1GC
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| C2 | N1 | sing | 1.36Å | 1.37Å | |
| N1 | C6 | sing | 1.35Å | 1.39Å | |
| N1 | HN1 | sing | 0.97Å | 1.00Å | |
| N2 | C2 | sing | 1.37Å | 1.34Å | |
| N3 | C2 | doub | 1.31Å | 1.32Å | |
| N2 | HN2 | sing | 0.97Å | 1.00Å | |
| N2 | HN2A | sing | 0.97Å | 1.00Å | |
| N3 | C4 | sing | 1.34Å | 1.35Å | |
| C4 | N9 | sing | 1.37Å | 1.37Å | Aromatic |
| C4 | C5 | doub | 1.40Å | 1.38Å | Aromatic |
| C5 | C6 | sing | 1.41Å | 1.41Å | |
| C5 | N7 | sing | 1.36Å | 1.38Å | Aromatic |
| C6 | O6 | doub | 1.22Å | 1.22Å | |
| C8 | N7 | doub | 1.30Å | 1.30Å | Aromatic |
| N9 | C8 | sing | 1.36Å | 1.38Å | Aromatic |
| C8 | H8 | sing | 1.08Å | 1.08Å | |
| C1' | N9 | sing | 1.47Å | 1.46Å | |
| O5' | PA | sing | 1.61Å | 1.60Å | |
| C3A | PA | sing | 1.82Å | 1.85Å | |
| PA | O2A | doub | 1.48Å | 1.49Å | |
| PA | O1A | sing | 1.61Å | 1.50Å | |
| O1B | PB | doub | 1.48Å | 1.48Å | |
| O2B | PB | sing | 1.61Å | 1.49Å | |
| PB | O3B | sing | 1.61Å | 1.50Å | |
| PB | C3A | sing | 1.82Å | 1.85Å | |
| O3B | PG | sing | 1.61Å | 1.52Å | |
| O3G | PG | doub | 1.48Å | 1.48Å | |
| PG | O1G | sing | 1.61Å | 1.49Å | |
| PG | O2G | sing | 1.61Å | 1.49Å | |
| C2' | C1' | sing | 1.54Å | 1.53Å | |
| C1' | O4' | sing | 1.44Å | 1.42Å | |
| C1' | H1' | sing | 1.09Å | 1.10Å | |
| O1A | HO1A | sing | 0.97Å | 0.95Å | |
| O1G | HO1G | sing | 0.97Å | 0.95Å | |
| C2' | C3' | sing | 1.55Å | 1.51Å | |
| C2' | H2' | sing | 1.09Å | 1.10Å | |
| C2' | H2'A | sing | 1.09Å | 1.10Å | |
| O2B | HO2B | sing | 0.97Å | 0.95Å | |
| O2G | HO2G | sing | 0.97Å | 0.95Å | |
| O3' | C3' | sing | 1.43Å | 1.43Å | |
| C3' | C4' | sing | 1.54Å | 1.53Å | |
| C3' | H3' | sing | 1.09Å | 1.10Å | |
| O3' | HO3' | sing | 0.97Å | 0.95Å | |
| C3A | H3A | sing | 1.09Å | 1.10Å | |
| C3A | H3AA | sing | 1.09Å | 1.10Å | |
| C4' | O4' | sing | 1.44Å | 1.45Å | |
| C4' | C5' | sing | 1.53Å | 1.51Å | |
| C4' | H4' | sing | 1.09Å | 1.10Å | |
| C5' | O5' | sing | 1.43Å | 1.43Å | |
| C5' | H5' | sing | 1.09Å | 1.10Å | |
| C5' | H5'A | sing | 1.09Å | 1.10Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| C2 | N1 | C6 | 125.3° | 120.3° |
| C2 | N1 | HN1 | 117.4° | 119.8° |
| N1 | C2 | N2 | 116.8° | 119.1° |
| N1 | C2 | N3 | 123.6° | 121.9° |
| C6 | N1 | HN1 | 117.4° | 119.9° |
| N1 | C6 | C5 | 111.7° | 118.4° |
| N1 | C6 | O6 | 120.0° | 120.8° |
| N2 | C2 | N3 | 119.6° | 119.1° |
| C2 | N2 | HN2 | 120.0° | 120.0° |
| C2 | N2 | HN2A | 120.0° | 120.1° |
| C2 | N3 | C4 | 111.8° | 121.1° |
| HN2 | N2 | HN2A | 120.0° | 119.9° |
