1JL
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
C27 | C3 | sing | 1.51Å | 1.49Å | |
C23 | C24 | doub | 1.38Å | 1.43Å | Aromatic |
C23 | C22 | sing | 1.38Å | 1.43Å | Aromatic |
C24 | C25 | sing | 1.38Å | 1.42Å | Aromatic |
C22 | C21 | doub | 1.39Å | 1.43Å | Aromatic |
C3 | C2 | doub | 1.38Å | 1.43Å | Aromatic |
C3 | C4 | sing | 1.38Å | 1.43Å | Aromatic |
C25 | C26 | doub | 1.38Å | 1.43Å | Aromatic |
C2 | C1 | sing | 1.38Å | 1.41Å | Aromatic |
C4 | C5 | doub | 1.38Å | 1.41Å | Aromatic |
C21 | C26 | sing | 1.39Å | 1.44Å | Aromatic |
C21 | O20 | sing | 1.36Å | 1.43Å | |
C14 | C13 | doub | 1.37Å | 1.39Å | Aromatic |
C14 | C15 | sing | 1.39Å | 1.42Å | Aromatic |
C1 | C6 | doub | 1.38Å | 1.42Å | Aromatic |
C13 | C12 | sing | 1.40Å | 1.42Å | Aromatic |
C5 | C6 | sing | 1.38Å | 1.42Å | Aromatic |
O20 | C15 | sing | 1.36Å | 1.40Å | |
C15 | C16 | doub | 1.39Å | 1.44Å | Aromatic |
C6 | S7 | sing | 1.76Å | 1.77Å | |
C12 | C17 | sing | 1.47Å | 1.46Å | |
C12 | C11 | doub | 1.41Å | 1.46Å | Aromatic |
O19 | C17 | doub | 1.22Å | 1.36Å | |
C17 | O18 | sing | 1.35Å | 1.23Å | |
C16 | C11 | sing | 1.39Å | 1.44Å | Aromatic |
C11 | N10 | sing | 1.39Å | 1.50Å | |
S7 | N10 | sing | 1.66Å | 1.78Å | |
S7 | O9 | doub | 1.42Å | 1.47Å | |
S7 | O8 | doub | 1.42Å | 1.47Å | |
C1 | H1 | sing | 1.08Å | 1.08Å | |
C2 | H2 | sing | 1.08Å | 1.08Å | |
C4 | H3 | sing | 1.08Å | 1.08Å | |
C5 | H4 | sing | 1.08Å | 1.08Å | |
N10 | H5 | sing | 0.97Å | 1.00Å | |
C13 | H6 | sing | 1.08Å | 1.08Å | |
C14 | H7 | sing | 1.08Å | 1.08Å | |
C16 | H8 | sing | 1.08Å | 1.08Å | |
O18 | H9 | sing | 0.97Å | 0.95Å | |
C22 | H10 | sing | 1.08Å | 1.08Å | |
C23 | H11 | sing | 1.08Å | 1.08Å | |
C24 | H12 | sing | 1.08Å | 1.08Å | |
C25 | H13 | sing | 1.08Å | 1.08Å | |
C26 | H14 | sing | 1.08Å | 1.08Å | |
C27 | H15 | sing | 1.09Å | 1.10Å | |
C27 | H16 | sing | 1.09Å | 1.10Å | |
C27 | H17 | sing | 1.09Å | 1.10Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
C27 | C3 | C2 | 119.9° | 120.1° |
C27 | C3 | C4 | 120.4° | 120.0° |
C3 | C27 | H15 | 109.5° | 109.4° |
C3 | C27 | H16 | 109.5° | 109.5° |
C3 | C27 | H17 | 109.5° | 109.4° |
C24 | C23 | C22 | 120.5° | 120.0° |
C23 | C24 | C25 | 119.9° | 120.1° |
C24 | C23 | H11 | 119.7° | 120.0° |
C23 | C24 | H12 | 120.0° | 119.9° |
C23 | C22 | C21 | 120.0° | 120.0° |
C23 | C22 | H10 | 120.0° | 120.0° |
C22 | C23 | H11 | 119.7° | 120.0° |
C24 | C25 | C26 | 120.0° | 120.1° |
C25 | C24 | H12 | 120.0° | 119.9° |
