18M

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
OP2	P	doub	1.48Å	1.51Å
O5'	P	sing	1.61Å	1.61Å
P	OP3	sing	1.61Å	1.60Å
P	OP1	sing	1.61Å	1.51Å
O5'	C5'	sing	1.43Å	1.42Å
C4'	C5'	sing	1.53Å	1.52Å
C5'	H5'	sing	1.09Å	1.10Å
C5'	H5'A	sing	1.09Å	1.10Å
C3'	C4'	sing	1.55Å	1.52Å
O4'	C4'	sing	1.44Å	1.43Å
C4'	H4'	sing	1.09Å	1.10Å
C1'	O4'	sing	1.44Å	1.43Å
C2'	C3'	sing	1.55Å	1.52Å
C3'	O3'	sing	1.43Å	1.44Å
C3'	H3'	sing	1.09Å	1.10Å
O3'	P1	sing	1.61Å	1.60Å
O2'	C2'	sing	1.43Å	1.45Å
C2'	C1'	sing	1.55Å	1.53Å
C2'	H2'	sing	1.09Å	1.10Å
O2'	CM2	sing	1.43Å	1.44Å
N9	C1'	sing	1.47Å	1.49Å
C1'	H1'	sing	1.09Å	1.10Å
C8	N9	sing	1.36Å	1.35Å	Aromatic
C4	N9	sing	1.36Å	1.33Å	Aromatic
N7	C8	doub	1.30Å	1.36Å	Aromatic
C8	H8	sing	1.08Å	1.08Å
N7	C5	sing	1.35Å	1.34Å	Aromatic
C6	C5	sing	1.47Å	1.48Å
C5	C4	doub	1.39Å	1.47Å	Aromatic
O6	C6	doub	1.22Å	1.26Å
C6	N1	sing	1.34Å	1.34Å
N1	C2	doub	1.32Å	1.34Å
C2	N3	sing	1.36Å	1.36Å
C2	N2	sing	1.37Å	1.36Å
N2	HN2	sing	0.97Å	1.00Å
N2	HN2A	sing	0.97Å	1.00Å
C4	N3	sing	1.37Å	1.35Å
N3	HN3	sing	0.97Å	1.00Å
O12	P1	doub	1.48Å	1.60Å
P1	O13	sing	1.61Å	1.49Å
P1	O11	sing	1.61Å	1.49Å
O11	HO11	sing	0.97Å	0.95Å
O13	HO13	sing	0.97Å	0.95Å
CM2	HM2	sing	1.09Å	1.10Å
CM2	HM2A	sing	1.09Å	1.10Å
CM2	HM2B	sing	1.09Å	1.10Å
OP1	HOP1	sing	0.97Å	0.95Å
OP3	HOP3	sing	0.97Å	0.95Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
OP2	P	O5'	110.1°	109.5°
OP2	P	OP3	108.0°	109.5°
OP2	P	OP1	119.4°	109.5°
O5'	P	OP3	101.7°	109.5°
O5'	P	OP1	108.3°	109.5°
P	O5'	C5'	119.8°	123.0°
OP3	P	OP1	107.8°	109.4°
P	OP3	HOP3	109.5°	114.0°
P	OP1	HOP1	109.5°	114.0°
O5'	C5'	C4'	109.9°	109.5°
O5'	C5'	H5'	109.4°	109.5°
O5'	C5'	H5'A	109.4°	109.5°
C4'	C5'	H5'	109.3°	109.5°
C4'	C5'	H5'A	109.4°	109.4°
C5'	C4'	C3'	113.6°	110.6°
C5'	C4'	O4'	110.8°	110.6°
C5'	C4'	H4'	108.2°	110.6°
H5'	C5'	H5'A	109.4°	109.5°
C3'	C4'	O4'	106.6°	103.6°
C3'	C4'	H4'	108.1°	110.6°
C4'	C3'	C2'	104.7°	102.1°
C4'	C3'	O3'	108.0°	110.9°
C4'	C3'	H3'	111.6°	110.9°
O4'	C4'	H4'	109.4°	110.6°
C4'	O4'	C1'	108.5°	107.0°
