145
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
C1 | C2 | sing | 1.53Å | 1.51Å | |
C1 | O5 | sing | 1.43Å | 1.41Å | |
C1 | O1 | sing | 1.43Å | 1.43Å | |
C1 | H1 | sing | 1.09Å | 1.11Å | |
C2 | O2 | sing | 1.43Å | 1.43Å | |
C2 | C3 | sing | 1.53Å | 1.52Å | |
C2 | H2 | sing | 1.09Å | 1.11Å | |
O2 | HO2 | sing | 0.97Å | 0.95Å | |
C3 | O3 | sing | 1.43Å | 1.48Å | |
C3 | C4 | sing | 1.53Å | 1.53Å | |
C3 | H3 | sing | 1.09Å | 1.12Å | |
O3 | HO3 | sing | 0.97Å | 0.95Å | |
C4 | O4 | sing | 1.43Å | 1.46Å | |
C4 | C5 | sing | 1.53Å | 1.54Å | |
C4 | H4 | sing | 1.09Å | 1.12Å | |
O4 | HO4 | sing | 0.97Å | 0.95Å | |
C5 | C6 | sing | 1.53Å | 1.51Å | |
C5 | O5 | sing | 1.43Å | 1.45Å | |
C5 | H5 | sing | 1.09Å | 1.12Å | |
C6 | O6 | sing | 1.43Å | 1.43Å | |
C6 | H61 | sing | 1.09Å | 1.11Å | |
C6 | H62 | sing | 1.09Å | 1.11Å | |
O6 | HO6 | sing | 0.97Å | 0.95Å | |
O1 | C1' | sing | 1.36Å | 1.38Å | |
C1' | C2' | doub | 1.39Å | 1.42Å | Aromatic |
C1' | C6' | sing | 1.39Å | 1.39Å | Aromatic |
C2' | C3' | sing | 1.38Å | 1.41Å | Aromatic |
C2' | N1' | sing | 1.48Å | 1.48Å | |
C3' | C4' | doub | 1.38Å | 1.35Å | Aromatic |
C3' | H3' | sing | 1.08Å | 1.10Å | |
C4' | C5' | sing | 1.38Å | 1.39Å | Aromatic |
C4' | H4' | sing | 1.08Å | 1.10Å | |
C5' | C6' | doub | 1.38Å | 1.41Å | Aromatic |
C5' | H5' | sing | 1.08Å | 1.10Å | |
C6' | H6' | sing | 1.08Å | 1.10Å | |
N1' | O2' | sing | 1.22Å | 1.20Å | |
N1' | O3' | doub | 1.22Å | 1.26Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
C2 | C1 | O5 | 107.5° | 109.8° |
C2 | C1 | O1 | 104.7° | 109.4° |
C2 | C1 | H1 | 112.3° | 109.4° |
C1 | C2 | O2 | 106.2° | 109.6° |
C1 | C2 | C3 | 112.3° | 109.0° |
C1 | C2 | H2 | 110.6° | 109.5° |
O5 | C1 | O1 | 104.8° | 109.5° |
O5 | C1 | H1 | 112.3° | 109.4° |
C1 | O5 | C5 | 111.5° | 107.6° |
O1 | C1 | H1 | 114.7° | 109.4° |
C1 | O1 | C1' | 122.3° | 106.8° |
O2 | C2 | C3 | 111.6° | 109.6° |
O2 | C2 | H2 | 111.3° | 109.5° |
C2 | O2 | HO2 | 106.2° | 106.8° |
C3 | C2 | H2 | 105.1° | 109.5° |
C2 | C3 | O3 | 109.9° | 109.6° |
C2 | C3 | C4 | 111.3° | 108.6° |
C2 | C3 | H3 | 108.9° | 109.6° |
O3 | C3 | C4 | 112.3° | 109.7° |