C24 | C25 | H13 | 120.0° | 120.0° |
C22 | C21 | C26 | 119.1° | 119.8° |
C22 | C21 | O20 | 124.1° | 120.1° |
C21 | C22 | H10 | 120.0° | 120.0° |
C2 | C3 | C4 | 119.7° | 119.9° |
C3 | C2 | C1 | 120.1° | 120.0° |
C3 | C2 | H2 | 120.0° | 119.9° |
C3 | C4 | C5 | 120.5° | 120.0° |
C3 | C4 | H3 | 119.7° | 120.0° |
C25 | C26 | C21 | 120.4° | 119.9° |
C26 | C25 | H13 | 120.0° | 120.0° |
C25 | C26 | H14 | 119.8° | 120.1° |
C2 | C1 | C6 | 119.5° | 120.0° |
C2 | C1 | H1 | 120.3° | 120.0° |
C1 | C2 | H2 | 120.0° | 120.0° |
C4 | C5 | C6 | 119.0° | 120.0° |
C5 | C4 | H3 | 119.7° | 120.0° |
C4 | C5 | H4 | 120.5° | 120.0° |
C26 | C21 | O20 | 116.8° | 120.1° |
C21 | C26 | H14 | 119.8° | 120.0° |
C21 | O20 | C15 | 122.3° | 118.0° |
C13 | C14 | C15 | 120.1° | 120.5° |
C14 | C13 | C12 | 121.0° | 120.1° |
C14 | C13 | H6 | 119.5° | 120.0° |
C13 | C14 | H7 | 119.9° | 119.7° |
C14 | C15 | O20 | 121.8° | 119.9° |
C14 | C15 | C16 | 120.5° | 120.3° |
C15 | C14 | H7 | 119.9° | 119.8° |
C1 | C6 | C5 | 121.2° | 120.0° |
C1 | C6 | S7 | 119.5° | 120.0° |
C6 | C1 | H1 | 120.3° | 120.0° |
C13 | C12 | C17 | 118.2° | 120.2° |
C13 | C12 | C11 | 120.7° | 119.7° |
C12 | C13 | H6 | 119.5° | 119.9° |
C5 | C6 | S7 | 119.3° | 120.0° |
C6 | C5 | H4 | 120.5° | 120.0° |
O20 | C15 | C16 | 117.8° | 119.8° |
C15 | C16 | C11 | 120.1° | 119.9° |
C15 | C16 | H8 | 120.0° | 120.0° |
C6 | S7 | N10 | 106.4° | 107.3° |
C6 | S7 | O9 | 105.7° | 106.4° |
C6 | S7 | O8 | 106.9° | 106.4° |
C17 | C12 | C11 | 121.1° | 120.1° |
C12 | C17 | O19 | 113.2° | 120.1° |
C12 | C17 | O18 | 124.8° | 120.0° |
C12 | C11 | C16 | 117.7° | 119.6° |
C12 | C11 | N10 | 120.4° | 120.2° |
O19 | C17 | O18 | 122.0° | 120.0° |
C17 | O18 | H9 | 109.5° | 117.0° |
C16 | C11 | N10 | 121.9° | 120.2° |
C11 | C16 | H8 | 120.0° | 120.1° |
C11 | N10 | S7 | 125.7° | 120.0° |
C11 | N10 | H5 | 105.3° | 119.9° |
N10 | S7 | O9 | 110.1° | 106.4° |
N10 | S7 | O8 | 109.2° | 106.4° |
S7 | N10 | H5 | 105.3° | 120.0° |
O9 | S7 | O8 | 117.8° | 123.1° |
H15 | C27 | H16 | 109.5° | 109.4° |
H15 | C27 | H17 | 109.4° | 109.5° |
H16 | C27 | H17 | 109.5° | 109.5° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
C27 | C3 | C2 | C4 | 179.9° | 180.0° |
C27 | C3 | C2 | C1 | 180.0° | 179.9° |
C27 | C3 | C4 | C5 | 180.0° | 179.9° |
C27 | C3 | C2 | H2 | 0.0° | 0.0° |
C27 | C3 | C4 | H3 | 0.0° | 0.1° |
C3 | C27 | H15 | H16 | 120.0° | 120.0° |
C3 | C27 | H15 | H17 | 120.0° | 119.9° |
C3 | C27 | H16 | H17 | 120.0° | 120.0° |
