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1JY

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
OCdoub1.21Å1.25Å
COXTsing1.34Å1.26Å
CCAsing1.51Å1.50Å
OE1CDdoub1.21Å1.25Å
CGCBsing1.53Å1.52Å
CGCDsing1.51Å1.51Å
CBCAsing1.53Å1.52Å
CDOE2sing1.34Å1.26Å
CANsing1.47Å1.46Å
NCBHsing1.35Å1.34Å
CBHOAEdoub1.21Å1.22Å
CBHCAXsing1.51Å1.52Å
CAXCAZsing1.53Å1.53Å
CAZCBTsing1.53Å1.54Å
OAKCBGdoub1.21Å1.24Å
CBGCBTsing1.51Å1.50Å
CBGOADsing1.34Å1.25Å
CBTNBDsing1.46Å1.44Å
NBDCBJsing1.35Å1.33Å
OAGCBJdoub1.22Å1.22Å
CBJCBPsing1.47Å1.50Å
CBPCAQdoub1.40Å1.38ÅAromatic
CBPCAPsing1.40Å1.38ÅAromatic
CAQCASsing1.38Å1.38ÅAromatic
CAPCARdoub1.38Å1.40ÅAromatic
CASCBQdoub1.39Å1.39ÅAromatic
CARCBQsing1.39Å1.41ÅAromatic
CBQNBUsing1.39Å1.37Å
NBUCAUsing1.46Å1.44Å
NBUCBOsing1.47Å1.46Å
CAMCBOsing1.54Å1.54Å
CAMCAVsing1.54Å1.55Å
CAUCALsing1.47Å1.47Å
CBOCBNsing1.51Å1.51Å
CAVCBKsing1.51Å1.50Å
CALCAAtrip1.17Å1.24Å
CBNCBKdoub1.39Å1.46ÅAromatic
CBNCAOsing1.38Å1.42ÅAromatic
CBKCANsing1.38Å1.39ÅAromatic
CAOCBRdoub1.39Å1.41ÅAromatic
CANCBMdoub1.39Å1.42ÅAromatic
CBRCBMsing1.41Å1.41ÅAromatic
CBRCBIsing1.47Å1.41Å
OAFCBIdoub1.22Å1.27Å
CBMNBBsing1.38Å1.34Å
CBINBAsing1.35Å1.35Å
OAHCATsing1.43Å1.47Å
NBBCBLsing1.34Å1.36Å
NBACBLdoub1.30Å1.34Å
CBLCATsing1.51Å1.51Å
CATH1sing1.09Å1.10Å
CATH2sing1.09Å1.10Å
OAHH3sing0.97Å0.95Å
NBBH4sing0.97Å1.00Å
CAOH5sing1.08Å1.08Å
CANH6sing1.08Å1.08Å
CAVH7sing1.09Å1.10Å
CAVH8sing1.09Å1.10Å
CAMH9sing1.09Å1.10Å
CAMH10sing1.09Å1.10Å
CBOH11sing1.09Å1.10Å
CAUH12sing1.09Å1.10Å
CAUH13sing1.09Å1.10Å
CAAH14sing1.05Å1.06Å
CASH15sing1.08Å1.08Å
CAQH16sing1.08Å1.08Å
CARH17sing1.08Å1.08Å
CAPH18sing1.08Å1.08Å
NBDH19sing0.97Å1.00Å
CBTH20sing1.09Å1.10Å
OADH21sing0.97Å0.95Å
CAZH22sing1.09Å1.10Å
CAZH23sing1.09Å1.10Å
CAXH24sing1.09Å1.10Å
CAXH25sing1.09Å1.10Å
NH26sing0.97Å1.00Å
CAH27sing1.09Å1.10Å
OXTH28sing0.97Å0.95Å
CBH29sing1.09Å1.10Å
CBH30sing1.09Å1.10Å
CGH31sing1.09Å1.10Å
CGH32sing1.09Å1.10Å