O3 | C3 | H3 | 107.8° | 109.6° |
C3 | O3 | HO3 | 110.0° | 106.8° |
C4 | C3 | H3 | 106.4° | 109.6° |
C3 | C4 | O4 | 110.1° | 109.6° |
C3 | C4 | C5 | 107.0° | 109.0° |
C3 | C4 | H4 | 112.5° | 109.6° |
O4 | C4 | C5 | 114.3° | 109.7° |
O4 | C4 | H4 | 104.9° | 109.5° |
C4 | O4 | HO4 | 110.1° | 106.8° |
C5 | C4 | H4 | 108.1° | 109.5° |
C4 | C5 | C6 | 114.0° | 109.4° |
C4 | C5 | O5 | 108.0° | 109.8° |
C4 | C5 | H5 | 106.1° | 109.4° |
C6 | C5 | O5 | 105.0° | 109.4° |
C6 | C5 | H5 | 109.1° | 109.4° |
C5 | C6 | O6 | 110.8° | 109.5° |
C5 | C6 | H61 | 111.7° | 109.5° |
C5 | C6 | H62 | 111.7° | 109.4° |
O5 | C5 | H5 | 114.9° | 109.4° |
O6 | C6 | H61 | 111.7° | 109.5° |
O6 | C6 | H62 | 111.7° | 109.5° |
C6 | O6 | HO6 | 110.8° | 106.8° |
H61 | C6 | H62 | 98.7° | 109.5° |
O1 | C1' | C2' | 120.4° | 120.1° |
O1 | C1' | C6' | 123.2° | 120.0° |
C2' | C1' | C6' | 116.4° | 119.9° |
C1' | C2' | C3' | 121.2° | 120.0° |
C1' | C2' | N1' | 123.4° | 120.0° |
C1' | C6' | C5' | 120.5° | 120.0° |
C1' | C6' | H6' | 118.9° | 120.1° |
C3' | C2' | N1' | 115.4° | 120.0° |
C2' | C3' | C4' | 122.1° | 120.1° |
C2' | C3' | H3' | 121.0° | 120.0° |
C2' | N1' | O2' | 121.4° | 120.0° |
C2' | N1' | O3' | 119.7° | 120.0° |
C4' | C3' | H3' | 116.9° | 119.9° |
C3' | C4' | C5' | 117.3° | 120.1° |
C3' | C4' | H4' | 120.1° | 120.0° |
C5' | C4' | H4' | 122.7° | 119.9° |
C4' | C5' | C6' | 122.5° | 120.0° |
C4' | C5' | H5' | 118.0° | 120.0° |
C6' | C5' | H5' | 119.5° | 120.0° |
C5' | C6' | H6' | 120.6° | 120.0° |
O2' | N1' | O3' | 118.9° | 120.0° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
C2 | C1 | O5 | O1 | 111.0° | 120.1° |
C2 | C1 | O5 | H1 | 123.9° | 120.1° |
C2 | C1 | O1 | H1 | 123.5° | 119.8° |
C1 | C2 | O2 | C3 | 122.6° | 119.6° |
C1 | C2 | O2 | H2 | 120.4° | 120.1° |
C1 | C2 | C3 | H2 | 120.2° | 119.8° |
C1 | C2 | O2 | HO2 | 180.0° | 60.0° |
C1 | C2 | C3 | O3 | 176.3° | 173.6° |
C1 | C2 | C3 | C4 | 51.2° | 53.7° |
C1 | C2 | C3 | H3 | 65.8° | 66.1° |
C2 | C1 | O5 | C5 | 65.9° | 67.5° |
C2 | C1 | O1 | C1' | 173.1° | 174.7° |
O5 | C1 | O1 | H1 | 123.5° | 119.8° |
O5 | C1 | C2 | O2 | 177.8° | 178.8° |
O5 | C1 | C2 | C3 | 55.7° | 61.2° |
