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128

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
PGO1Gdoub1.48Å1.53Å
PGO2Gsing1.61Å1.52Å
PGO3Gsing1.61Å1.57Å
PGO3Bsing1.61Å1.74Å
O2GHOG2sing0.97Å0.95Å
O3GHOG3sing0.97Å0.95Å
PBO1Bdoub1.48Å1.54Å
PBO2Bsing1.61Å1.52Å
PBO3Bsing1.61Å1.63Å
PBO3Asing1.61Å1.72Å
O2BHOB2sing0.97Å0.95Å
PAO1Adoub1.48Å1.57Å
PAO2Asing1.61Å1.51Å
PAO3Asing1.61Å1.59Å
PAO5'sing1.61Å1.65Å
O2AHOA2sing0.97Å0.95Å
O5'C5'sing1.43Å1.50Å
C5'C4'sing1.53Å1.62Å
C5'H5'sing1.09Å1.10Å
C5'H5''sing1.09Å1.10Å
C4'O4'sing1.44Å1.43Å
C4'C3'sing1.54Å1.44Å
C4'H4'sing1.09Å1.10Å
O4'C1'sing1.44Å1.40Å
C3'O3'sing1.45Å1.41Å
C3'C2'sing1.56Å1.54Å
C3'H3'sing1.09Å1.10Å
O3'C1Fsing1.44Å1.48Å
C2'O2'sing1.44Å1.45Å
C2'C1'sing1.55Å1.56Å
C2'H2'sing1.09Å1.10Å
O2'C1Fsing1.44Å1.51Å
C1'N9sing1.46Å1.60Å
C1'H1'sing1.09Å1.10Å
N9C8sing1.36Å1.37ÅAromatic
N9C4sing1.37Å1.35ÅAromatic
C8N7doub1.30Å1.34ÅAromatic
C8H8sing1.08Å1.08Å
N7C5sing1.35Å1.34ÅAromatic
C5C6sing1.41Å1.44ÅAromatic
C5C4doub1.40Å1.39ÅAromatic
C6N6sing1.38Å1.35Å
C6N1doub1.33Å1.39ÅAromatic
N6HN61sing0.97Å1.00Å
N6HN62sing0.97Å1.00Å
N1C2sing1.32Å1.36ÅAromatic
C2N3doub1.32Å1.35ÅAromatic
C2H2sing1.08Å1.08Å
N3C4sing1.33Å1.37ÅAromatic
C1FC2Fsing1.50Å1.46Å
C1FC6Fsing1.50Å1.45Å
C2FC3Fdoub1.32Å1.35Å
C2FN2Fsing1.48Å1.43Å
C3FC4Fsing1.48Å1.36Å
C3FH3Fsing1.08Å1.08Å
C4FC5Fsing1.48Å1.38Å
C4FN4Fdoub1.31Å1.32Å
O4FH4Fsing0.97Å0.95Å
C5FC6Fdoub1.32Å1.45Å
C5FH5Fsing1.08Å1.08Å
C6FN6Fsing1.48Å1.40Å
N2FO2Fdoub1.22Å1.20Å
N2FO3Fsing1.22Å1.21Å
N4FO4Fsing1.42Å1.21Å
N4FO5Fsing1.42Å1.19Å
N6FO6Fdoub1.22Å1.21Å
N6FO7Fsing1.22Å1.19Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O1GPGO2G110.4°109.5°
O1GPGO3G117.3°109.5°
O1GPGO3B109.4°109.5°
O2GPGO3G115.6°109.5°
O2GPGO3B105.5°109.5°
PGO2GHOG2109.5°114.0°
O3GPGO3B96.9°109.5°
PGO3GHOG3109.5°114.0°
PGO3BPB137.5°134.0°
O1BPBO2B115.9°109.5°
O1BPBO3B102.2°109.5°
O1BPBO3A105.8°109.5°
O2BPBO3B112.1°109.5°
O2BPBO3A100.7°109.4°
