1GD
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| O12 | C11 | doub | 1.21Å | 1.19Å | |
| C18 | C19 | doub | 1.38Å | 1.37Å | Aromatic |
| C18 | C17 | sing | 1.38Å | 1.40Å | Aromatic |
| C19 | C14 | sing | 1.38Å | 1.37Å | Aromatic |
| C11 | C13 | sing | 1.51Å | 1.55Å | |
| C11 | N10 | sing | 1.35Å | 1.42Å | |
| C17 | C16 | doub | 1.38Å | 1.40Å | Aromatic |
| C14 | C13 | sing | 1.51Å | 1.50Å | |
| C14 | C15 | doub | 1.38Å | 1.41Å | Aromatic |
| C9 | N10 | sing | 1.46Å | 1.47Å | |
| C9 | C8 | sing | 1.51Å | 1.51Å | |
| C16 | C15 | sing | 1.38Å | 1.42Å | Aromatic |
| C8 | C7 | doub | 1.38Å | 1.38Å | Aromatic |
| C8 | C20 | sing | 1.38Å | 1.41Å | Aromatic |
| C7 | C6 | sing | 1.38Å | 1.38Å | Aromatic |
| C20 | C21 | doub | 1.38Å | 1.42Å | Aromatic |
| C6 | C5 | doub | 1.38Å | 1.38Å | Aromatic |
| C21 | C5 | sing | 1.38Å | 1.40Å | Aromatic |
| C5 | S02 | sing | 1.76Å | 1.73Å | |
| N1 | S02 | sing | 1.66Å | 1.66Å | |
| O4 | S02 | doub | 1.42Å | 1.43Å | |
| S02 | O3 | doub | 1.42Å | 1.41Å | |
| C13 | H1 | sing | 1.09Å | 1.10Å | |
| C13 | H2 | sing | 1.09Å | 1.10Å | |
| C15 | H3 | sing | 1.08Å | 1.08Å | |
| C17 | H4 | sing | 1.08Å | 1.08Å | |
| C20 | H5 | sing | 1.08Å | 1.08Å | |
| C21 | H6 | sing | 1.08Å | 1.08Å | |
| N1 | H7 | sing | 0.97Å | 1.00Å | |
| N1 | H8 | sing | 0.97Å | 1.00Å | |
| C6 | H9 | sing | 1.08Å | 1.08Å | |
| C7 | H10 | sing | 1.08Å | 1.08Å | |
| C9 | H11 | sing | 1.09Å | 1.10Å | |
| C9 | H12 | sing | 1.09Å | 1.10Å | |
| N10 | H13 | sing | 0.97Å | 1.00Å | |
| C16 | H14 | sing | 1.08Å | 1.08Å | |
| C18 | H15 | sing | 1.08Å | 1.08Å | |
| C19 | H16 | sing | 1.08Å | 1.08Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| O12 | C11 | C13 | 119.1° | 120.1° |
| O12 | C11 | N10 | 121.5° | 119.9° |
| C19 | C18 | C17 | 120.7° | 120.0° |
| C18 | C19 | C14 | 122.3° | 120.0° |
| C19 | C18 | H15 | 119.6° | 120.0° |
| C18 | C19 | H16 | 118.8° | 120.0° |
| C18 | C17 | C16 | 117.3° | 120.0° |
| C18 | C17 | H4 | 121.4° | 120.1° |
| C17 | C18 | H15 | 119.6° | 120.0° |
| C19 | C14 | C13 | 121.6° | 120.0° |
| C19 | C14 | C15 | 120.1° | 120.0° |
| C14 | C19 | H16 | 118.8° | 120.0° |
| C13 | C11 | N10 | 119.4° | 120.0° |
| C11 | C13 | C14 | 113.0° | 109.4° |
