C08C09H5120.8°120.8°
N06C05C04121.1°120.4°
N06C05C01132.4°133.8°
C09C04C05119.0°119.0°
C09C04N03132.4°133.7°
C04C09H5120.8°120.9°
C04C05C01106.5°105.8°
C05C04N03108.6°107.3°
C05C01C02106.6°107.1°
C05C01H1126.7°126.4°
C04N03C02109.8°109.8°
C04N03H3125.1°125.1°
C01C02N03108.4°110.0°
C02C01H1126.7°126.5°
C01C02H2125.8°125.0°
N03C02H2125.8°125.0°
C02N03H3125.1°125.1°
H6C10H7109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
O11C10C08H6121.0°120.0°
O11C10C08H7121.0°120.0°
O11C10C08C0793.2°90.0°
O11C10C08C0985.4°90.1°
O11C10H6H7117.0°120.0°
C10C08C07C09178.6°179.9°
C10C08C07N06178.7°180.0°
C10C08C09C04178.9°179.8°
C10C08C07H41.3°0.2°
C10C08C09H51.1°0.1°
C08C10H6H7116.9°119.9°
C08C10O11H8180.0°180.0°
C08C07N06H4180.0°179.8°
C08C07N06C050.1°0.0°
C07C08C09C040.3°0.3°
C07C08C09H5179.7°180.0°
C07C08C10H627.8°150.0°
C07C08C10H7145.8°30.0°
N06C07C08C090.1°0.2°
C07N06C05C040.3°0.0°
C07N06C05C01179.9°179.6°
C08C09C04H5180.0°179.7°
C08C09C04C050.5°0.3°
C08C09C04N03179.9°180.0°
C09C08C07H4179.8°179.9°
C09C08C10H6153.7°29.9°
C09C08C10H735.6°149.9°
N06C05C04C090.5°0.1°
N06C05C04C01179.7°179.8°
N06C05C04N03180.0°179.9°
N06C05C01C02180.0°180.0°
N06C05C01H10.0°0.2°
C05N06C07H4179.9°179.7°
C09C04C05N03179.5°179.8°
C09C04C05C01179.8°179.9°
C09C04N03C02179.6°180.0°
C09C04N03H30.4°0.1°
C04C05C01C020.3°0.3°
C05C04N03C020.2°0.3°
C04C05C01H1179.6°179.9°
C05C04N03H3179.8°179.8°
C05C04C09H5179.5°180.0°
C01C05C04N030.3°0.4°
C05C01C02H1180.0°179.8°
C05C01C02N030.3°0.2°
C05C01C02H2179.7°179.8°
C04N03C02C010.1°0.1°
C04N03C02H3180.0°179.9°
C04N03C02H2179.9°180.0°
N03C04C09H50.2°0.3°
C01C02N03H2180.0°180.0°
C01C02N03H3180.0°180.0°
N03C02C01H1179.7°180.0°
H1C01C02H20.3°0.0°
H2C02N03H30.0°0.1°
H6C10O11H859.1°60.0°
H7C10O11H859.0°60.0°

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PDB entries from 2024-07-10

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