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SummaryGeometryRelated PDB entries

1LX

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
C06N07sing1.34Å1.33ÅAromatic
C06C05doub1.35Å1.41ÅAromatic
N07C08doub1.33Å1.34ÅAromatic
C05N04sing1.37Å1.38ÅAromatic
C08N04sing1.37Å1.33ÅAromatic
C08C09sing1.41Å1.41ÅAromatic
N04C03sing1.37Å1.36ÅAromatic
C09C01doub1.36Å1.38ÅAromatic
C03N10sing1.38Å1.40Å
C03C02doub1.36Å1.36ÅAromatic
C01C02sing1.40Å1.36ÅAromatic
C01H1sing1.08Å1.08Å
C02H2sing1.08Å1.08Å
C05H3sing1.08Å1.08Å
C06H4sing1.08Å1.08Å
C09H5sing1.08Å1.08Å
N10H6sing0.97Å1.00Å
N10H7sing0.97Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
N07C06C05108.5°108.7°
C06N07C08108.6°109.2°
N07C06H4125.7°125.7°
C06C05N04104.5°107.2°
C06C05H3127.8°126.4°
C05C06H4125.7°125.6°
N07C08N04109.1°108.0°
N07C08C09130.6°132.3°
C05N04C08109.1°107.0°
C05N04C03129.4°132.6°
N04C05H3127.8°126.4°
N04C08C09120.3°119.7°
C08N04C03121.4°120.4°
C08C09C01117.0°119.5°
C08C09H5121.5°120.3°
N04C03N10116.8°119.8°
N04C03C02120.5°120.4°
C09C01C02122.3°119.8°
C09C01H1118.8°120.1°
C01C09H5121.5°120.2°
N10C03C02122.6°119.8°
C03N10H6109.5°120.0°
C03N10H7109.5°120.0°
C03C02C01118.4°120.2°
C03C02H2120.8°119.9°
C02C01H1118.8°120.1°
C01C02H2120.8°119.9°
H6N10H7109.5°120.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
N07C06C05H4180.0°180.0°
N07C06C05N040.5°0.0°
C06N07C08N043.6°0.0°
C06N07C08C09178.2°179.7°
N07C06C05H3179.6°180.0°
C05C06N07C081.9°0.0°
C06C05N04H3180.0°180.0°
C06C05N04C082.7°0.0°
C06C05N04C03178.9°180.0°
N07C08N04C053.9°0.0°
N07C08N04C09178.4°179.7°
N07C08N04C03177.4°180.0°
N07C08C09C01179.6°179.8°
C08N07C06H4178.1°180.0°
N07C08C09H50.4°0.1°
C05N04C08C03178.6°180.0°
C05N04C08C09177.7°179.8°
C05N04C03N104.5°0.0°
C05N04C03C02176.8°180.0°
N04C05C06H4179.5°180.0°
N04C08C09C011.6°0.6°
C08N04C03N10177.1°180.0°
C08N04C03C021.5°0.0°
C08N04C05H3177.4°180.0°
N04C08C09H5178.5°179.7°
C09C08N04C031.0°0.3°
C08C09C01H5180.0°179.7°
C08C09C01C023.7°0.6°
C08C09C01H1176.3°179.7°
N04C03N10C02178.7°180.0°
N04C03C02C010.5°0.0°
N04C03C02H2179.5°179.9°
C03N04C05H31.1°0.1°
N04C03N10H6180.0°180.0°
N04C03N10H760.0°0.0°
C09C01C02C033.2°0.3°
C09C01C02H1180.0°179.7°
C09C01C02H2176.8°179.8°
N10C03C02C01179.1°180.0°
N10C03C02H20.9°0.1°
C03N10H6H7120.0°180.0°
C03C02C01H2180.0°179.9°
C03C02C01H1176.8°180.0°
C02C03N10H61.4°0.0°
C02C03N10H7118.6°180.0°
C02C01C09H5176.4°179.7°
H1C01C02H23.2°0.0°
H1C01C09H53.7°0.0°
H3C05C06H40.4°0.0°

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PDB entries from 2024-07-24

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