OE2H33sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
OCOXT122.5°120.0°
OCCA119.3°120.0°
OXTCCA118.2°120.0°
COXTH28109.5°117.0°
CCACB107.8°109.5°
CCAN107.8°109.5°
CCAH27111.1°109.5°
OE1CDCG117.7°120.0°
OE1CDOE2123.0°120.0°
CBCGCD107.9°109.5°
CGCBCA111.1°109.5°
CGCBH29109.0°109.5°
CGCBH30109.0°109.4°
CBCGH31109.9°109.5°
CBCGH32109.9°109.5°
CGCDOE2119.3°120.0°
CDCGH31109.9°109.4°
CDCGH32109.8°109.5°
CBCAN107.6°109.5°
CBCAH27110.9°109.5°
CACBH29109.0°109.5°
CACBH30109.1°109.5°
CDOE2H33109.5°117.0°
CANCBH124.0°120.0°
CANH26118.0°120.0°
NCAH27111.6°109.5°
NCBHOAE123.8°120.0°
NCBHCAX114.0°120.0°
CBHNH26118.0°120.0°
OAECBHCAX122.1°120.0°
CBHCAXCAZ112.7°109.5°
CBHCAXH24108.6°109.5°
CBHCAXH25108.7°109.5°
CAXCAZCBT109.9°109.4°
CAXCAZH22109.4°109.4°
CAXCAZH23109.3°109.5°
CAZCAXH24108.7°109.5°
CAZCAXH25108.6°109.5°
CAZCBTCBG111.5°109.4°
CAZCBTNBD104.6°109.5°
CAZCBTH20110.4°109.5°
CBTCAZH22109.4°109.5°
CBTCAZH23109.4°109.5°
OAKCBGCBT120.1°120.0°
OAKCBGOAD121.8°120.0°
CBTCBGOAD118.1°120.0°
CBGCBTNBD107.2°109.4°
CBGCBTH20111.0°109.5°
CBGOADH21109.5°117.0°
CBTNBDCBJ120.7°120.0°
CBTNBDH19119.7°120.0°
NBDCBTH20111.9°109.5°
NBDCBJOAG121.7°120.0°
NBDCBJCBP119.7°120.0°
CBJNBDH19119.6°120.0°
OAGCBJCBP118.7°120.0°
CBJCBPCAQ120.1°120.1°
CBJCBPCAP118.0°120.1°
CAQCBPCAP121.9°119.8°
CBPCAQCAS118.6°120.0°
CBPCAQH16120.7°120.0°
CBPCAPCAR119.8°119.9°
CBPCAPH18120.1°120.0°
CAQCASCBQ121.3°120.0°
CAQCASH15119.4°120.0°
CASCAQH16120.7°120.0°
CAPCARCBQ118.5°120.1°
CAPCARH17120.8°120.0°
CARCAPH18120.1°120.0°
CASCBQCAR119.9°120.2°
CASCBQNBU118.8°119.9°
CBQCASH15119.4°120.0°
CARCBQNBU121.1°119.9°
CBQCARH17120.8°119.9°
CBQNBUCAU118.6°120.0°
CBQNBUCBO125.8°120.0°
CAUNBUCBO114.2°120.0°
NBUCAUCAL109.0°109.5°
NBUCAUH12109.6°109.5°
NBUCAUH13109.6°109.5°
NBUCBOCAM118.8°110.3°
NBUCBOCBN105.5°110.3°
NBUCBOH11111.0°110.3°
CBOCAMCAV104.3°102.5°
CAMCBOCBN100.3°105.2°
CBOCAMH9110.7°110.8°
CBOCAMH10110.7°110.8°
CAMCBOH11110.0°110.3°
CAMCAVCBK101.2°105.2°