O5 | C1 | C2 | H2 | 61.3° | 58.7° |
C1 | O5 | C5 | C4 | 70.2° | 67.6° |
C1 | O5 | C5 | C6 | 167.9° | 172.3° |
C1 | O5 | C5 | H5 | 48.0° | 52.5° |
O5 | C1 | O1 | C1' | 60.1° | 64.9° |
O1 | C1 | C2 | O2 | 71.1° | 58.7° |
O1 | C1 | C2 | C3 | 166.7° | 178.7° |
O1 | C1 | C2 | H2 | 49.7° | 61.5° |
O1 | C1 | O5 | C5 | 176.9° | 172.3° |
C1 | O1 | C1' | C2' | 173.8° | 179.7° |
C1 | O1 | C1' | C6' | 5.5° | 0.1° |
H1 | C1 | C2 | O2 | 53.9° | 61.1° |
H1 | C1 | C2 | C3 | 68.2° | 58.9° |
H1 | C1 | C2 | H2 | 174.8° | 178.7° |
H1 | C1 | O5 | C5 | 58.0° | 52.5° |
H1 | C1 | O1 | C1' | 63.4° | 54.9° |
O2 | C2 | C3 | H2 | 120.7° | 120.2° |
O2 | C2 | C3 | O3 | 64.6° | 66.5° |
O2 | C2 | C3 | C4 | 170.3° | 173.7° |
O2 | C2 | C3 | H3 | 53.3° | 53.9° |
C3 | C2 | O2 | HO2 | 57.4° | 179.6° |
C2 | C3 | O3 | C4 | 124.5° | 119.2° |
C2 | C3 | O3 | H3 | 118.6° | 120.4° |
C2 | C3 | C4 | H3 | 118.5° | 119.8° |
C2 | C3 | O3 | HO3 | 180.0° | 60.0° |
C2 | C3 | C4 | O4 | 72.7° | 66.3° |
C2 | C3 | C4 | C5 | 52.0° | 53.8° |
C2 | C3 | C4 | H4 | 170.6° | 173.6° |
H2 | C2 | O2 | HO2 | 59.6° | 60.2° |
H2 | C2 | C3 | O3 | 56.0° | 53.8° |
H2 | C2 | C3 | C4 | 69.0° | 66.1° |
H2 | C2 | C3 | H3 | 174.0° | 174.1° |
O3 | C3 | C4 | H3 | 117.7° | 120.4° |
O3 | C3 | C4 | O4 | 51.0° | 53.5° |
O3 | C3 | C4 | C5 | 175.8° | 173.6° |
O3 | C3 | C4 | H4 | 65.6° | 66.6° |
C4 | C3 | O3 | HO3 | 55.5° | 179.2° |
C3 | C4 | O4 | C5 | 120.4° | 119.6° |
C3 | C4 | O4 | H4 | 121.3° | 120.2° |
C3 | C4 | C5 | H4 | 121.4° | 119.8° |
C3 | C4 | O4 | HO4 | 180.0° | 60.0° |
C3 | C4 | C5 | C6 | 176.1° | 178.6° |
C3 | C4 | C5 | O5 | 59.9° | 61.4° |
C3 | C4 | C5 | H5 | 63.8° | 58.7° |
H3 | C3 | O3 | HO3 | 61.4° | 60.4° |
H3 | C3 | C4 | O4 | 168.8° | 174.0° |
H3 | C3 | C4 | C5 | 66.5° | 66.0° |
H3 | C3 | C4 | H4 | 52.1° | 53.8° |
O4 | C4 | C5 | H4 | 116.4° | 120.2° |
O4 | C4 | C5 | C6 | 54.0° | 61.5° |
O4 | C4 | C5 | O5 | 62.3° | 58.6° |
O4 | C4 | C5 | H5 | 174.1° | 178.7° |
C5 | C4 | O4 | HO4 | 59.6° | 179.6° |
C4 | C5 | C6 | O5 | 118.0° | 120.3° |
C4 | C5 | C6 | H5 | 118.4° | 119.9° |
C4 | C5 | O5 | H5 | 118.2° | 120.1° |
C4 | C5 | C6 | O6 | 60.3° | 174.9° |
C4 | C5 | C6 | H61 | 64.9° | 65.1° |