PBO2BHOB2109.5°114.0°
O3BPBO3A120.8°109.5°
PBO3APA137.3°134.0°
O1APAO2A112.5°109.5°
O1APAO3A106.9°109.5°
O1APAO5'99.5°109.5°
O2APAO3A112.7°109.5°
O2APAO5'124.3°109.5°
PAO2AHOA2109.5°114.0°
O3APAO5'98.8°109.5°
PAO5'C5'122.1°123.0°
O5'C5'C4'104.4°109.5°
O5'C5'H5'110.7°109.4°
O5'C5'H5''110.7°109.5°
C4'C5'H5'110.7°109.5°
C4'C5'H5''110.7°109.5°
C5'C4'O4'112.5°109.8°
C5'C4'C3'120.1°109.8°
C5'C4'H4'105.8°109.9°
H5'C5'H5''109.5°109.5°
O4'C4'C3'102.4°107.4°
O4'C4'H4'107.8°109.9°
C4'O4'C1'121.0°106.9°
C3'C4'H4'107.7°110.0°
C4'C3'O3'105.4°108.6°
C4'C3'C2'107.8°104.1°
C4'C3'H3'113.4°113.2°
O4'C1'C2'97.3°103.9°
O4'C1'N9106.4°110.5°
O4'C1'H1'116.1°110.5°
O3'C3'C2'103.8°102.9°
O3'C3'H3'113.9°113.2°
C3'O3'C1F101.8°103.7°
C2'C3'H3'111.8°114.0°
C3'C2'O2'111.9°105.0°
C3'C2'C1'106.2°102.2°
C3'C2'H2'108.3°113.2°
O3'C1FO2'115.1°105.9°
O3'C1FC2F117.1°109.2°
O3'C1FC6F96.2°109.3°
O2'C2'C1'112.4°109.0°
O2'C2'H2'109.7°113.0°
C2'O2'C1F97.4°107.3°
C1'C2'H2'108.1°113.6°
C2'C1'N9110.0°110.6°
C2'C1'H1'113.3°110.5°
O2'C1FC2F100.9°109.5°
O2'C1FC6F114.4°109.5°
N9C1'H1'112.6°110.6°
C1'N9C8125.4°126.3°
C1'N9C4127.6°126.3°
C8N9C4107.0°107.4°
N9C8N7110.6°110.0°
N9C8H8124.7°125.0°
N9C4C5106.3°106.0°
N9C4N3137.3°134.9°
N7C8H8124.7°124.9°
C8N7C5106.1°109.4°
N7C5C6129.2°134.7°
N7C5C4110.0°107.2°
C6C5C4120.7°118.1°
C5C6N6119.7°120.8°
C5C6N1119.5°118.5°
C5C4N3116.4°119.1°
N6C6N1120.8°120.8°
C6N6HN61109.5°120.0°
C6N6HN62109.5°120.0°
C6N1C2117.2°121.2°
HN61N6HN62109.4°120.0°
N1C2N3123.1°122.4°
N1C2H2118.5°118.8°
N3C2H2118.5°118.8°
C2N3C4123.1°120.7°
C2FC1FC6F114.1°113.1°
C1FC2FC3F122.0°123.1°
C1FC2FN2F121.4°118.4°
C1FC6FC5F118.8°123.0°
C1FC6FN6F125.4°118.5°
C3FC2FN2F116.6°118.5°
C2FC3FC4F125.6°119.3°
C2FC3FH3F117.2°120.3°
C2FN2FO2F123.9°120.0°
C2FN2FO3F120.3°120.0°
C4FC3FH3F117.2°120.4°
C3FC4FC5F115.8°117.7°
C3FC4FN4F126.9°121.2°
C5FC4FN4F117.4°121.2°
C4FC5FC6F123.7°119.4°
C4FC5FH5F118.2°120.3°
C4FN4FO4F123.4°120.0°
C4FN4FO5F121.2°120.0°