CAMCAVH7111.5°110.3°
CAMCAVH8111.5°110.3°
CAVCAMH9110.7°110.8°
CAVCAMH10110.8°110.8°
CAUCALCAA174.0°180.0°
CALCAUH12109.6°109.4°
CALCAUH13109.6°109.5°
CBOCBNCBK109.8°109.6°
CBOCBNCAO131.5°130.0°
CBNCBOH11110.4°110.3°
CAVCBKCBN108.0°109.6°
CAVCBKCAN129.8°130.0°
CBKCAVH7111.5°110.3°
CBKCAVH8111.5°110.3°
CALCAAH14180.0°180.0°
CBKCBNCAO118.7°120.3°
CBNCBKCAN122.2°120.4°
CBNCAOCBR119.3°119.7°
CBNCAOH5120.3°120.1°
CBKCANCBM116.6°120.0°
CBKCANH6121.7°120.0°
CAOCBRCBM120.0°120.0°
CAOCBRCBI122.0°122.2°
CBRCAOH5120.4°120.2°
CANCBMCBR123.1°119.5°
CANCBMNBB118.1°122.1°
CBMCANH6121.7°120.0°
CBMCBRCBI118.0°117.9°
CBRCBMNBB118.7°118.4°
CBRCBIOAF123.4°121.0°
CBRCBINBA120.3°118.1°
OAFCBINBA116.3°120.9°
CBMNBBCBL122.1°120.5°
CBMNBBH4119.0°119.7°
CBINBACBL120.4°121.7°
OAHCATCBL103.3°109.5°
OAHCATH1111.0°109.5°
OAHCATH2111.0°109.5°
CATOAHH3109.5°114.0°
NBBCBLNBA120.5°123.4°
NBBCBLCAT121.9°118.3°
CBLNBBH4118.9°119.8°
NBACBLCAT117.6°118.3°
CBLCATH1111.0°109.4°
CBLCATH2111.0°109.4°
H1CATH2109.4°109.5°
H7CAVH8109.5°110.3°
H9CAMH10109.4°110.8°
H12CAUH13109.5°109.4°
H22CAZH23109.5°109.5°
H24CAXH25109.5°109.5°
H29CBH30109.5°109.5°
H31CGH32109.5°109.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
OCOXTCA179.2°180.0°
OCCACB73.8°120.0°
OCCAN170.4°0.0°
OCCAH2747.8°120.0°
OCOXTH280.0°0.0°
OXTCCACB107.0°60.0°
OXTCCAN8.8°180.0°
OXTCCAH27131.4°60.0°
CCACBCG51.9°175.0°
CCACBN115.9°120.0°
CCACBH27121.7°120.0°
CCANH27122.2°120.0°
CCANCBH179.1°85.0°
CCANH260.9°95.0°
CACOXTH28179.2°180.0°
CCACBH2968.3°55.0°
CCACBH30172.2°65.0°
OE1CDCGCB43.0°0.0°
OE1CDCGOE2180.0°180.0°
OE1CDCGH3176.7°120.0°
OE1CDCGH32162.8°120.0°
OE1CDOE2H330.0°0.0°
CBCGCDH31119.7°120.0°
CBCGCDH32119.7°120.0°
CGCBCAH29120.2°120.0°
CGCBCAH30120.2°119.9°
CBCGCDOE2137.0°180.0°
CGCBCAN64.0°65.0°
CGCBCAH27173.7°55.0°
CGCBH29H30119.2°120.0°
CBCGH31H32120.7°120.0°
CDCGCBCA149.1°180.0°
CDCGCBH2990.7°60.0°
CDCGCBH3028.8°60.0°
CDCGH31H32120.7°120.0°
CGCDOE2H33180.0°180.0°
