Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1AF

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C1C2sing1.54Å1.54Å
C1C5sing1.54Å1.53Å
C1H34sing1.09Å1.10Å
C1H35sing1.09Å1.10Å
C2C3sing1.55Å1.54Å
C2H37sing1.09Å1.10Å
C2H36sing1.09Å1.10Å
C3C4sing1.55Å1.54Å
C3H39sing1.09Å1.10Å
C3H38sing1.09Å1.10Å
C4C5sing1.54Å1.54Å
C4H41sing1.09Å1.10Å
C4H40sing1.09Å1.10Å
C5N6sing1.47Å1.46Å
C5H42sing1.09Å1.10Å
N6C7sing1.47Å1.34Å
N6H43sing1.01Å1.00Å
C7N8sing1.47Å1.34Å
C7C9sing1.51Å1.48Å
C7H7sing1.09Å1.10Å
N8H44sing1.01Å1.00Å
N8H45sing1.01Å1.00Å
C9C12sing1.38Å1.40ÅAromatic
C9C10doub1.38Å1.40ÅAromatic
C12C13doub1.38Å1.38ÅAromatic
C12H48sing1.08Å1.08Å
C13C14sing1.39Å1.40ÅAromatic
C13H49sing1.08Å1.08Å
C10C11sing1.38Å1.40ÅAromatic
C10H46sing1.08Å1.08Å
C11C14doub1.39Å1.40ÅAromatic
C11H47sing1.08Å1.08Å
C14C15sing1.48Å1.44ÅAromatic
C15C17doub1.36Å1.37ÅAromatic
C15C16sing1.42Å1.42ÅAromatic
C17O18sing1.34Å1.38ÅAromatic
C17H51sing1.08Å1.08Å
O18C19sing1.35Å1.39ÅAromatic
C16C19doub1.36Å1.37ÅAromatic
C16H50sing1.08Å1.08Å
C19C20sing1.48Å1.45ÅAromatic
C20C23doub1.40Å1.40ÅAromatic
C20C21sing1.40Å1.40ÅAromatic
C23C24sing1.38Å1.39ÅAromatic
C23H54sing1.08Å1.08Å
C24C25doub1.38Å1.40ÅAromatic
C24H55sing1.08Å1.08Å
C21C22doub1.38Å1.39ÅAromatic
C21H52sing1.08Å1.08Å
C22C25sing1.38Å1.40ÅAromatic
C22H53sing1.08Å1.08Å
C25C26sing1.51Å1.48Å
C26N27sing1.47Å1.33Å
C26N28sing1.47Å1.34Å
C26H26sing1.09Å1.10Å
N27H56sing1.01Å1.00Å
N27H57sing1.01Å1.00Å
N28C29sing1.47Å1.47Å
N28H58sing1.01Å1.00Å
C29C30sing1.54Å1.54Å
C29C33sing1.54Å1.55Å
C29H59sing1.09Å1.10Å
C30C31sing1.54Å1.53Å
C30H60sing1.09Å1.10Å
C30H61sing1.09Å1.10Å
C31C32sing1.55Å1.54Å
C31H62sing1.09Å1.10Å
C31H63sing1.09Å1.10Å
C32C33sing1.55Å1.54Å
C32H64sing1.09Å1.10Å
C32H65sing1.09Å1.10Å
C33H67sing1.09Å1.10Å
C33H66sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C2C1C5104.2°106.6°
C2C1H34112.4°110.1°
C2C1H35111.2°110.0°
C1C2C3105.8°104.2°
C1C2H37110.7°110.4°
C1C2H36111.5°110.5°
C5C1H34112.4°110.1°
C5C1H35111.3°110.0°
C1C5C4103.1°106.6°
C1C5N6110.8°110.1°
C1C5H42113.7°110.0°
H34C1H35105.5°110.0°
C3C2H37110.7°110.5°
C3C2H36111.5°110.5°
C2C3C4106.4°102.8°
C2C3H39110.5°110.7°
C2C3H38111.2°110.7°
H37C2H36106.7°110.6°
C4C3H39110.5°110.8°
C4C3H38111.2°110.8°
C3C4C5105.2°104.2°
