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12V

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C1BN1sing1.46Å1.48Å
C2N1sing1.35Å1.35Å
N1C6sing1.37Å1.40Å
O2C2doub1.22Å1.23Å
C2N3sing1.35Å1.39Å
N3C4sing1.35Å1.37Å
C4O4doub1.22Å1.22Å
C4C5sing1.42Å1.39Å
C6C5doub1.35Å1.39Å
C5H5sing1.08Å1.08Å
C6H6sing1.08Å1.08Å
O5BPAsing1.61Å1.63Å
O1APAdoub1.48Å1.47Å
PAO3Asing1.61Å1.64Å
PAO2Asing1.61Å1.49Å
O3APBsing1.61Å1.61Å
O1'PBsing1.61Å1.56Å
PBO1Bdoub1.48Å1.47Å
PBO2Bsing1.61Å1.47Å
S5'C1'sing1.82Å1.77Å
C1'C2'sing1.53Å1.52Å
C1'O1'sing1.43Å1.45Å
C1'H1'sing1.09Å1.10Å
C1BO4Bsing1.44Å1.45Å
C1BC2Bsing1.54Å1.49Å
C1BH1Bsing1.09Å1.10Å
C3'C2'sing1.52Å1.54Å
C2'N2'sing1.46Å1.46Å
C2'H2'sing1.09Å1.10Å
N2'C7'sing1.35Å1.32Å
N2'HN2'sing0.97Å1.00Å
O2'C2Bsing1.43Å1.44Å
O2'HO2'sing0.97Å0.95Å
O2AHO2Asing0.97Å0.95Å
C3BC2Bsing1.55Å1.54Å
C2BH2Bsing1.09Å1.10Å
O2BHO2Bsing0.97Å0.95Å
C4'C3'sing1.53Å1.53Å
C3'O3'sing1.43Å1.45Å
C3'H3'sing1.09Å1.10Å
O3'HO3'sing0.97Å0.95Å
O3BC3Bsing1.43Å1.47Å
C3BC4Bsing1.55Å1.52Å
C3BH3Bsing1.09Å1.10Å
O3BHO3Bsing0.97Å0.95Å
C5'C4'sing1.53Å1.51Å
O4'C4'sing1.43Å1.42Å
C4'H4'sing1.09Å1.10Å
O4'HO4'sing0.97Å0.95Å
C4BO4Bsing1.44Å1.44Å
C4BC5Bsing1.53Å1.53Å
C4BH4Bsing1.09Å1.10Å
C6'C5'sing1.53Å1.52Å
C5'S5'sing1.82Å1.77Å
C5'H5'sing1.09Å1.10Å
O5BC5Bsing1.43Å1.45Å
C5BH5Bsing1.09Å1.10Å
C5BH5BAsing1.09Å1.10Å
O6'C6'sing1.43Å1.42Å
C6'H6'sing1.09Å1.10Å
C6'H6'Asing1.09Å1.10Å
O6'HO6'sing0.97Å0.95Å
O7'C7'doub1.21Å1.23Å
C7'C8'sing1.51Å1.53Å
C8'H8'sing1.09Å1.10Å
C8'H8'Asing1.09Å1.10Å
C8'H8'Bsing1.09Å1.10Å
N3HN3sing0.97Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C1BN1C2118.1°119.7°
C1BN1C6120.8°119.7°
N1C1BO4B103.0°110.4°
N1C1BC2B119.0°110.4°
N1C1BH1B110.6°110.4°
C2N1C6121.0°120.7°
N1C2O2120.3°119.6°
N1C2N3121.0°120.9°
N1C6C5118.2°119.7°
N1C6H6120.9°120.2°
O2C2N3118.7°119.5°
C2N3C4119.1°120.3°
C2N3HN3120.5°119.9°
N3C4O4118.6°120.3°
N3C4C5120.5°119.3°
C4N3HN3120.5°119.8°
O4C4C5121.0°120.3°
C4C5C6120.2°119.1°
C4C5H5119.9°120.4°
C6C5H5119.9°120.4°
C5C6H6120.9°120.2°
O5BPAO1A110.8°109.5°