| C11 | C13 | H1 | 108.6° | 109.5° |
| C11 | C13 | H2 | 108.6° | 109.5° |
| C11 | N10 | C9 | 112.8° | 120.0° |
| C11 | N10 | H13 | 123.6° | 120.0° |
| C17 | C16 | C15 | 122.7° | 120.0° |
| C16 | C17 | H4 | 121.4° | 120.0° |
| C17 | C16 | H14 | 118.7° | 120.0° |
| C13 | C14 | C15 | 118.2° | 120.0° |
| C14 | C13 | H1 | 108.6° | 109.5° |
| C14 | C13 | H2 | 108.6° | 109.5° |
| C14 | C15 | C16 | 116.8° | 120.0° |
| C14 | C15 | H3 | 121.6° | 120.0° |
| N10 | C9 | C8 | 118.5° | 109.5° |
| N10 | C9 | H11 | 107.2° | 109.4° |
| N10 | C9 | H12 | 107.2° | 109.5° |
| C9 | N10 | H13 | 123.6° | 120.0° |
| C9 | C8 | C7 | 123.9° | 120.0° |
| C9 | C8 | C20 | 118.9° | 120.0° |
| C8 | C9 | H11 | 107.2° | 109.5° |
| C8 | C9 | H12 | 107.2° | 109.5° |
| C16 | C15 | H3 | 121.6° | 120.0° |
| C15 | C16 | H14 | 118.6° | 120.0° |
| C7 | C8 | C20 | 117.1° | 120.0° |
| C8 | C7 | C6 | 121.3° | 120.0° |
| C8 | C7 | H10 | 119.3° | 120.1° |
| C8 | C20 | C21 | 119.1° | 120.0° |
| C8 | C20 | H5 | 120.4° | 120.0° |
| C7 | C6 | C5 | 125.3° | 120.0° |
| C7 | C6 | H9 | 117.3° | 120.0° |
| C6 | C7 | H10 | 119.4° | 120.0° |
| C20 | C21 | C5 | 124.0° | 120.0° |
| C21 | C20 | H5 | 120.4° | 120.0° |
| C20 | C21 | H6 | 118.0° | 120.0° |
| C6 | C5 | C21 | 113.1° | 119.9° |
| C6 | C5 | S02 | 123.8° | 120.0° |
| C5 | C6 | H9 | 117.3° | 120.0° |
| C21 | C5 | S02 | 123.1° | 120.0° |
| C5 | C21 | H6 | 118.0° | 119.9° |
| C5 | S02 | N1 | 104.4° | 107.2° |
| C5 | S02 | O4 | 107.6° | 106.4° |
| C5 | S02 | O3 | 109.3° | 106.4° |
| N1 | S02 | O4 | 107.7° | 106.4° |
| N1 | S02 | O3 | 110.2° | 106.4° |
| S02 | N1 | H7 | 109.5° | 120.0° |
| S02 | N1 | H8 | 109.5° | 120.1° |
| O4 | S02 | O3 | 117.0° | 123.2° |
| H1 | C13 | H2 | 109.5° | 109.5° |
| H7 | N1 | H8 | 109.4° | 120.0° |
| H11 | C9 | H12 | 109.5° | 109.5° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| O12 | C11 | C13 | N10 | 177.9° | 180.0° |
| O12 | C11 | C13 | C14 | 76.1° | 0.0° |
| O12 | C11 | N10 | C9 | 0.6° | 0.0° |
| O12 | C11 | C13 | H1 | 163.4° | 120.0° |
| O12 | C11 | C13 | H2 | 44.5° | 120.0° |
| O12 | C11 | N10 | H13 | 179.4° | 180.0° |
| C19 | C18 | C17 | H15 | 180.0° | 179.7° |
| C18 | C19 | C14 | H16 | 180.0° | 179.7° |