O4'	C1'	C2'	103.9°	107.3°
O4'	C1'	N9	110.6°	109.9°
O4'	C1'	H1'	109.3°	109.9°
C2'	C3'	O3'	107.5°	110.9°
C2'	C3'	H3'	111.6°	110.9°
C3'	C2'	O2'	111.8°	110.5°
C3'	C2'	C1'	101.2°	104.2°
C3'	C2'	H2'	108.6°	110.5°
O3'	C3'	H3'	112.9°	110.9°
C3'	O3'	P1	124.4°	122.9°
O3'	P1	O12	101.2°	109.5°
O3'	P1	O13	108.8°	109.4°
O3'	P1	O11	107.4°	109.5°
O2'	C2'	C1'	116.6°	110.4°
O2'	C2'	H2'	109.6°	110.6°
C2'	O2'	CM2	119.8°	114.0°
C1'	C2'	H2'	108.5°	110.5°
C2'	C1'	N9	116.2°	109.9°
C2'	C1'	H1'	108.1°	109.8°
O2'	CM2	HM2	109.5°	109.5°
O2'	CM2	HM2A	109.5°	109.5°
O2'	CM2	HM2B	109.5°	109.5°
N9	C1'	H1'	108.6°	110.0°
C1'	N9	C8	127.1°	126.2°
C1'	N9	C4	124.3°	126.3°
C8	N9	C4	108.6°	107.5°
N9	C8	N7	110.8°	109.5°
N9	C8	H8	124.6°	125.2°
N9	C4	C5	106.2°	106.4°
N9	C4	N3	134.8°	134.7°
N7	C8	H8	124.6°	125.2°
C8	N7	C5	107.6°	109.1°
N7	C5	C6	136.0°	134.5°
N7	C5	C4	106.8°	107.4°
C6	C5	C4	117.2°	118.1°
C5	C6	O6	122.1°	120.7°
C5	C6	N1	117.6°	118.5°
C5	C4	N3	119.1°	118.9°
O6	C6	N1	120.3°	120.7°
C6	N1	C2	122.9°	121.4°
N1	C2	N3	122.5°	122.5°
N1	C2	N2	116.9°	118.7°
N3	C2	N2	120.6°	118.8°
C2	N3	C4	120.7°	120.6°
C2	N3	HN3	119.6°	119.7°
C2	N2	HN2	120.0°	120.1°
C2	N2	HN2A	120.0°	120.0°
HN2	N2	HN2A	120.0°	119.9°
C4	N3	HN3	119.7°	119.8°
O12	P1	O13	109.7°	109.4°
O12	P1	O11	108.5°	109.5°
O13	P1	O11	119.6°	109.5°
P1	O13	HO13	109.5°	114.0°
P1	O11	HO11	109.5°	114.0°
HM2	CM2	HM2A	109.4°	109.5°
HM2	CM2	HM2B	109.5°	109.5°
HM2A	CM2	HM2B	109.5°	109.4°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
OP2	P	O5'	OP3	114.4°	120.0°
OP2	P	O5'	OP1	132.2°	120.0°
OP2	P	OP3	OP1	130.4°	120.0°
OP2	P	O5'	C5'	161.3°	55.1°
OP2	P	OP1	HOP1	0.0°	60.0°
OP2	P	OP3	HOP3	0.0°	180.0°
O5'	P	OP3	OP1	113.7°	120.0°
P	O5'	C5'	C4'	170.9°	180.0°
P	O5'	C5'	H5'	69.0°	60.0°
P	O5'	C5'	H5'A	50.8°	60.1°
O5'	P	OP1	HOP1	127.0°	180.0°
O5'	P	OP3	HOP3	115.9°	60.0°
OP3	P	O5'	C5'	84.3°	65.0°
OP3	P	OP1	HOP1	123.7°	60.0°
OP1	P	O5'	C5'	29.0°	175.0°
OP1	P	OP3	HOP3	130.4°	60.0°
O5'	C5'	C4'	H5'	120.1°	120.0°
O5'	C5'	C4'	H5'A	120.1°	119.9°