C3C4H41111.8°110.4°
C3C4H40110.9°110.4°
H39C3H38107.1°110.9°
C5C4H41111.9°110.5°
C5C4H40110.9°110.5°
C4C5N6112.2°110.0°
C4C5H42112.4°110.0°
H41C4H40106.2°110.6°
N6C5H42104.9°110.0°
C5N6C7129.2°106.7°
C5N6H43103.4°106.7°
C7N6H43103.4°106.7°
N6C7N8120.8°109.5°
N6C7C9119.7°109.5°
N6C7H785.9°109.5°
N8C7C9119.2°109.5°
N8C7H789.8°109.5°
C7N8H44109.5°106.7°
C7N8H45109.5°106.7°
C9C7H799.9°109.4°
C7C9C12119.4°119.9°
C7C9C10122.1°119.9°
H44N8H45109.5°106.7°
C12C9C10118.4°120.2°
C9C12C13120.9°120.1°
C9C12H48119.5°119.9°
C9C10C11120.5°120.1°
C9C10H46119.7°120.0°
C13C12H48119.5°120.0°
C12C13C14120.9°119.9°
C12C13H49119.5°120.1°
C14C13H49119.6°120.0°
C13C14C11118.6°119.7°
C13C14C15119.7°120.1°
C11C10H46119.8°119.9°
C10C11C14120.5°119.9°
C10C11H47119.7°120.1°
C14C11H47119.7°120.0°
C11C14C15121.7°120.1°
C14C15C17127.9°126.7°
C14C15C16123.7°126.7°
C17C15C16108.4°106.7°
C15C17O18111.5°108.5°
C15C17H51124.3°125.8°
C15C16C19102.8°106.7°
C15C16H50128.6°126.6°
O18C17H51124.3°125.8°
C17O18C19102.3°109.7°
O18C19C16115.1°108.5°
O18C19C20123.1°125.7°
C19C16H50128.6°126.7°
C16C19C20121.8°125.8°
C19C20C23121.8°120.2°
C19C20C21119.9°120.2°
C23C20C21118.4°119.7°
C20C23C24120.6°119.9°
C20C23H54119.7°120.0°
C20C21C22120.9°119.9°
C20C21H52119.6°120.0°
C24C23H54119.7°120.1°
C23C24C25121.2°120.1°
C23C24H55119.4°119.9°
C25C24H55119.4°119.9°
C24C25C22118.1°120.3°
C24C25C26119.6°119.9°
C22C21H52119.6°120.1°
C21C22C25120.7°120.2°
C21C22H53119.6°119.9°
C25C22H53119.7°120.0°
C22C25C26122.3°119.8°
C25C26N27119.3°109.4°
C25C26N28120.8°109.5°
C25C26H2689.2°109.5°
N27C26N28119.5°109.5°
N27C26H2699.5°109.4°
C26N27H56109.5°106.7°
C26N27H57109.5°106.7°
N28C26H2687.7°109.5°
C26N28C29126.7°106.7°
C26N28H58104.1°106.7°
H56N27H57109.5°106.6°
C29N28H58104.1°106.7°
N28C29C30110.8°110.0°
N28C29C33110.7°110.0°
N28C29H59106.7°110.0°
C30C29C33106.1°106.6°
C30C29H59111.3°110.1°
C29C30C31105.3°106.6°
C29C30H60110.9°110.0°
C29C30H61111.8°110.0°
C33C29H59111.3°110.1°
C29C33C32106.7°104.2°
C29C33H67110.4°110.5°
C29C33H66111.0°110.4°
C31C30H60110.9°110.0°
C31C30H61111.8°110.0°
C30C31C32103.8°104.2°
C30C31H62112.6°110.5°
C30C31H63111.4°110.5°
H60C30H61106.3°110.0°
C32C31H62112.6°110.5°
C32C31H63111.4°110.5°
C31C32C33105.0°102.8°
C31C32H64112.0°110.7°