C24 | C23 | C22 | H11 | 180.0° | 180.0° |
C23 | C24 | C25 | H12 | 180.0° | 180.0° |
C24 | C23 | C22 | C21 | 0.2° | 0.0° |
C23 | C24 | C25 | C26 | 0.3° | 0.0° |
C24 | C23 | C22 | H10 | 179.8° | 180.0° |
C23 | C24 | C25 | H13 | 179.7° | 179.9° |
C22 | C23 | C24 | C25 | 0.3° | 0.0° |
C23 | C22 | C21 | H10 | 180.0° | 180.0° |
C23 | C22 | C21 | C26 | 0.0° | 0.1° |
C23 | C22 | C21 | O20 | 179.9° | 179.7° |
C22 | C23 | C24 | H12 | 179.6° | 180.0° |
C24 | C25 | C26 | H13 | 180.0° | 179.9° |
C24 | C25 | C26 | C21 | 0.2° | 0.0° |
C25 | C24 | C23 | H11 | 179.7° | 180.0° |
C24 | C25 | C26 | H14 | 179.8° | 179.7° |
C22 | C21 | C26 | C25 | 0.0° | 0.0° |
C22 | C21 | C26 | O20 | 180.0° | 179.8° |
C22 | C21 | O20 | C15 | 87.9° | 176.0° |
C21 | C22 | C23 | H11 | 179.8° | 180.0° |
C22 | C21 | C26 | H14 | 180.0° | 179.7° |
C3 | C2 | C1 | H2 | 180.0° | 180.0° |
C2 | C3 | C4 | C5 | 0.1° | 0.0° |
C3 | C2 | C1 | C6 | 0.1° | 0.0° |
C3 | C2 | C1 | H1 | 179.9° | 179.8° |
C2 | C3 | C4 | H3 | 179.9° | 179.9° |
C2 | C3 | C27 | H15 | 90.0° | 90.0° |
C2 | C3 | C27 | H16 | 150.0° | 150.0° |
C2 | C3 | C27 | H17 | 29.9° | 30.0° |
C4 | C3 | C2 | C1 | 0.1° | 0.0° |
C3 | C4 | C5 | H3 | 180.0° | 179.9° |
C3 | C4 | C5 | C6 | 0.0° | 0.0° |
C4 | C3 | C2 | H2 | 180.0° | 180.0° |
C3 | C4 | C5 | H4 | 179.9° | 180.0° |
C4 | C3 | C27 | H15 | 90.0° | 90.0° |
C4 | C3 | C27 | H16 | 30.0° | 30.0° |
C4 | C3 | C27 | H17 | 150.0° | 150.0° |
C25 | C26 | C21 | H14 | 180.0° | 179.7° |
C25 | C26 | C21 | O20 | 179.9° | 179.7° |
C26 | C25 | C24 | H12 | 179.6° | 180.0° |
C2 | C1 | C6 | H1 | 180.0° | 179.7° |
C2 | C1 | C6 | C5 | 0.1° | 0.0° |
C2 | C1 | C6 | S7 | 179.8° | 179.7° |
C4 | C5 | C6 | C1 | 0.1° | 0.0° |
C4 | C5 | C6 | H4 | 180.0° | 180.0° |
C4 | C5 | C6 | S7 | 179.9° | 179.7° |
C26 | C21 | O20 | C15 | 92.1° | 4.2° |
C26 | C21 | C22 | H10 | 179.9° | 179.9° |
C21 | C26 | C25 | H13 | 179.8° | 180.0° |
C21 | O20 | C15 | C14 | 16.6° | 102.9° |
C21 | O20 | C15 | C16 | 163.8° | 77.4° |
O20 | C21 | C22 | H10 | 0.1° | 0.3° |
O20 | C21 | C26 | H14 | 0.1° | 0.1° |
C13 | C14 | C15 | H7 | 180.0° | 180.0° |
C14 | C13 | C12 | H6 | 180.0° | 180.0° |
C13 | C14 | C15 | O20 | 179.7° | 180.0° |
C13 | C14 | C15 | C16 | 0.2° | 0.3° |
C14 | C13 | C12 | C17 | 179.7° | 180.0° |
C14 | C13 | C12 | C11 | 0.3° | 0.1° |
C15 | C14 | C13 | C12 | 0.2° | 0.1° |
C14 | C15 | O20 | C16 | 179.5° | 179.7° |
C14 | C15 | C16 | C11 | 0.2° | 0.6° |