CBCANH27121.8°120.0°
CBCANCBH65.0°155.0°
CBCANH26115.0°25.0°
CACBH29H30119.3°120.0°
CACBCGH3191.2°60.0°
CACBCGH3229.3°60.0°
OE2CDCGH31103.3°60.0°
OE2CDCGH3217.2°60.0°
CANCBHH26180.0°180.0°
CANCBHOAE0.2°0.0°
CANCBHCAX179.8°180.0°
NCACBH29175.8°175.0°
NCACBH3056.2°55.0°
NCBHOAECAX180.0°180.0°
NCBHCAXCAZ91.4°180.0°
NCBHCAXH2429.1°60.0°
NCBHCAXH25148.1°60.0°
CBHNCAH2756.9°35.0°
OAECBHCAXCAZ88.6°0.0°
OAECBHCAXH24150.9°120.0°
OAECBHCAXH2531.9°120.0°
OAECBHNH26179.8°180.0°
CBHCAXCAZH24120.5°120.0°
CBHCAXCAZH25120.5°120.0°
CBHCAXCAZCBT175.6°180.0°
CBHCAXCAZH2255.5°60.0°
CBHCAXCAZH2364.3°60.0°
CBHCAXH24H25118.5°120.0°
CAXCBHNH260.2°0.0°
CAXCAZCBTH22120.1°120.0°
CAXCAZCBTH23120.1°120.0°
CAXCAZCBTCBG62.6°175.0°
CAXCAZCBTNBD52.9°65.0°
CAXCAZCBTH20173.4°55.0°
CAXCAZH22H23119.8°120.0°
CAZCAXH24H25118.5°120.0°
CAZCBTCBGOAK65.4°120.0°
CAZCBTCBGNBD113.9°120.0°
CAZCBTCBGH20123.6°120.0°
CAZCBTCBGOAD114.1°60.0°
CAZCBTNBDH20119.6°120.1°
CAZCBTNBDCBJ78.2°155.0°
CAZCBTNBDH19101.8°24.9°
CBTCAZH22H23119.8°120.1°
CBTCAZCAXH2463.9°60.0°
CBTCAZCAXH2555.1°60.0°
OAKCBGCBTOAD179.5°179.9°
OAKCBGCBTNBD179.3°0.0°
OAKCBGCBTH2058.2°119.9°
OAKCBGOADH210.0°0.1°
CBGCBTNBDH20121.9°120.0°
CBGCBTNBDCBJ163.2°85.1°
CBGCBTNBDH1916.8°95.1°
CBTCBGOADH21179.5°180.0°
CBGCBTCAZH22177.3°65.0°
CBGCBTCAZH2357.4°55.0°
OADCBGCBTNBD0.2°180.0°
OADCBGCBTH20122.2°60.0°
CBTNBDCBJH19180.0°179.9°
CBTNBDCBJOAG1.0°0.1°
CBTNBDCBJCBP179.8°180.0°
NBDCBTCAZH2267.2°54.9°
NBDCBTCAZH23173.0°175.0°
NBDCBJOAGCBP178.8°180.0°
NBDCBJCBPCAQ4.8°180.0°
NBDCBJCBPCAP176.1°0.3°
CBJNBDCBTH2041.3°34.9°
OAGCBJCBPCAQ176.4°0.0°
OAGCBJCBPCAP2.7°179.7°
OAGCBJNBDH19179.0°179.9°
CBJCBPCAQCAP179.1°179.7°
CBJCBPCAQCAS179.9°180.0°
CBJCBPCAPCAR179.7°180.0°
CBJCBPCAQH160.1°0.0°
CBJCBPCAPH180.3°0.0°
CBPCBJNBDH190.2°0.1°
CBPCAQCASH16180.0°180.0°
CAQCBPCAPCAR0.6°0.3°
CBPCAQCASCBQ0.5°0.0°
CBPCAQCASH15179.5°180.0°
CAQCBPCAPH18179.4°179.8°
CAPCBPCAQCAS0.8°0.3°
CBPCAPCARH18180.0°179.9°