| N3 | C4 | N9 | 126.0° | 134.2° |
| N3 | C4 | C5 | 128.8° | 119.7° |
| N9 | C4 | C5 | 105.2° | 106.1° |
| C4 | N9 | C8 | 106.6° | 107.5° |
| C4 | N9 | C1' | 126.0° | 126.3° |
| C4 | C5 | C6 | 118.7° | 118.6° |
| C4 | C5 | N7 | 111.0° | 107.2° |
| C6 | C5 | N7 | 130.3° | 134.2° |
| C5 | C6 | O6 | 128.3° | 120.8° |
| C5 | N7 | C8 | 104.2° | 109.3° |
| N7 | C8 | N9 | 113.1° | 109.8° |
| N7 | C8 | H8 | 123.4° | 125.1° |
| N9 | C8 | H8 | 123.5° | 125.1° |
| C8 | N9 | C1' | 127.4° | 126.2° |
| N9 | C1' | C2' | 113.7° | 110.4° |
| N9 | C1' | O4' | 107.7° | 110.3° |
| N9 | C1' | H1' | 107.0° | 110.3° |
| O5' | PA | C3A | 110.7° | 109.5° |
| O5' | PA | O2A | 105.5° | 109.5° |
| O5' | PA | O1A | 103.9° | 109.5° |
| PA | O5' | C5' | 121.7° | 123.0° |
| C3A | PA | O2A | 109.0° | 109.5° |
| C3A | PA | O1A | 109.2° | 109.5° |
| PA | C3A | PB | 118.2° | 109.5° |
| PA | C3A | H3A | 106.6° | 109.4° |
| PA | C3A | H3AA | 106.7° | 109.5° |
| O2A | PA | O1A | 118.4° | 109.4° |
| PA | O1A | HO1A | 109.5° | 114.0° |
| O1B | PB | O2B | 118.0° | 109.5° |
| O1B | PB | O3B | 104.4° | 109.5° |
| O1B | PB | C3A | 109.5° | 109.5° |
| O2B | PB | O3B | 103.9° | 109.4° |
| O2B | PB | C3A | 110.3° | 109.4° |
| PB | O2B | HO2B | 109.5° | 114.0° |
| O3B | PB | C3A | 110.3° | 109.5° |
| PB | O3B | PG | 125.2° | 134.0° |
| PB | C3A | H3A | 106.6° | 109.4° |
| PB | C3A | H3AA | 106.6° | 109.5° |
| O3B | PG | O3G | 107.5° | 109.5° |
| O3B | PG | O1G | 109.3° | 109.4° |
| O3B | PG | O2G | 108.2° | 109.5° |
| O3G | PG | O1G | 105.8° | 109.5° |
| O3G | PG | O2G | 106.0° | 109.5° |
| O1G | PG | O2G | 119.5° | 109.5° |
| PG | O1G | HO1G | 109.5° | 114.0° |
| PG | O2G | HO2G | 109.5° | 114.0° |
| C2' | C1' | O4' | 106.9° | 104.8° |
| C2' | C1' | H1' | 107.8° | 110.5° |
| C1' | C2' | C3' | 103.0° | 104.1° |
| C1' | C2' | H2' | 111.7° | 110.5° |
| C1' | C2' | H2'A | 111.7° | 110.5° |
| O4' | C1' | H1' | 113.8° | 110.4° |
| C1' | O4' | C4' | 110.1° | 105.2° |
| C3' | C2' | H2' | 111.7° | 110.5° |
| C3' | C2' | H2'A | 111.7° | 110.5° |
| C2' | C3' | O3' | 111.0° | 110.5° |
| C2' | C3' | C4' | 102.1° | 104.1° |
| C2' | C3' | H3' | 114.0° | 110.5° |
| H2' | C2' | H2'A | 107.1° | 110.6° |
| O3' | C3' | C4' | 111.7° | 110.5° |
| O3' | C3' | H3' | 104.9° | 110.5° |
| C3' | O3' | HO3' | 109.5° | 114.0° |
| C4' | C3' | H3' | 113.4° | 110.6° |
| C3' | C4' | O4' | 105.0° | 104.8° |
| C3' | C4' | C5' | 115.1° | 110.3° |
| C3' | C4' | H4' | 108.8° | 110.4° |
| H3A | C3A | H3AA | 112.2° | 109.5° |
| O4' | C4' | C5' | 109.3° | 110.3° |