O5BPAO3A102.8°109.5°
O5BPAO2A106.9°109.5°
PAO5BC5B119.3°123.0°
O1APAO3A108.1°109.5°
O1APAO2A120.9°109.5°
O3APAO2A105.8°109.5°
PAO3APB121.5°134.0°
PAO2AHO2A109.5°114.0°
O3APBO1'100.8°109.5°
O3APBO1B111.7°109.4°
O3APBO2B108.2°109.5°
O1'PBO1B106.1°109.5°
O1'PBO2B108.7°109.5°
PBO1'C1'117.0°123.0°
O1BPBO2B119.8°109.5°
PBO2BHO2B109.5°114.0°
S5'C1'C2'109.0°108.9°
S5'C1'O1'113.5°109.6°
S5'C1'H1'105.4°109.7°
C1'S5'C5'104.6°102.2°
C2'C1'O1'111.6°109.5°
C2'C1'H1'108.1°109.6°
C1'C2'C3'110.8°110.0°
C1'C2'N2'106.0°109.4°
C1'C2'H2'109.0°109.3°
O1'C1'H1'109.0°109.6°
O4BC1BC2B101.9°104.8°
O4BC1BH1B111.0°110.3°
C1BO4BC4B107.2°105.3°
C2BC1BH1B110.5°110.4°
C1BC2BO2'109.0°110.5°
C1BC2BC3B97.5°104.1°
C1BC2BH2B112.0°110.5°
C3'C2'N2'112.6°109.4°
C3'C2'H2'108.7°109.3°
C2'C3'C4'111.3°110.8°
C2'C3'O3'110.7°109.2°
C2'C3'H3'108.2°109.3°
N2'C2'H2'109.7°109.4°
C2'N2'C7'119.7°120.0°
C2'N2'HN2'120.1°120.0°
C7'N2'HN2'120.1°120.0°
N2'C7'O7'123.5°120.0°
N2'C7'C8'114.4°120.0°
C2BO2'HO2'109.5°114.0°
O2'C2BC3B113.5°110.5°
O2'C2BH2B112.8°110.4°
C3BC2BH2B111.2°110.6°
C2BC3BO3B112.3°110.5°
C2BC3BC4B100.1°104.0°
C2BC3BH3B112.0°110.5°
C4'C3'O3'108.9°109.2°
C4'C3'H3'108.4°109.2°
C3'C4'C5'110.9°110.0°
C3'C4'O4'107.7°109.4°
C3'C4'H4'109.5°109.4°
O3'C3'H3'109.4°109.2°
C3'O3'HO3'109.5°114.0°
O3BC3BC4B106.0°110.5°
O3BC3BH3B113.2°110.6°
C3BO3BHO3B109.5°114.0°
C4BC3BH3B112.4°110.5°
C3BC4BO4B105.6°104.8°
C3BC4BC5B113.5°110.4°
C3BC4BH4B109.9°110.4°
C5'C4'O4'108.1°109.3°
C5'C4'H4'109.7°109.4°
C4'C5'C6'111.6°109.6°
C4'C5'S5'116.4°108.9°
C4'C5'H5'112.8°109.6°
O4'C4'H4'110.9°109.4°
C4'O4'HO4'109.5°114.0°
O4BC4BC5B106.9°110.4°
O4BC4BH4B111.1°110.4°
C5BC4BH4B109.7°110.4°
C4BC5BO5B110.6°109.5°
C4BC5BH5B109.2°109.5°
C4BC5BH5BA109.2°109.5°
C6'C5'S5'92.5°109.6°
C6'C5'H5'112.7°109.6°
C5'C6'O6'110.1°109.5°
C5'C6'H6'109.3°109.5°
C5'C6'H6'A109.3°109.5°
S5'C5'H5'109.3°109.6°
O5BC5BH5B109.2°109.5°
O5BC5BH5BA109.2°109.5°
H5BC5BH5BA109.5°109.4°
O6'C6'H6'109.3°109.5°
O6'C6'H6'A109.3°109.5°
C6'O6'HO6'109.5°114.0°
H6'C6'H6'A109.5°109.5°