CBPCAPCARCBQ0.8°0.0°
CAPCBPCAQH16179.2°179.7°
CBPCAPCARH17179.2°180.0°
CAQCASCBQH15180.0°180.0°
CAQCASCBQCAR1.9°0.3°
CAQCASCBQNBU177.4°180.0°
CAPCARCBQCAS2.1°0.3°
CAPCARCBQH17180.0°180.0°
CAPCARCBQNBU177.4°180.0°
CASCBQCARNBU175.3°179.7°
CASCBQNBUCAU4.6°5.7°
CASCBQNBUCBO170.2°174.3°
CBQCASCAQH16179.5°180.0°
CASCBQCARH17177.9°179.7°
CARCBQNBUCAU180.0°174.6°
CARCBQNBUCBO14.4°5.4°
CARCBQCASH15178.1°179.7°
CBQCARCAPH18179.2°180.0°
CBQNBUCAUCBO167.2°180.0°
CBQNBUCBOCAM71.8°116.4°
CBQNBUCAUCAL82.3°90.0°
CBQNBUCBOCBN39.6°127.8°
CBQNBUCBOH11159.2°5.7°
CBQNBUCAUH1237.6°30.0°
CBQNBUCAUH13157.8°150.0°
NBUCBQCASH152.7°0.0°
NBUCBQCARH172.6°0.0°
CAUNBUCBOCAM122.1°63.5°
NBUCAUCALH12119.9°120.0°
NBUCAUCALH13119.9°120.0°
CAUNBUCBOCBN126.5°52.3°
NBUCAUCALCAA136.5°64.7°
CAUNBUCBOH116.9°174.3°
NBUCAUH12H13120.2°120.0°
NBUCBOCAMCBN114.2°118.9°
NBUCBOCAMH11129.5°122.2°
NBUCBOCAMCAV152.2°92.4°
CBONBUCAUCAL84.9°90.0°
NBUCBOCBNH11120.0°122.1°
NBUCBOCBNCBK146.8°101.7°
NBUCBOCBNCAO30.8°78.6°
NBUCBOCAMH988.6°25.8°
NBUCBOCAMH1032.9°149.3°
CBONBUCAUH12155.2°150.0°
CBONBUCAUH1335.0°30.0°
CBOCAMCAVH9119.2°118.2°
CBOCAMCAVH10119.2°118.3°
CAMCBOCBNH11116.0°118.9°
CBOCAMCAVCBK39.3°26.5°
CAMCBOCBNCBK22.8°17.3°
CAMCBOCBNCAO154.8°162.4°
CBOCAMCAVH779.3°92.4°
CBOCAMCAVH8157.9°145.5°
CBOCAMH9H10122.4°123.5°
CAVCAMCBOCBN38.0°26.6°
CAMCAVCBKH7118.6°118.9°
CAMCAVCBKH8118.6°119.0°
CAMCAVCBKCBN24.9°17.3°
CAMCAVCBKCAN153.0°162.7°
CAMCAVH7H8123.9°122.1°
CAVCAMH9H10122.4°123.5°
CAVCAMCBOH1178.3°145.5°
CALCAUH12H13120.3°120.0°
CAUCALCAAH1440.7°169.0°
CBOCBNCBKCAV1.4°0.0°
CBOCBNCBKCAO178.0°179.8°
CBOCBNCBKCAN176.7°180.0°
CBOCBNCAOCBR176.4°179.9°
CBOCBNCAOH53.6°0.0°
CBNCBOCAMH9157.1°144.8°
CBNCBOCAMH1081.3°91.7°
CAVCBKCBNCAN178.1°180.0°
CAVCBKCBNCAO179.3°179.7°
CAVCBKCANCBM178.0°180.0°
CAVCBKCANH62.1°0.0°
CBKCAVH7H8123.9°122.1°
CBKCAVCAMH9158.5°144.8°
CBKCAVCAMH1079.9°91.8°
CAACALCAUH1216.6°175.3°
CAACALCAUH13103.5°55.3°
CBKCBNCAOCBR1.0°0.2°