C31C32H65111.0°110.8°
H62C31H63105.2°110.5°
C33C32H64112.0°110.8°
C33C32H65111.0°110.8°
C32C33H67110.4°110.5°
C32C33H66111.0°110.5°
H64C32H65106.1°110.8°
H67C33H66107.3°110.6°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C2C1C5H34122.0°119.4°
C2C1C5H35120.0°119.3°
C2C1H34H35121.4°121.4°
C1C2C3H37120.0°118.6°
C1C2C3H36121.4°118.7°
C1C2H37H36121.5°122.6°
C1C2C3C46.9°37.9°
C1C2C3H39126.9°156.3°
C1C2C3H38114.2°80.4°
C2C1C5C439.2°0.0°
C2C1C5N6159.4°119.3°
C2C1C5H4282.7°119.3°
C5C1H34H35121.4°121.3°
C5C1C2C328.6°23.6°
C5C1C2H3791.4°95.0°
C5C1C2H36150.0°142.3°
C1C5C4C334.9°23.6°
C1C5C4N6119.3°119.4°
C1C5C4H42122.8°119.3°
C1C5C4H4186.8°95.1°
C1C5C4H40154.9°142.2°
C1C5N6H42123.1°121.4°
C1C5N6C7170.6°155.0°
C1C5N6H4369.4°41.2°
H34C1C2C3150.6°95.7°
H34C1C2H3730.6°145.6°
H34C1C2H3688.1°23.0°
H34C1C5C4161.2°119.3°
H34C1C5N678.6°121.4°
H34C1C5H4239.3°0.0°
H35C1C2C391.4°142.8°
H35C1C2H37148.6°24.2°
H35C1C2H3630.0°98.5°
H35C1C5C480.8°119.3°
H35C1C5N639.5°0.0°
H35C1C5H42157.3°121.4°
C3C2H37H36121.5°122.7°
C2C3C4H39120.0°118.3°
C2C3C4H38121.2°118.2°
C2C3H39H38121.2°123.2°
C2C3C4C517.3°37.9°
C2C3C4H41104.3°80.7°
C2C3C4H40137.3°156.6°
H37C2C3C4113.0°80.7°
H37C2C3H397.0°37.7°
H37C2C3H38125.8°161.0°
H36C2C3C4128.3°156.6°
H36C2C3H39111.7°85.1°
H36C2C3H387.2°38.3°
C4C3H39H38121.2°123.4°
C3C4C5H41121.6°118.6°
C3C4C5H40120.0°118.7°
C3C4H41H40121.1°122.6°
C3C4C5N6154.2°142.9°
C3C4C5H4288.0°95.7°
H39C3C4C5102.7°156.2°
H39C3C4H41135.7°37.5°
H39C3C4H4017.3°85.1°
H38C3C4C5138.5°80.3°
H38C3C4H4116.9°161.0°
H38C3C4H40101.5°38.4°
C5C4H41H40121.1°122.7°
C4C5N6H42122.3°121.4°
C4C5N6C774.7°87.8°
C4C5N6H4345.2°158.4°
H41C4C5N632.5°24.3°
H41C4C5H42150.4°145.6°
H40C4C5N685.8°98.4°
H40C4C5H4232.1°22.9°
C5N6C7H43120.0°113.8°
C5N6C7N80.1°105.0°
C5N6C7C9173.4°135.0°
C5N6C7H787.4°15.0°
H42C5N6C747.5°33.6°
H42C5N6H43167.5°80.3°
N6C7N8C9173.6°120.0°
N6C7N8H785.1°120.1°
N6C7C9H790.9°120.0°
N6C7N8H4491.1°60.0°
N6C7N8H45148.9°53.8°
N6C7C9C12163.2°30.0°
N6C7C9C1019.7°150.0°
H43N6C7N8119.9°8.8°
H43N6C7C966.6°111.2°
H43N6C7H732.5°128.8°
N8C7C9H795.4°120.0°
C7N8H44H45120.0°113.8°
N8C7C9C1223.1°150.0°
N8C7C9C10153.9°29.9°
C9C7N8H4482.5°60.0°
C9C7N8H4537.5°173.8°
C7C9C12C10177.1°179.9°
C7C9C12C13175.0°179.8°
C7C9C12H485.0°0.0°