O5'	C5'	H5'	H5'A	119.8°	120.0°
O5'	C5'	C4'	C3'	65.9°	177.1°
O5'	C5'	C4'	O4'	54.1°	68.6°
O5'	C5'	C4'	H4'	174.1°	54.3°
C4'	C5'	H5'	H5'A	119.8°	120.0°
C5'	C4'	C3'	O4'	122.4°	118.6°
C5'	C4'	C3'	H4'	120.1°	122.8°
C5'	C4'	O4'	H4'	119.2°	122.9°
C5'	C4'	O4'	C1'	140.5°	158.6°
C5'	C4'	C3'	C2'	113.6°	155.5°
C5'	C4'	C3'	O3'	132.0°	86.3°
C5'	C4'	C3'	H3'	7.3°	37.3°
H5'	C5'	C4'	C3'	54.2°	62.8°
H5'	C5'	C4'	O4'	174.2°	51.4°
H5'	C5'	C4'	H4'	65.9°	174.3°
H5'A	C5'	C4'	C3'	174.0°	57.2°
H5'A	C5'	C4'	O4'	66.0°	171.4°
H5'A	C5'	C4'	H4'	54.0°	65.7°
C3'	C4'	O4'	H4'	116.7°	118.6°
C3'	C4'	O4'	C1'	16.5°	40.0°
C4'	C3'	C2'	O3'	114.7°	118.2°
C4'	C3'	C2'	H3'	120.9°	118.2°
C4'	C3'	O3'	H3'	123.9°	123.7°
C4'	C3'	O3'	P1	89.7°	121.5°
C4'	C3'	C2'	O2'	153.1°	97.8°
C4'	C3'	C2'	C1'	28.3°	20.8°
C4'	C3'	C2'	H2'	85.9°	139.5°
O4'	C4'	C3'	C2'	8.7°	36.9°
O4'	C4'	C3'	O3'	105.7°	155.1°
O4'	C4'	C3'	H3'	129.6°	81.3°
C4'	O4'	C1'	C2'	35.0°	26.4°
C4'	O4'	C1'	N9	160.2°	145.8°
C4'	O4'	C1'	H1'	80.2°	93.0°
H4'	C4'	O4'	C1'	100.2°	78.6°
H4'	C4'	C3'	C2'	126.3°	81.6°
H4'	C4'	C3'	O3'	11.9°	36.5°
H4'	C4'	C3'	H3'	112.8°	160.2°
O4'	C1'	C2'	C3'	38.5°	2.0°
O4'	C1'	C2'	O2'	160.0°	120.7°
O4'	C1'	C2'	N9	121.6°	119.4°
O4'	C1'	C2'	H1'	116.1°	119.4°
O4'	C1'	C2'	H2'	75.7°	116.7°
O4'	C1'	N9	H1'	120.0°	121.2°
O4'	C1'	N9	C8	74.7°	22.8°
O4'	C1'	N9	C4	103.6°	157.5°
C2'	C3'	O3'	H3'	123.6°	123.7°
C2'	C3'	O3'	P1	157.8°	125.8°
C3'	C2'	O2'	C1'	115.7°	114.7°
C3'	C2'	O2'	H2'	120.5°	122.6°
C3'	C2'	C1'	H2'	114.2°	118.7°
C3'	C2'	O2'	CM2	90.3°	150.0°
C3'	C2'	C1'	N9	160.1°	121.5°
C3'	C2'	C1'	H1'	77.6°	117.4°
O3'	C3'	C2'	O2'	38.3°	20.4°
O3'	C3'	C2'	C1'	86.5°	139.0°
O3'	C3'	C2'	H2'	159.4°	102.3°
C3'	O3'	P1	O12	132.5°	55.1°
C3'	O3'	P1	O13	17.0°	175.0°
C3'	O3'	P1	O11	113.8°	65.0°
H3'	C3'	O3'	P1	34.2°	2.2°
H3'	C3'	C2'	O2'	86.1°	144.0°
H3'	C3'	C2'	C1'	149.1°	97.4°
H3'	C3'	C2'	H2'	35.0°	21.3°
O3'	P1	O12	O13	114.8°	119.9°
O3'	P1	O12	O11	112.9°	120.1°
O3'	P1	O13	O11	123.9°	120.0°
O3'	P1	O11	HO11	108.7°	60.0°