O7'C7'C8'122.2°120.0°
C7'C8'H8'109.5°109.5°
C7'C8'H8'A109.5°109.5°
C7'C8'H8'B109.4°109.5°
H8'C8'H8'A109.5°109.5°
H8'C8'H8'B109.4°109.4°
H8'AC8'H8'B109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C1BN1C2C6175.8°179.8°
C1BN1C2O24.0°0.2°
C1BN1C2N3177.5°179.7°
C1BN1C6C5177.4°179.7°
C1BN1C6H62.6°0.2°
N1C1BO4BC2B123.9°118.8°
N1C1BO4BH1B118.4°122.3°
N1C1BC2BH1B129.6°122.3°
N1C1BC2BO2'79.0°98.5°
N1C1BC2BC3B163.0°142.8°
N1C1BC2BH2B46.5°24.1°
N1C1BO4BC4B159.6°159.3°
N1C2O2N3178.5°179.9°
N1C2N3C41.2°0.1°
C2N1C6C51.6°0.1°
C2N1C6H6178.4°180.0°
C2N1C1BO4B120.8°53.8°
C2N1C1BC2B127.5°61.6°
C2N1C1BH1B2.1°176.1°
N1C2N3HN3178.8°180.0°
C6N1C2O2179.9°180.0°
C6N1C2N31.7°0.1°
N1C6C5C41.2°0.1°
N1C6C5H6180.0°179.9°
N1C6C5H5178.8°180.0°
C6N1C1BO4B55.0°126.4°
C6N1C1BC2B56.7°118.2°
C6N1C1BH1B173.7°4.1°
O2C2N3C4179.7°180.0°
O2C2N3HN30.3°0.1°
C2N3C4HN3180.0°179.9°
C2N3C4O4179.6°180.0°
C2N3C4C50.7°0.1°
N3C4O4C5179.7°179.9°
N3C4C5C60.7°0.1°
N3C4C5H5179.3°180.0°
O4C4C5C6179.6°180.0°
O4C4C5H50.5°0.1°
O4C4N3HN30.4°0.1°
C4C5C6H5180.0°180.0°
C4C5C6H6178.8°180.0°
C5C4N3HN3179.3°180.0°
H5C5C6H61.2°0.1°
O5BPAO1AO3A111.9°120.0°
O5BPAO1AO2A126.0°120.0°
O5BPAO3AO2A111.9°120.0°
O5BPAO3APB158.4°160.0°
O5BPAO2AHO2A127.8°59.9°
PAO5BC5BC4B150.2°180.0°
PAO5BC5BH5B30.0°59.9°
PAO5BC5BH5BA89.6°60.0°
O1APAO3AO2A130.9°120.0°
O1APAO3APB84.4°40.0°
O1APAO2AHO2A0.0°179.9°
O1APAO5BC5B160.9°55.0°
PAO3APBO1'114.0°160.0°
PAO3APBO1B133.7°40.0°
PAO3APBO2B0.1°80.0°
O3APAO2AHO2A123.1°60.1°
O3APAO5BC5B45.6°175.0°
O2APAO3APB46.5°80.0°
O2APAO5BC5B65.6°65.0°
O3APBO1'O1B116.5°120.0°
O3APBO1'O2B113.5°120.0°
O3APBO1BO2B127.9°119.9°
O3APBO1'C1'58.2°175.0°
O3APBO2BHO2B129.5°60.0°
O1'PBO1BO2B123.2°120.1°
PBO1'C1'S5'108.5°90.6°
PBO1'C1'C2'127.9°150.0°
PBO1'C1'H1'8.6°29.8°
O1'PBO2BHO2B122.0°60.0°
O1BPBO1'C1'174.7°55.0°
O1BPBO2BHO2B0.0°179.9°
O2BPBO1'C1'55.3°65.0°
S5'C1'C2'O1'126.1°119.8°
S5'C1'C2'H1'114.1°120.0°
S5'C1'O1'H1'117.1°120.4°
S5'C1'C2'C3'64.0°63.0°
S5'C1'C2'N2'173.6°176.8°
S5'C1'C2'H2'55.6°57.1°
C1'S5'C5'C4'42.5°53.2°