C7C9C10C11173.7°179.9°
C7C9C10H466.4°0.1°
H7C7N8H44176.2°179.9°
H7C7N8H4563.8°66.3°
H7C7C9C1272.3°90.0°
H7C7C9C10110.7°90.0°
C9C12C13H48180.0°179.8°
C9C12C13C140.3°0.5°
C9C12C13H49179.7°180.0°
C12C9C10C113.4°0.1°
C12C9C10H46176.6°180.0°
C10C9C12C132.2°0.2°
C10C9C12H48177.8°179.9°
C9C10C11H46180.0°179.8°
C9C10C11C142.2°0.1°
C9C10C11H47177.8°179.9°
C12C13C14H49180.0°179.5°
C12C13C14C111.6°0.5°
C12C13C14C15177.6°179.8°
H48C12C13C14179.7°179.7°
H48C12C13H490.3°0.2°
C13C14C11C100.4°0.2°
C13C14C11C15179.2°179.7°
C13C14C11H47179.7°179.8°
C13C14C15C17172.4°140.3°
C13C14C15C165.4°40.0°
H49C13C14C11178.4°180.0°
H49C13C14C152.4°0.3°
C10C11C14H47180.0°180.0°
C10C11C14C15178.9°179.9°
H46C10C11C14177.8°179.9°
H46C10C11H472.2°0.1°
C11C14C15C176.8°40.0°
C11C14C15C16175.4°139.7°
H47C11C14C151.1°0.1°
C14C15C17C16178.0°179.8°
C14C15C17O18177.7°180.0°
C14C15C17H512.3°0.0°
C14C15C16C19177.7°179.8°
C14C15C16H502.3°0.3°
C15C17O18H51180.0°180.0°
C15C17O18C190.1°0.0°
C17C15C16C190.5°0.4°
C17C15C16H50179.5°180.0°
C16C15C17O180.3°0.2°
C16C15C17H51179.6°179.7°
C15C16C19O180.4°0.4°
C15C16C19H50180.0°179.6°
C15C16C19C20178.3°179.9°
C17O18C19C160.2°0.3°
C17O18C19C20178.1°180.0°
H51C17O18C19179.9°180.0°
O18C19C16C20177.9°179.7°
O18C19C16H50179.6°180.0°
O18C19C20C23174.6°40.0°
O18C19C20C214.0°140.1°
C16C19C20C233.2°140.3°
C16C19C20C21178.2°39.6°
H50C16C19C201.6°0.3°
C19C20C23C21178.6°180.0°
C19C20C23C24176.5°179.9°
C19C20C23H543.5°0.0°
C19C20C21C22176.7°179.8°
C19C20C21H523.3°0.0°
C20C23C24H54180.0°179.9°
C20C23C24C250.6°0.0°
C20C23C24H55179.4°180.0°
C23C20C21C221.9°0.3°
C23C20C21H52178.1°180.0°
C21C20C23C242.1°0.0°
C21C20C23H54177.9°179.9°
C20C21C22H52180.0°179.8°
C20C21C22C250.9°0.5°
C20C21C22H53179.1°180.0°
C23C24C25H55180.0°180.0°
C23C24C25C223.4°0.3°
C23C24C25C26175.4°179.9°
H54C23C24C25179.4°179.9°
H54C23C24H550.6°0.1°
C24C25C22C213.5°0.5°
C24C25C22C26178.7°179.7°
C24C25C22H53176.4°180.0°
C24C25C26N2722.0°30.0°
C24C25C26N28165.3°150.0°
C24C25C26H2678.5°89.9°
H55C24C25C22176.6°179.7°
H55C24C25C264.7°0.0°
C21C22C25H53180.0°179.4°
C21C22C25C26175.2°179.8°
H52C21C22C25179.1°179.7°
H52C21C22H530.9°0.2°
C22C25C26N27156.7°150.3°
C22C25C26N2816.0°30.3°
C22C25C26H26102.8°89.7°
H53C22C25C264.8°0.3°