O3'	P1	O13	HO13	109.9°	180.0°
O2'	C2'	C1'	H2'	124.3°	122.7°
O2'	C2'	C1'	N9	78.4°	119.9°
O2'	C2'	C1'	H1'	43.9°	1.2°
C2'	O2'	CM2	HM2	180.0°	180.0°
C2'	O2'	CM2	HM2A	60.0°	60.0°
C2'	O2'	CM2	HM2B	60.0°	60.0°
C1'	C2'	O2'	CM2	25.4°	95.3°
C2'	C1'	N9	H1'	122.0°	121.0°
C2'	C1'	N9	C8	43.3°	95.0°
C2'	C1'	N9	C4	138.4°	84.7°
H2'	C2'	O2'	CM2	149.2°	27.4°
H2'	C2'	C1'	N9	46.0°	2.8°
H2'	C2'	C1'	H1'	168.2°	123.9°
O2'	CM2	HM2	HM2A	120.0°	120.0°
O2'	CM2	HM2	HM2B	120.0°	120.0°
O2'	CM2	HM2A	HM2B	120.0°	120.0°
C1'	N9	C8	C4	178.5°	179.8°
C1'	N9	C8	N7	179.3°	180.0°
C1'	N9	C8	H8	0.7°	0.0°
C1'	N9	C4	C5	179.2°	179.9°
C1'	N9	C4	N3	1.0°	0.7°
H1'	C1'	N9	C8	165.3°	144.0°
H1'	C1'	N9	C4	16.4°	36.3°
N9	C8	N7	H8	180.0°	180.0°
N9	C8	N7	C5	0.6°	0.0°
C8	N9	C4	C5	0.6°	0.4°
C8	N9	C4	N3	179.5°	179.6°
C4	N9	C8	N7	0.8°	0.2°
C4	N9	C8	H8	179.2°	179.8°
N9	C4	C5	N7	0.3°	0.4°
N9	C4	C5	C6	179.9°	179.9°
N9	C4	C5	N3	179.9°	179.3°
N9	C4	N3	C2	179.6°	179.6°
N9	C4	N3	HN3	0.4°	0.6°
C8	N7	C5	C6	179.6°	180.0°
C8	N7	C5	C4	0.2°	0.3°
H8	C8	N7	C5	179.4°	180.0°
N7	C5	C6	C4	179.8°	179.7°
N7	C5	C6	O6	0.0°	0.1°
N7	C5	C6	N1	179.7°	180.0°
N7	C5	C4	N3	179.9°	179.7°
C5	C6	O6	N1	179.7°	179.9°
C5	C6	N1	C2	0.7°	0.1°
C6	C5	C4	N3	0.0°	0.5°
C4	C5	C6	O6	179.8°	179.8°
C4	C5	C6	N1	0.4°	0.3°
C5	C4	N3	C2	0.2°	0.5°
C5	C4	N3	HN3	179.8°	179.7°
O6	C6	N1	C2	179.5°	180.0°
C6	N1	C2	N3	0.5°	0.0°
C6	N1	C2	N2	179.6°	180.0°
N1	C2	N3	N2	179.9°	180.0°
N1	C2	N2	HN2	0.0°	0.0°
N1	C2	N2	HN2A	180.0°	180.0°
N1	C2	N3	C4	0.0°	0.2°
N1	C2	N3	HN3	180.0°	180.0°
N3	C2	N2	HN2	179.9°	180.0°
N3	C2	N2	HN2A	0.1°	0.0°
C2	N3	C4	HN3	180.0°	179.8°
C2	N2	HN2	HN2A	180.0°	180.0°
N2	C2	N3	C4	179.9°	179.8°
N2	C2	N3	HN3	0.1°	0.0°
O12	P1	O13	O11	126.2°	120.0°
O12	P1	O11	HO11	0.0°	180.0°
O12	P1	O13	HO13	0.0°	60.0°
O13	P1	O11	HO11	126.8°	60.0°
O11	P1	O13	HO13	126.2°	60.0°
HM2	CM2	HM2A	HM2B	120.0°	120.0°

Release date:	2012-11-16
Definition date:	2012-11-07
Last modified:	2012-11-16
Release status:	REL
Processing site:	RCSB
Derived from:	4HQU