C1'S5'C5'C6'158.2°173.1°
C1'S5'C5'H5'86.8°66.6°
C2'C1'O1'H1'119.3°120.2°
C1'C2'C3'N2'118.5°120.2°
C1'C2'C3'H2'119.7°120.1°
C1'C2'N2'H2'117.5°119.7°
C1'C2'N2'C7'96.9°84.9°
C1'C2'N2'HN2'83.1°95.0°
C1'C2'C3'C4'71.9°70.6°
C1'C2'C3'O3'166.8°169.0°
C1'C2'C3'H3'47.1°49.7°
C2'C1'S5'C5'47.4°53.2°
O1'C1'C2'C3'62.1°56.8°
O1'C1'C2'N2'60.3°63.4°
O1'C1'C2'H2'178.3°176.9°
O1'C1'S5'C5'77.6°66.6°
H1'C1'C2'C3'178.1°177.0°
H1'C1'C2'N2'59.5°56.8°
H1'C1'C2'H2'58.5°62.9°
H1'C1'S5'C5'163.2°173.1°
O4BC1BC2BH1B118.0°118.8°
O4BC1BC2BO2'168.7°142.6°
O4BC1BC2BC3B50.7°23.9°
O4BC1BC2BH2B65.8°94.8°
C1BO4BC4BC3B4.6°40.5°
C1BO4BC4BC5B125.8°159.3°
C1BO4BC4BH4B114.6°78.3°
C1BC2BO2'C3B107.4°114.7°
C1BC2BO2'H2B125.1°122.7°
C1BC2BO2'HO2'180.0°179.9°
C1BC2BC3BH2B117.1°118.7°
C1BC2BC3BO3B65.3°118.6°
C1BC2BC3BC4B46.8°0.0°
C1BC2BC3BH3B166.1°118.6°
C2BC1BO4BC4B35.7°40.5°
H1BC1BC2BO2'50.7°23.8°
H1BC1BC2BC3B67.3°94.9°
H1BC1BC2BH2B176.2°146.4°
H1BC1BO4BC4B82.0°78.4°
C3'C2'N2'H2'121.2°119.7°
C3'C2'N2'C7'141.8°154.5°
C3'C2'N2'HN2'38.2°25.5°
C2'C3'C4'O3'122.3°120.3°
C2'C3'C4'H3'118.8°120.4°
C2'C3'O3'H3'119.1°119.4°
C2'C3'O3'HO3'180.0°179.9°
C2'C3'C4'C5'61.9°70.6°
C2'C3'C4'O4'180.0°169.2°
C2'C3'C4'H4'59.3°49.5°
C2'N2'C7'HN2'180.0°179.9°
N2'C2'C3'C4'169.6°169.2°
N2'C2'C3'O3'48.3°48.9°
N2'C2'C3'H3'71.5°70.5°
C2'N2'C7'O7'2.4°0.1°
C2'N2'C7'C8'177.6°180.0°
H2'C2'N2'C7'20.6°34.8°
H2'C2'N2'HN2'159.4°145.3°
H2'C2'C3'C4'47.8°49.4°
H2'C2'C3'O3'73.4°70.9°
H2'C2'C3'H3'166.8°169.7°
N2'C7'O7'C8'180.0°179.9°
N2'C7'C8'H8'180.0°0.0°
N2'C7'C8'H8'A60.0°120.0°
N2'C7'C8'H8'B60.0°119.9°
HN2'N2'C7'O7'177.6°180.0°
HN2'N2'C7'C8'2.4°0.0°
O2'C2BC3BH2B128.4°122.6°
O2'C2BC3BO3B49.2°0.0°
O2'C2BC3BC4B161.2°118.6°
O2'C2BC3BH3B79.5°122.7°
HO2'O2'C2BC3B72.6°65.3°
HO2'O2'C2BH2B54.9°57.4°
C2BC3BO3BC4B108.3°114.6°
C2BC3BO3BH3B128.0°122.7°
C2BC3BC4BH3B119.0°118.6°
C2BC3BO3BHO3B180.0°61.4°
C2BC3BC4BO4B26.7°24.0°
C2BC3BC4BC5B90.1°142.8°
C2BC3BC4BH4B146.6°94.9°
H2BC2BC3BO3B177.6°122.6°
H2BC2BC3BC4B70.4°118.8°
H2BC2BC3BH3B48.9°0.1°