| O4' | C4' | H4' | 114.7° | 110.4° |
| C5' | C4' | H4' | 104.4° | 110.4° |
| C4' | C5' | O5' | 110.3° | 109.5° |
| C4' | C5' | H5' | 109.2° | 109.5° |
| C4' | C5' | H5'A | 109.2° | 109.5° |
| O5' | C5' | H5' | 109.2° | 109.5° |
| O5' | C5' | H5'A | 109.2° | 109.4° |
| H5' | C5' | H5'A | 109.8° | 109.4° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| C2 | N1 | C6 | HN1 | 180.0° | 179.8° |
| N1 | C2 | N2 | N3 | 179.8° | 179.9° |
| N1 | C2 | N2 | HN2 | 179.9° | 0.0° |
| N1 | C2 | N2 | HN2A | 0.2° | 180.0° |
| N1 | C2 | N3 | C4 | 0.8° | 0.1° |
| C2 | N1 | C6 | C5 | 2.1° | 0.0° |
| C2 | N1 | C6 | O6 | 176.7° | 179.7° |
| C6 | N1 | C2 | N2 | 179.2° | 180.0° |
| C6 | N1 | C2 | N3 | 1.0° | 0.1° |
| N1 | C6 | C5 | C4 | 1.5° | 0.0° |
| N1 | C6 | C5 | O6 | 178.7° | 179.7° |
| N1 | C6 | C5 | N7 | 179.5° | 180.0° |
| HN1 | N1 | C2 | N2 | 0.8° | 0.2° |
| HN1 | N1 | C2 | N3 | 179.0° | 179.7° |
| HN1 | N1 | C6 | C5 | 177.9° | 179.7° |
| HN1 | N1 | C6 | O6 | 3.3° | 0.0° |
| C2 | N2 | HN2 | HN2A | 179.9° | 180.0° |
| N2 | C2 | N3 | C4 | 179.0° | 180.0° |
| N3 | C2 | N2 | HN2 | 0.0° | 179.9° |
| N3 | C2 | N2 | HN2A | 180.0° | 0.1° |
| C2 | N3 | C4 | N9 | 179.7° | 180.0° |
| C2 | N3 | C4 | C5 | 1.4° | 0.1° |
| N3 | C4 | N9 | C5 | 179.2° | 179.9° |
| N3 | C4 | C5 | C6 | 0.1° | 0.0° |
| N3 | C4 | C5 | N7 | 179.0° | 179.9° |
| N3 | C4 | N9 | C8 | 179.0° | 179.9° |
| N3 | C4 | N9 | C1' | 0.6° | 0.1° |
| N9 | C4 | C5 | C6 | 179.3° | 179.9° |
| N9 | C4 | C5 | N7 | 0.1° | 0.0° |
| C4 | N9 | C8 | N7 | 0.2° | 0.0° |
| C4 | N9 | C8 | C1' | 179.6° | 179.9° |
| C4 | N9 | C8 | H8 | 179.8° | 179.9° |
| C4 | N9 | C1' | C2' | 98.8° | 88.2° |
| C4 | N9 | C1' | O4' | 143.0° | 156.4° |
| C4 | N9 | C1' | H1' | 20.2° | 34.2° |
| C4 | C5 | C6 | N7 | 178.9° | 179.9° |
| C4 | C5 | C6 | O6 | 177.2° | 179.7° |
| C4 | C5 | N7 | C8 | 0.0° | 0.0° |
| C5 | C4 | N9 | C8 | 0.2° | 0.0° |
| C5 | C4 | N9 | C1' | 179.8° | 179.9° |
| C6 | C5 | N7 | C8 | 179.0° | 179.9° |
| N7 | C5 | C6 | O6 | 1.8° | 0.2° |
| C5 | N7 | C8 | N9 | 0.1° | 0.0° |
| C5 | N7 | C8 | H8 | 179.9° | 180.0° |
| N7 | C8 | N9 | H8 | 180.0° | 180.0° |
| N7 | C8 | N9 | C1' | 179.8° | 179.9° |
| C8 | N9 | C1' | C2' | 80.7° | 91.9° |
| C8 | N9 | C1' | O4' | 37.5° | 23.5° |
| C8 | N9 | C1' | H1' | 160.3° | 145.7° |
| H8 | C8 | N9 | C1' | 0.3° | 0.0° |
| N9 | C1' | C2' | O4' | 118.7° | 118.8° |
| N9 | C1' | C2' | H1' | 118.5° | 122.3° |
| N9 | C1' | O4' | H1' | 118.5° | 122.2° |
| N9 | C1' | C2' | C3' | 93.7° | 142.8° |
| N9 | C1' | C2' | H2' | 146.3° | 98.5° |