C15 | C14 | C13 | H6 | 179.8° | 180.0° |
C14 | C15 | C16 | H8 | 179.8° | 180.0° |
C1 | C6 | C5 | S7 | 180.0° | 179.7° |
C1 | C6 | S7 | N10 | 93.5° | 90.0° |
C1 | C6 | S7 | O9 | 23.6° | 23.6° |
C1 | C6 | S7 | O8 | 149.8° | 156.5° |
C6 | C1 | C2 | H2 | 179.9° | 180.0° |
C1 | C6 | C5 | H4 | 179.9° | 180.0° |
C13 | C12 | C17 | C11 | 180.0° | 179.9° |
C13 | C12 | C17 | O19 | 33.1° | 180.0° |
C13 | C12 | C17 | O18 | 146.3° | 0.1° |
C13 | C12 | C11 | C16 | 0.3° | 0.3° |
C13 | C12 | C11 | N10 | 179.7° | 180.0° |
C12 | C13 | C14 | H7 | 179.8° | 180.0° |
C5 | C6 | S7 | N10 | 86.5° | 90.3° |
C5 | C6 | S7 | O9 | 156.5° | 156.2° |
C5 | C6 | S7 | O8 | 30.2° | 23.3° |
C5 | C6 | C1 | H1 | 179.9° | 179.7° |
C6 | C5 | C4 | H3 | 179.9° | 179.9° |
O20 | C15 | C16 | C11 | 179.7° | 179.7° |
O20 | C15 | C14 | H7 | 0.3° | 0.0° |
O20 | C15 | C16 | H8 | 0.3° | 0.3° |
C15 | C16 | C11 | C12 | 0.2° | 0.6° |
C15 | C16 | C11 | H8 | 180.0° | 179.4° |
C15 | C16 | C11 | N10 | 179.7° | 179.8° |
C16 | C15 | C14 | H7 | 179.8° | 179.7° |
C6 | S7 | N10 | C11 | 46.8° | 61.1° |
C6 | S7 | N10 | O9 | 114.1° | 113.6° |
C6 | S7 | N10 | O8 | 115.1° | 113.6° |
C6 | S7 | O9 | O8 | 119.3° | 123.0° |
S7 | C6 | C1 | H1 | 0.2° | 0.0° |
S7 | C6 | C5 | H4 | 0.1° | 0.3° |
C6 | S7 | N10 | H5 | 75.4° | 118.9° |
C12 | C17 | O19 | O18 | 179.4° | 180.0° |
C17 | C12 | C11 | C16 | 179.7° | 179.8° |
C17 | C12 | C11 | N10 | 0.3° | 0.1° |
C17 | C12 | C13 | H6 | 0.3° | 0.1° |
C12 | C17 | O18 | H9 | 179.4° | 180.0° |
C11 | C12 | C17 | O19 | 146.9° | 0.1° |
C11 | C12 | C17 | O18 | 33.7° | 180.0° |
C12 | C11 | C16 | N10 | 179.4° | 179.6° |
C12 | C11 | N10 | S7 | 134.6° | 143.9° |
C12 | C11 | N10 | H5 | 12.4° | 36.1° |
C11 | C12 | C13 | H6 | 179.7° | 179.9° |
C12 | C11 | C16 | H8 | 179.8° | 180.0° |
O19 | C17 | O18 | H9 | 0.0° | 0.0° |
C16 | C11 | N10 | S7 | 46.0° | 35.7° |
C16 | C11 | N10 | H5 | 168.2° | 144.3° |
C11 | N10 | S7 | H5 | 122.2° | 180.0° |
C11 | N10 | S7 | O9 | 67.3° | 174.7° |
C11 | N10 | S7 | O8 | 161.9° | 52.5° |
N10 | C11 | C16 | H8 | 0.4° | 0.3° |
N10 | S7 | O9 | O8 | 126.2° | 122.9° |
O9 | S7 | N10 | H5 | 170.5° | 5.3° |
O8 | S7 | N10 | H5 | 39.7° | 127.5° |
H1 | C1 | C2 | H2 | 0.1° | 0.3° |
H3 | C4 | C5 | H4 | 0.1° | 0.1° |
H6 | C13 | C14 | H7 | 0.2° | 0.0° |
H10 | C22 | C23 | H11 | 0.2° | 0.0° |
H11 | C23 | C24 | H12 | 0.3° | 0.1° |
H12 | C24 | C25 | H13 | 0.3° | 0.1° |
H13 | C25 | C26 | H14 | 0.2° | 0.4° |
H15 | C27 | H16 | H17 | 120.0° | 120.0° |