C4 | C5 | C6 | H62 | 174.4° | 54.9° |
H4 | C4 | O4 | HO4 | 58.7° | 60.2° |
H4 | C4 | C5 | C6 | 62.4° | 58.7° |
H4 | C4 | C5 | O5 | 178.7° | 178.8° |
H4 | C4 | C5 | H5 | 57.6° | 61.1° |
C6 | C5 | O5 | H5 | 119.9° | 119.9° |
C5 | C6 | O6 | H61 | 125.2° | 120.0° |
C5 | C6 | O6 | H62 | 125.2° | 120.0° |
C5 | C6 | H61 | H62 | 117.6° | 120.0° |
C5 | C6 | O6 | HO6 | 180.0° | 180.0° |
O5 | C5 | C6 | O6 | 178.3° | 64.8° |
O5 | C5 | C6 | H61 | 53.1° | 55.2° |
O5 | C5 | C6 | H62 | 56.4° | 175.2° |
H5 | C5 | C6 | O6 | 58.0° | 55.0° |
H5 | C5 | C6 | H61 | 176.7° | 175.0° |
H5 | C5 | C6 | H62 | 67.2° | 65.0° |
O6 | C6 | H61 | H62 | 117.6° | 120.0° |
H61 | C6 | O6 | HO6 | 54.7° | 60.0° |
H62 | C6 | O6 | HO6 | 54.8° | 60.0° |
O1 | C1' | C2' | C6' | 179.3° | 179.8° |
O1 | C1' | C2' | C3' | 179.5° | 179.7° |
O1 | C1' | C2' | N1' | 0.7° | 0.3° |
O1 | C1' | C6' | C5' | 179.4° | 180.0° |
O1 | C1' | C6' | H6' | 0.6° | 0.0° |
C1' | C2' | C3' | N1' | 178.9° | 179.4° |
C1' | C2' | C3' | C4' | 1.1° | 0.5° |
C1' | C2' | C3' | H3' | 179.0° | 179.7° |
C2' | C1' | C6' | C5' | 1.3° | 0.2° |
C2' | C1' | C6' | H6' | 178.7° | 179.7° |
C1' | C2' | N1' | O2' | 1.7° | 179.5° |
C1' | C2' | N1' | O3' | 178.6° | 0.6° |
C6' | C1' | C2' | C3' | 1.2° | 0.5° |
C6' | C1' | C2' | N1' | 179.9° | 180.0° |
C1' | C6' | C5' | C4' | 0.7° | 0.0° |
C1' | C6' | C5' | H6' | 180.0° | 180.0° |
C1' | C6' | C5' | H5' | 179.4° | 180.0° |
C2' | C3' | C4' | H3' | 180.0° | 179.7° |
C2' | C3' | C4' | C5' | 3.0° | 0.3° |
C2' | C3' | C4' | H4' | 177.0° | 179.7° |
C3' | C2' | N1' | O2' | 177.1° | 0.0° |
C3' | C2' | N1' | O3' | 2.5° | 180.0° |
N1' | C2' | C3' | C4' | 177.8° | 180.0° |
N1' | C2' | C3' | H3' | 2.1° | 0.3° |
C2' | N1' | O2' | O3' | 179.6° | 180.0° |
C3' | C4' | C5' | H4' | 180.0° | 180.0° |
C3' | C4' | C5' | C6' | 2.8° | 0.0° |
C3' | C4' | C5' | H5' | 177.2° | 180.0° |
H3' | C3' | C4' | C5' | 177.0° | 180.0° |
H3' | C3' | C4' | H4' | 3.0° | 0.0° |
C4' | C5' | C6' | H5' | 180.0° | 180.0° |
C4' | C5' | C6' | H6' | 179.3° | 180.0° |
H4' | C4' | C5' | C6' | 177.1° | 180.0° |
H4' | C4' | C5' | H5' | 2.8° | 0.0° |
H5' | C5' | C6' | H6' | 0.7° | 0.0° |