| C19 | C18 | C17 | C16 | 0.1° | 0.3° |
| C18 | C19 | C14 | C13 | 178.9° | 180.0° |
| C18 | C19 | C14 | C15 | 0.9° | 0.1° |
| C19 | C18 | C17 | H4 | 179.9° | 179.7° |
| C17 | C18 | C19 | C14 | 0.3° | 0.3° |
| C18 | C17 | C16 | H4 | 180.0° | 180.0° |
| C18 | C17 | C16 | C15 | 0.0° | 0.0° |
| C18 | C17 | C16 | H14 | 180.0° | 180.0° |
| C17 | C18 | C19 | H16 | 179.7° | 180.0° |
| C19 | C14 | C13 | C11 | 35.9° | 90.0° |
| C19 | C14 | C13 | C15 | 178.0° | 179.9° |
| C19 | C14 | C15 | C16 | 0.9° | 0.3° |
| C19 | C14 | C13 | H1 | 156.4° | 150.0° |
| C19 | C14 | C13 | H2 | 84.7° | 29.9° |
| C19 | C14 | C15 | H3 | 179.0° | 180.0° |
| C14 | C19 | C18 | H15 | 179.6° | 180.0° |
| C11 | C13 | C14 | H1 | 120.5° | 120.0° |
| C11 | C13 | C14 | H2 | 120.6° | 120.0° |
| C11 | C13 | C14 | C15 | 142.2° | 90.0° |
| C13 | C11 | N10 | C9 | 178.4° | 180.0° |
| C11 | C13 | H1 | H2 | 118.4° | 120.0° |
| C13 | C11 | N10 | H13 | 1.6° | 0.0° |
| N10 | C11 | C13 | C14 | 101.8° | 180.0° |
| C11 | N10 | C9 | H13 | 180.0° | 180.0° |
| C11 | N10 | C9 | C8 | 158.9° | 180.0° |
| N10 | C11 | C13 | H1 | 18.7° | 60.0° |
| N10 | C11 | C13 | H2 | 137.7° | 60.0° |
| C11 | N10 | C9 | H11 | 79.8° | 60.0° |
| C11 | N10 | C9 | H12 | 37.7° | 60.0° |
| C17 | C16 | C15 | C14 | 0.5° | 0.3° |
| C17 | C16 | C15 | H14 | 180.0° | 180.0° |
| C17 | C16 | C15 | H3 | 179.4° | 180.0° |
| C16 | C17 | C18 | H15 | 179.9° | 180.0° |
| C13 | C14 | C15 | C16 | 179.0° | 179.7° |
| C14 | C13 | H1 | H2 | 118.3° | 120.0° |
| C13 | C14 | C15 | H3 | 1.0° | 0.1° |
| C13 | C14 | C19 | H16 | 1.1° | 0.2° |
| C14 | C15 | C16 | H3 | 180.0° | 179.7° |
| C15 | C14 | C13 | H1 | 21.6° | 29.9° |
| C15 | C14 | C13 | H2 | 97.3° | 150.0° |
| C14 | C15 | C16 | H14 | 179.5° | 179.7° |
| C15 | C14 | C19 | H16 | 179.1° | 179.7° |
| N10 | C9 | C8 | H11 | 121.3° | 120.0° |
| N10 | C9 | C8 | H12 | 121.3° | 120.0° |
| N10 | C9 | C8 | C7 | 121.2° | 90.0° |
| N10 | C9 | C8 | C20 | 62.5° | 90.6° |
| N10 | C9 | H11 | H12 | 115.9° | 120.0° |
| C9 | C8 | C7 | C20 | 176.3° | 179.4° |
| C9 | C8 | C7 | C6 | 177.5° | 180.0° |
| C9 | C8 | C20 | C21 | 177.8° | 180.0° |
| C9 | C8 | C20 | H5 | 2.2° | 0.3° |
| C9 | C8 | C7 | H10 | 2.5° | 0.3° |
| C8 | C9 | H11 | H12 | 115.9° | 120.0° |