C4'C3'O3'H3'118.2°119.3°
C4'C3'O3'HO3'57.3°58.8°
C3'C4'C5'O4'117.9°120.2°
C3'C4'C5'H4'121.1°120.1°
C3'C4'O4'H4'119.8°119.8°
C3'C4'O4'HO4'180.0°180.0°
C3'C4'C5'C6'154.5°177.2°
C3'C4'C5'S5'50.1°63.0°
C3'C4'C5'H5'77.5°56.8°
O3'C3'C4'C5'175.8°169.0°
O3'C3'C4'O4'57.7°48.9°
O3'C3'C4'H4'63.0°70.9°
H3'C3'O3'HO3'60.9°60.5°
H3'C3'C4'C5'56.9°49.7°
H3'C3'C4'O4'61.2°70.4°
H3'C3'C4'H4'178.1°169.8°
O3BC3BC4BH3B124.2°122.7°
O3BC3BC4BO4B90.2°142.6°
O3BC3BC4BC5B153.1°98.6°
O3BC3BC4BH4B29.8°23.8°
C4BC3BO3BHO3B71.7°176.1°
C3BC4BO4BC5B121.1°118.8°
C3BC4BO4BH4B119.2°118.8°
C3BC4BC5BH4B123.4°122.3°
C3BC4BC5BO5B122.6°175.0°
C3BC4BC5BH5B2.4°55.0°
C3BC4BC5BH5BA117.2°65.0°
H3BC3BO3BHO3B52.0°61.3°
H3BC3BC4BO4B145.7°94.6°
H3BC3BC4BC5B28.9°24.2°
H3BC3BC4BH4B94.4°146.5°
C5'C4'O4'H4'120.3°119.7°
C5'C4'O4'HO4'60.1°59.5°
C4'C5'C6'S5'119.8°119.4°
C4'C5'C6'H5'128.1°120.3°
C4'C5'S5'H5'129.2°119.8°
C4'C5'C6'O6'28.6°55.0°
C4'C5'C6'H6'91.5°175.0°
C4'C5'C6'H6'A148.7°65.0°
O4'C4'C5'C6'87.6°57.0°
O4'C4'C5'S5'168.0°176.9°
O4'C4'C5'H5'40.4°63.3°
H4'C4'O4'HO4'60.2°60.2°
H4'C4'C5'C6'33.5°62.7°
H4'C4'C5'S5'71.0°57.2°
H4'C4'C5'H5'161.5°177.0°
O4BC4BC5BH4B120.6°122.3°
O4BC4BC5BO5B121.4°69.6°
O4BC4BC5BH5B118.4°170.4°
O4BC4BC5BH5BA1.2°50.4°
C4BC5BO5BH5B120.2°120.0°
C4BC5BO5BH5BA120.2°120.0°
C4BC5BH5BH5BA119.5°120.0°
H4BC4BC5BO5B0.8°52.7°
H4BC4BC5BH5B121.0°67.3°
H4BC4BC5BH5BA119.4°172.7°
C6'C5'S5'H5'115.1°120.3°
C5'C6'O6'H6'120.1°120.0°
C5'C6'O6'H6'A120.1°120.0°
C5'C6'H6'H6'A119.7°120.0°
C5'C6'O6'HO6'180.0°180.0°
S5'C5'C6'O6'148.4°64.4°
S5'C5'C6'H6'28.3°55.6°
S5'C5'C6'H6'A91.5°175.6°
H5'C5'C6'O6'99.5°175.3°
H5'C5'C6'H6'140.4°64.6°
H5'C5'C6'H6'A20.6°55.4°
O5BC5BH5BH5BA119.5°120.0°
O6'C6'H6'H6'A119.7°120.0°
H6'C6'O6'HO6'59.9°60.0°
H6'AC6'O6'HO6'59.9°60.0°
O7'C7'C8'H8'0.0°179.9°
O7'C7'C8'H8'A120.0°60.0°
O7'C7'C8'H8'B120.0°60.0°
C7'C8'H8'H8'A120.0°120.0°
C7'C8'H8'H8'B120.0°120.0°
C7'C8'H8'AH8'B120.0°120.0°
H8'C8'H8'AH8'B120.0°120.0°

224572

PDB entries from 2024-09-04

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