C25C26N27N28172.8°120.0°
C25C26N27H2694.5°120.0°
C25C26N28H2687.7°120.1°
C25C26N27H56104.6°60.0°
C25C26N27H57135.4°173.7°
C25C26N28C29156.3°135.1°
C25C26N28H5883.7°111.2°
N27C26N28H2699.6°119.9°
C26N27H56H57120.0°113.7°
N27C26N28C2930.9°105.0°
N27C26N28H5889.0°8.8°
N28C26N27H5682.6°60.0°
N28C26N27H5737.4°53.7°
C26N28C29H58120.0°113.7°
C26N28C29C3065.0°155.0°
C26N28C29C33177.6°87.8°
C26N28C29H5956.3°33.6°
H26C26N27H5610.1°180.0°
H26C26N27H57130.1°66.3°
H26C26N28C2968.6°15.0°
H26C26N28H58171.4°128.7°
N28C29C30C33120.2°119.3°
N28C29C30H59118.5°121.4°
N28C29C33H59118.5°121.4°
N28C29C30C31141.5°119.3°
N28C29C30H6021.5°0.0°
N28C29C30H6196.9°121.5°
N28C29C33C32119.7°142.9°
N28C29C33H67120.3°98.4°
N28C29C33H661.4°24.2°
H58N28C29C30175.0°41.3°
H58N28C29C3357.7°158.5°
H58N28C29H5963.7°80.1°
C30C29C33H59121.2°119.4°
C29C30C31H60120.0°119.3°
C29C30C31H61121.5°119.3°
C29C30H60H61121.7°121.4°
C29C30C31C3235.0°23.6°
C29C30C31H6287.1°142.3°
C29C30C31H63154.9°95.1°
C30C29C33C320.5°23.6°
C30C29C33H67119.5°142.3°
C30C29C33H66121.6°95.1°
C33C29C30C3121.3°0.0°
C33C29C30H6098.7°119.3°
C33C29C30H61142.9°119.3°
C29C33C32C3122.1°37.9°
C29C33C32H67120.0°118.7°
C29C33C32H66121.1°118.6°
C29C33C32H64143.8°80.4°
C29C33C32H6597.9°156.3°
C29C33H67H66121.1°122.6°
H59C29C30C31100.0°119.4°
H59C29C30H60140.0°121.3°
H59C29C30H6121.6°0.1°
H59C29C33C32121.8°95.8°
H59C29C33H671.8°22.9°
H59C29C33H66117.1°145.6°
C31C30H60H61121.7°121.4°
C30C31C32H62122.1°118.7°
C30C31C32H63120.0°118.7°
C30C31H62H63121.5°122.6°
C30C31C32C3335.2°37.9°
C30C31C32H64156.9°80.4°
C30C31C32H6584.8°156.3°
H60C30C31C3285.0°142.9°
H60C30C31H62152.9°98.4°
H60C30C31H6334.9°24.2°
H61C30C31C32156.5°95.7°
H61C30C31H6234.4°23.0°
H61C30C31H6383.5°145.6°
C32C31H62H63121.5°122.6°
C31C32C33H64121.7°118.3°
C31C32C33H65120.0°118.4°
C31C32H64H65121.2°123.4°
C31C32C33H6797.9°156.6°
C31C32C33H66143.2°80.7°
H62C31C32C3386.9°156.6°
H62C31C32H6434.8°38.3°
H62C31C32H65153.1°85.0°
H63C31C32C33155.2°80.8°
H63C31C32H6483.1°160.9°
H63C31C32H6535.2°37.5°
C33C32H64H65121.2°123.3°
C32C33H67H66121.2°122.6°
H64C32C33H6723.8°38.3°
H64C32C33H6695.1°161.0°
H65C32C33H67142.1°85.0°
H65C32C33H6623.2°37.6°

223532

PDB entries from 2024-08-07

PDB statisticsPDBj update infoContact PDBjnumon