| C8 | C9 | N10 | H13 | 21.1° | 0.0° |
| C15 | C16 | C17 | H4 | 180.0° | 180.0° |
| C8 | C7 | C6 | H10 | 180.0° | 179.7° |
| C7 | C8 | C20 | C21 | 1.3° | 0.6° |
| C8 | C7 | C6 | C5 | 1.3° | 0.3° |
| C7 | C8 | C20 | H5 | 178.7° | 179.7° |
| C8 | C7 | C6 | H9 | 178.7° | 179.7° |
| C7 | C8 | C9 | H11 | 0.1° | 150.0° |
| C7 | C8 | C9 | H12 | 117.5° | 29.9° |
| C20 | C8 | C7 | C6 | 1.2° | 0.6° |
| C8 | C20 | C21 | H5 | 180.0° | 179.7° |
| C8 | C20 | C21 | C5 | 1.5° | 0.3° |
| C8 | C20 | C21 | H6 | 178.5° | 179.7° |
| C20 | C8 | C7 | H10 | 178.8° | 179.7° |
| C20 | C8 | C9 | H11 | 176.2° | 29.4° |
| C20 | C8 | C9 | H12 | 58.8° | 149.4° |
| C7 | C6 | C5 | H9 | 180.0° | 180.0° |
| C7 | C6 | C5 | C21 | 1.3° | 0.0° |
| C7 | C6 | C5 | S02 | 179.4° | 179.9° |
| C20 | C21 | C5 | C6 | 1.5° | 0.0° |
| C20 | C21 | C5 | H6 | 180.0° | 180.0° |
| C20 | C21 | C5 | S02 | 179.5° | 180.0° |
| C6 | C5 | C21 | S02 | 178.1° | 179.9° |
| C6 | C5 | S02 | N1 | 132.8° | 90.0° |
| C6 | C5 | S02 | O4 | 18.5° | 23.5° |
| C6 | C5 | S02 | O3 | 109.4° | 156.4° |
| C6 | C5 | C21 | H6 | 178.6° | 180.0° |
| C5 | C6 | C7 | H10 | 178.7° | 180.0° |
| C21 | C5 | S02 | N1 | 49.4° | 90.0° |
| C21 | C5 | S02 | O4 | 163.6° | 156.4° |
| C21 | C5 | S02 | O3 | 68.5° | 23.5° |
| C5 | C21 | C20 | H5 | 178.5° | 180.0° |
| C21 | C5 | C6 | H9 | 178.7° | 180.0° |
| C5 | S02 | N1 | O4 | 114.2° | 113.5° |
| C5 | S02 | N1 | O3 | 117.2° | 113.5° |
| C5 | S02 | O4 | O3 | 123.4° | 122.9° |
| S02 | C5 | C21 | H6 | 0.5° | 0.0° |
| C5 | S02 | N1 | H7 | 180.0° | 0.0° |
| C5 | S02 | N1 | H8 | 60.0° | 179.9° |
| S02 | C5 | C6 | H9 | 0.6° | 0.1° |
| N1 | S02 | O4 | O3 | 124.7° | 123.0° |
| S02 | N1 | H7 | H8 | 120.0° | 179.9° |
| O4 | S02 | N1 | H7 | 65.9° | 113.5° |
| O4 | S02 | N1 | H8 | 54.1° | 66.4° |
| O3 | S02 | N1 | H7 | 62.8° | 113.5° |
| O3 | S02 | N1 | H8 | 177.2° | 66.5° |
| H3 | C15 | C16 | H14 | 0.6° | 0.0° |
| H4 | C17 | C16 | H14 | 0.0° | 0.0° |
| H4 | C17 | C18 | H15 | 0.1° | 0.0° |
| H5 | C20 | C21 | H6 | 1.5° | 0.0° |
| H9 | C6 | C7 | H10 | 1.2° | 0.0° |
| H11 | C9 | N10 | H13 | 100.2° | 120.0° |
| H12 | C9 | N10 | H13 | 142.3° | 120.0° |
| H15 | C18 | C19 | H16 | 0.4° | 0.3° |






