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Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C5C4sing1.53Å1.52Å
C1N3sing1.35Å1.33Å
C1O2doub1.22Å1.24Å
N3C4sing1.46Å1.48Å
C4C6sing1.53Å1.55Å
C4C10sing1.53Å1.55Å
C6C7sing1.53Å1.51Å
C7C8sing1.53Å1.52Å
C10C9sing1.53Å1.52Å
C9C8sing1.53Å1.53Å
N3H1sing0.97Å1.00Å
C5H2sing1.09Å1.10Å
C5H3sing1.09Å1.10Å
C5H4sing1.09Å1.10Å
C6H5sing1.09Å1.10Å
C6H6sing1.09Å1.10Å
C7H7sing1.09Å1.10Å
C7H8sing1.09Å1.10Å
C8H9sing1.09Å1.10Å
C8H10sing1.09Å1.10Å
C9H11sing1.09Å1.10Å
C9H12sing1.09Å1.10Å
C10H13sing1.09Å1.10Å
C10H14sing1.09Å1.10Å
C1OXTsing1.35Å198.33Å
OXTHXTsing0.97Å0.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C5C4N3108.2°109.5°
C5C4C6107.3°109.5°
C5C4C10106.1°109.4°
C4C5H2109.5°109.5°
C4C5H3109.5°109.5°
C4C5H4109.5°109.5°
N3C1O2123.1°120.0°
C1N3C4123.1°120.0°
C1N3H1118.5°120.0°
N3C1OXT18.6°120.0°
O2C1OXT122.9°120.0°
N3C4C6110.0°109.5°
N3C4C10115.2°109.5°
C4N3H1118.4°120.0°
C6C4C10109.8°109.4°
C4C6C7110.5°109.5°
C4C6H5109.2°109.5°
C4C6H6109.2°109.5°
C4C10C9111.1°109.5°
C4C10H13109.1°109.5°
C4C10H14109.1°109.4°
C6C7C8110.1°109.5°
C7C6H5109.2°109.5°
C7C6H6109.2°109.5°
C6C7H7109.3°109.5°
C6C7H8109.3°109.5°
C7C8C9111.0°109.5°
C8C7H7109.3°109.5°
C8C7H8109.3°109.5°
C7C8H9109.1°109.5°
C7C8H10109.1°109.5°
C10C9C8111.0°109.4°
C10C9H11109.1°109.5°
C10C9H12109.1°109.5°
C9C10H13109.0°109.5°
C9C10H14109.0°109.4°
C9C8H9109.1°109.5°
C9C8H10109.1°109.4°
C8C9H11109.1°109.4°
C8C9H12109.1°109.5°
H2C5H3109.4°109.5°
H2C5H4109.5°109.4°
H3C5H4109.5°109.5°
H5C6H6109.5°109.5°
H7C7H8109.5°109.4°
H9C8H10109.5°109.4°
H11C9H12109.5°109.5°
H13C10H14109.5°109.5°
C1OXTHXT90.0°117.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C5C4N3C170.1°60.0°
C5C4N3C6116.9°120.0°
C5C4N3C10118.5°120.0°
C5C4C6C10114.8°119.9°
C5C4C6C7172.2°179.9°
C5C4C10C9171.0°180.0°
C5C4N3H1109.9°120.0°
C4C5H2H3120.0°120.1°
C4C5H2H4120.0°120.0°
C4C5H3H4120.0°120.0°
C5C4C6H567.7°60.1°
C5C4C6H652.0°60.0°
C5C4C10H1350.8°59.9°
C5C4C10H1468.8°60.0°
N3C1O2OXT22.2°179.7°
C1N3C4H1180.0°179.9°
C1N3C4C6173.0°180.0°
C1N3C4C1048.3°60.0°
N3C1OXTHXT90.0°180.0°
O2C1N3C41.0°0.0°
O2C1N3H1179.0°180.0°
O2C1OXTHXT90.0°0.2°
N3C4C6C10127.7°120.0°
N3C4C6C770.4°60.0°
N3C4C10C969.3°59.9°
N3C4C5H2180.0°59.9°
N3C4C5H360.0°180.0°
N3C4C5H460.0°60.0°
N3C4C6H549.8°60.0°
N3C4C6H6169.5°180.0°
N3C4C10H13170.4°180.0°
N3C4C10H1450.9°60.0°
C4N3C1OXT94.4°179.7°
C4C6C7H5120.2°120.0°
C4C6C7H6120.2°120.0°
C4C6C7C859.1°60.0°
C6C4C10C955.4°60.1°
C6C4N3H17.0°0.0°
C6C4C5H261.4°179.9°
C6C4C5H358.6°60.0°
C6C4C5H4178.6°60.1°
C4C6H5H6119.5°120.0°
C4C6C7H760.9°60.0°
C4C6C7H8179.2°180.0°
C6C4C10H1364.8°60.0°
C6C4C10H14175.7°180.0°
C10C4C6C757.3°60.0°
C4C10C9H13120.3°120.1°
C4C10C9H14120.3°119.9°
C4C10C9C855.4°60.0°
C10C4N3H1131.7°119.9°
C10C4C5H255.9°60.1°
C10C4C5H3175.9°60.0°
C10C4C5H464.1°180.0°
C10C4C6H5177.5°180.0°
C10C4C6H662.8°60.0°
C4C10C9H11175.7°59.9°
C4C10C9H1264.8°180.0°
C4C10H13H14119.3°120.0°
C6C7C8H7120.1°120.0°
C6C7C8H8120.1°120.0°
C6C7C8C958.7°60.0°
C7C6H5H6119.5°120.0°
C6C7H7H8119.7°120.0°
C6C7C8H9179.0°180.0°
C6C7C8H1061.5°60.0°
C7C8C9C1056.9°60.0°
C7C8C9H9120.2°120.0°
C7C8C9H10120.2°120.1°
C8C7C6H5179.3°180.0°
C8C7C6H661.0°60.0°
C8C7H7H8119.7°120.0°
C7C8H9H10119.3°120.1°
C7C8C9H11177.2°60.0°
C7C8C9H1263.3°180.0°
C10C9C8H11120.2°120.0°
C10C9C8H12120.2°120.0°
C10C9C8H9177.2°180.0°
C10C9C8H1063.3°60.1°
C10C9H11H12119.3°120.1°
C9C10H13H14119.2°120.0°
C9C8C7H761.4°60.0°
C9C8C7H8178.8°180.0°
C9C8H9H10119.3°119.9°
C8C9H11H12119.3°120.0°
C8C9C10H1364.8°60.0°
C8C9C10H14175.7°180.0°
H1N3C1OXT85.6°0.2°
H2C5H3H4120.0°119.9°
H5C6C7H759.2°60.0°
H5C6C7H860.6°60.0°
H6C6C7H7178.9°180.0°
H6C6C7H859.1°60.0°
H7C7C8H958.8°60.0°
H7C7C8H10178.4°180.0°
H8C7C8H961.0°60.0°
H8C7C8H1058.6°60.0°
H9C8C9H1162.6°60.0°
H9C8C9H1256.9°60.0°
H10C8C9H1156.9°179.9°
H10C8C9H12176.5°59.9°
H11C9C10H1355.4°180.0°
H11C9C10H1464.1°60.0°
H12C9C10H13175.0°59.9°
H12C9C10H1455.5°60.1°

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PDB entries from 2024-07-17

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