CBNCBKCANCBM0.3°0.0°
CBKCBNCAOH5179.0°179.7°
CBNCBKCANH6179.7°180.0°
CBNCBKCAVH793.8°101.7°
CBNCBKCAVH8143.5°136.2°
CBKCBNCBOH1193.1°136.3°
CAOCBNCBKCAN1.2°0.3°
CBNCAOCBRH5180.0°179.9°
CBNCAOCBRCBM0.1°0.1°
CBNCAOCBRCBI178.9°179.5°
CAOCBNCBOH1189.2°43.5°
CBKCANCBMH6180.0°180.0°
CBKCANCBMCBR0.8°0.3°
CBKCANCBMNBB179.5°180.0°
CANCBKCAVH788.3°78.3°
CANCBKCAVH834.4°43.8°
CAOCBRCBMCAN1.1°0.3°
CAOCBRCBMCBI178.8°179.5°
CAOCBRCBIOAF1.0°0.4°
CAOCBRCBMNBB179.3°179.9°
CAOCBRCBINBA177.7°180.0°
CANCBMCBRNBB179.6°179.8°
CANCBMCBRCBI179.9°179.8°
CANCBMNBBCBL178.4°180.0°
CANCBMNBBH41.6°0.1°
CBMCBRCBIOAF179.8°179.9°
CBMCBRCBINBA1.1°0.5°
CBRCBMNBBCBL1.9°0.2°
CBRCBMNBBH4178.0°179.9°
CBMCBRCAOH5179.9°180.0°
CBRCBMCANH6179.1°179.7°
CBRCBIOAFNBA178.8°179.7°
CBICBRCBMNBB0.5°0.4°
CBRCBINBACBL1.3°0.3°
CBICBRCAOH51.2°0.5°
OAFCBINBACBL179.9°179.9°
CBMNBBCBLH4180.0°179.9°
CBMNBBCBLNBA1.8°0.0°
CBMNBBCBLCAT179.6°180.0°
NBBCBMCANH60.5°0.0°
CBINBACBLNBB0.1°0.0°
CBINBACBLCAT178.8°180.0°
OAHCATCBLNBB136.9°180.0°
OAHCATCBLNBA44.5°0.0°
OAHCATCBLH1119.0°120.0°
OAHCATCBLH2119.0°120.0°
OAHCATH1H2122.8°120.1°
NBBCBLNBACAT178.6°180.0°
NBBCBLCATH117.9°60.0°
NBBCBLCATH2104.1°60.0°
NBACBLCATH1163.5°120.1°
NBACBLCATH274.5°120.0°
NBACBLNBBH4178.2°179.9°
CBLCATH1H2122.9°119.9°
CBLCATOAHH3180.0°180.0°
CATCBLNBBH40.4°0.1°
H1CATOAHH361.0°60.0°
H2CATOAHH361.0°60.1°
H7CAVCAMH939.8°25.8°
H7CAVCAMH10161.5°149.3°
H8CAVCAMH982.9°96.3°
H8CAVCAMH1038.7°27.2°
H9CAMCBOH1140.9°96.3°
H10CAMCBOH11162.5°27.2°
H15CASCAQH160.5°0.0°
H17CARCAPH180.8°0.1°
H19NBDCBTH20138.7°144.9°
H20CBTCAZH2253.3°175.0°
H20CBTCAZH2366.5°65.0°
H22CAZCAXH24176.0°180.0°
H22CAZCAXH2565.0°60.0°
H23CAZCAXH2456.2°60.0°
H23CAZCAXH25175.2°180.0°
H26NCAH27123.1°145.0°
H27CACBH2953.5°65.0°
H27CACBH3066.1°175.0°
H29CBCGH3129.0°NaN°
H29CBCGH32149.6°60.0°
H30CBCGH31148.6°60.0°
H30CBCGH3290.9°180.0°

222415

PDB entries from 2024-07-10

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