| N9 | C1' | C2' | H2'A | 26.3° | 24.1° |
| N9 | C1' | O4' | C4' | 118.3° | 159.4° |
| O5' | PA | C3A | O2A | 115.5° | 120.0° |
| O5' | PA | C3A | O1A | 113.7° | 120.0° |
| O5' | PA | O2A | O1A | 115.6° | 120.0° |
| O5' | PA | C3A | PB | 69.9° | 180.0° |
| O5' | PA | O1A | HO1A | 116.4° | 60.1° |
| O5' | PA | C3A | H3A | 50.1° | 60.0° |
| O5' | PA | C3A | H3AA | 170.1° | 60.0° |
| PA | O5' | C5' | C4' | 147.2° | 180.0° |
| PA | O5' | C5' | H5' | 92.7° | 59.9° |
| PA | O5' | C5' | H5'A | 27.3° | 60.0° |
| C3A | PA | O2A | O1A | 125.6° | 120.0° |
| PA | C3A | PB | O1B | 118.3° | 60.0° |
| PA | C3A | PB | O2B | 13.2° | 60.1° |
| PA | C3A | PB | O3B | 127.4° | 180.0° |
| PA | C3A | PB | H3A | 120.0° | 119.9° |
| PA | C3A | PB | H3AA | 120.0° | 120.1° |
| C3A | PA | O1A | HO1A | 125.4° | 60.0° |
| PA | C3A | H3A | H3AA | 116.4° | 120.0° |
| C3A | PA | O5' | C5' | 92.7° | 175.0° |
| O2A | PA | C3A | PB | 45.6° | 59.9° |
| O2A | PA | O1A | HO1A | 0.0° | 180.0° |
| O2A | PA | C3A | H3A | 165.6° | 60.0° |
| O2A | PA | C3A | H3AA | 74.4° | 180.0° |
| O2A | PA | O5' | C5' | 24.9° | 55.0° |
| O1A | PA | C3A | PB | 176.3° | 60.0° |
| O1A | PA | C3A | H3A | 63.7° | 179.9° |
| O1A | PA | C3A | H3AA | 56.3° | 60.1° |
| O1A | PA | O5' | C5' | 150.2° | 64.9° |
| O1B | PB | O2B | O3B | 114.9° | 120.0° |
| O1B | PB | O2B | C3A | 126.9° | 120.0° |
| O1B | PB | O3B | C3A | 117.6° | 120.1° |
| O1B | PB | O3B | PG | 158.3° | 60.0° |
| O1B | PB | O2B | HO2B | 0.0° | 180.0° |
| O1B | PB | C3A | H3A | 1.7° | 60.0° |
| O1B | PB | C3A | H3AA | 121.7° | 180.0° |
| O2B | PB | O3B | C3A | 118.2° | 120.0° |
| O2B | PB | O3B | PG | 77.5° | 60.0° |
| O2B | PB | C3A | H3A | 133.1° | 180.0° |
| O2B | PB | C3A | H3AA | 106.8° | 60.0° |
| PB | O3B | PG | O3G | 143.9° | 40.0° |
| PB | O3B | PG | O1G | 29.5° | 80.0° |
| PB | O3B | PG | O2G | 102.1° | 160.0° |
| O3B | PB | O2B | HO2B | 115.0° | 60.0° |
| O3B | PB | C3A | H3A | 112.7° | 60.0° |
| O3B | PB | C3A | H3AA | 7.4° | 60.0° |
| C3A | PB | O3B | PG | 40.7° | 180.0° |
| C3A | PB | O2B | HO2B | 126.9° | 60.0° |
| PB | C3A | H3A | H3AA | 116.4° | 120.0° |
| O3B | PG | O3G | O1G | 116.7° | 120.0° |
| O3B | PG | O3G | O2G | 115.5° | 120.0° |
| O3B | PG | O1G | O2G | 125.3° | 120.0° |
| O3B | PG | O1G | HO1G | 115.5° | 60.0° |
| O3B | PG | O2G | HO2G | 115.0° | 180.0° |
| O3G | PG | O1G | O2G | 119.3° | 120.0° |
| O3G | PG | O1G | HO1G | 0.0° | 180.0° |
| O3G | PG | O2G | HO2G | 0.0° | 59.9° |
| O1G | PG | O2G | HO2G | 119.2° | 60.1° |
| O2G | PG | O1G | HO1G | 119.3° | 60.0° |
| C2' | C1' | O4' | H1' | 118.9° | 119.0° |
| C1' | C2' | C3' | H2' | 120.0° | 118.6° |
| C1' | C2' | C3' | H2'A | 120.0° | 118.6° |
| C1' | C2' | H2' | H2'A | 122.6° | 122.6° |
| C1' | C2' | C3' | O3' | 153.9° | 118.7° |
| C1' | C2' | C3' | C4' | 34.7° | 0.0° |
| C1' | C2' | C3' | H3' | 88.0° | 118.7° |
| C2' | C1' | O4' | C4' | 4.3° | 40.5° |
| O4' | C1' | C2' | C3' | 25.0° | 24.0° |
| O4' | C1' | C2' | H2' | 95.0° | 142.7° |
| O4' | C1' | C2' | H2'A | 145.0° | 94.7° |
| C1' | O4' | C4' | C3' | 18.2° | 40.6° |
| C1' | O4' | C4' | C5' | 142.1° | 159.3° |
| C1' | O4' | C4' | H4' | 101.2° | 78.3° |
| H1' | C1' | C2' | C3' | 147.8° | 94.9° |
| H1' | C1' | C2' | H2' | 27.8° | 23.8° |
| H1' | C1' | C2' | H2'A | 92.2° | 146.5° |
| H1' | C1' | O4' | C4' | 123.2° | 78.5° |
| C3' | C2' | H2' | H2'A | 122.6° | 122.7° |
| C2' | C3' | O3' | C4' | 113.2° | 114.7° |
| C2' | C3' | O3' | H3' | 123.6° | 122.6° |
| C2' | C3' | C4' | H3' | 123.1° | 118.6° |
| C2' | C3' | O3' | HO3' | 180.0° | 61.4° |
| C2' | C3' | C4' | O4' | 32.9° | 24.0° |
| C2' | C3' | C4' | C5' | 153.1° | 142.8° |
| C2' | C3' | C4' | H4' | 90.3° | 94.8° |
| H2' | C2' | C3' | O3' | 33.8° | 0.0° |
| H2' | C2' | C3' | C4' | 85.3° | 118.6° |
| H2' | C2' | C3' | H3' | 152.0° | 122.7° |
| H2'A | C2' | C3' | O3' | 86.1° | 122.7° |
| H2'A | C2' | C3' | C4' | 154.7° | 118.6° |
| H2'A | C2' | C3' | H3' | 32.1° | 0.1° |
| O3' | C3' | C4' | H3' | 118.2° | 122.7° |
| O3' | C3' | C4' | O4' | 151.6° | 142.7° |
| O3' | C3' | C4' | C5' | 88.2° | 98.6° |
| O3' | C3' | C4' | H4' | 28.4° | 23.8° |
| C4' | C3' | O3' | HO3' | 66.8° | 176.0° |
| C3' | C4' | O4' | C5' | 123.9° | 118.8° |
| C3' | C4' | O4' | H4' | 119.3° | 118.9° |
| C3' | C4' | C5' | H4' | 119.2° | 122.4° |
| C3' | C4' | C5' | O5' | 51.4° | 175.0° |
| C3' | C4' | C5' | H5' | 171.4° | 55.0° |
| C3' | C4' | C5' | H5'A | 68.6° | 65.0° |
| H3' | C3' | O3' | HO3' | 56.4° | 61.2° |
| H3' | C3' | C4' | O4' | 90.2° | 94.6° |
| H3' | C3' | C4' | C5' | 30.0° | 24.2° |
| H3' | C3' | C4' | H4' | 146.6° | 146.5° |
| O4' | C4' | C5' | H4' | 123.1° | 122.3° |
| O4' | C4' | C5' | O5' | 66.4° | 69.6° |
| O4' | C4' | C5' | H5' | 53.6° | 170.4° |
| O4' | C4' | C5' | H5'A | 173.6° | 50.4° |
| C4' | C5' | O5' | H5' | 120.0° | 120.1° |
| C4' | C5' | O5' | H5'A | 120.0° | 120.0° |
| C4' | C5' | H5' | H5'A | 119.7° | 120.0° |
| H4' | C4' | C5' | O5' | 170.5° | 52.7° |
| H4' | C4' | C5' | H5' | 69.5° | 67.3° |
| H4' | C4' | C5' | H5'A | 50.5° | 172.7° |
| O5' | C5' | H5' | H5'A | 119.6° | 119.9° |