H4FO4FN4F109.5°114.0°
C6FC5FH5F118.2°120.3°
C5FC6FN6F115.8°118.5°
C6FN6FO6F118.6°120.0°
C6FN6FO7F125.1°120.0°
O2FN2FO3F115.8°120.0°
O4FN4FO5F115.3°120.0°
O6FN6FO7F116.3°120.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O1GPGO2GO3G136.2°120.0°
O1GPGO2GO3B118.1°120.0°
O1GPGO3GO3B116.1°120.0°
O1GPGO2GHOG20.0°180.0°
O1GPGO3GHOG30.0°60.0°
O1GPGO3BPB54.1°45.0°
O2GPGO3GO3B110.9°120.0°
O2GPGO3GHOG3133.1°60.0°
O2GPGO3BPB172.8°75.0°
O3GPGO2GHOG2136.2°60.0°
O3GPGO3BPB68.2°165.0°
O3BPGO2GHOG2118.1°60.0°
O3BPGO3GHOG3116.0°180.0°
PGO3BPBO1B24.0°45.0°
PGO3BPBO2B100.8°75.0°
PGO3BPBO3A140.8°165.0°
O1BPBO2BO3B116.8°120.0°
O1BPBO2BO3A113.5°120.0°
O1BPBO3BO3A116.8°120.0°
O1BPBO2BHOB20.0°180.0°
O1BPBO3APA172.3°40.0°
O2BPBO3BO3A118.4°120.0°
O2BPBO3APA66.7°80.0°
O3BPBO2BHOB2116.7°60.0°
O3BPBO3APA57.3°160.0°
O3APBO2BHOB2113.6°60.0°
PBO3APAO1A31.6°40.0°
PBO3APAO2A155.7°80.0°
PBO3APAO5'71.2°160.0°
O1APAO2AO3A121.0°120.0°
O1APAO2AO5'119.9°120.0°
O1APAO3AO5'102.8°120.0°
O1APAO2AHOA20.0°180.0°
O1APAO5'C5'54.8°55.0°
O2APAO3AO5'133.1°120.0°
O2APAO5'C5'179.5°65.0°
O3APAO2AHOA2121.0°60.0°
O3APAO5'C5'54.1°175.0°
O5'PAO2AHOA2119.9°60.0°
PAO5'C5'C4'156.5°180.0°
PAO5'C5'H5'37.3°60.0°
PAO5'C5'H5''84.3°60.0°
O5'C5'C4'H5'119.2°120.0°
O5'C5'C4'H5''119.2°120.0°
O5'C5'H5'H5''122.3°120.0°
O5'C5'C4'O4'125.2°66.5°
O5'C5'C4'C3'4.7°175.6°
O5'C5'C4'H4'117.3°54.5°
C4'C5'H5'H5''122.4°120.0°
C5'C4'O4'C3'130.3°119.4°
C5'C4'O4'H4'116.3°120.9°
C5'C4'C3'H4'121.0°121.0°
C5'C4'O4'C1'139.8°147.0°
C5'C4'C3'O3'131.3°127.7°
C5'C4'C3'C2'118.3°123.3°
C5'C4'C3'H3'6.0°1.1°
H5'C5'C4'O4'115.6°53.5°
H5'C5'C4'C3'123.9°64.4°
H5'C5'C4'H4'1.9°174.5°
H5''C5'C4'O4'6.0°173.5°
H5''C5'C4'C3'114.5°55.6°
H5''C5'C4'H4'123.5°65.5°
O4'C4'C3'H4'113.5°119.6°
O4'C4'C3'O3'103.2°112.9°
O4'C4'C3'C2'7.2°3.9°
O4'C4'C3'H3'131.5°120.5°
C4'O4'C1'C2'20.5°40.0°
C4'O4'C1'N9133.9°158.6°
C4'O4'C1'H1'99.9°78.6°
C3'C4'O4'C1'9.6°27.5°
C4'C3'O3'C2'113.2°109.9°
C4'C3'O3'H3'125.0°126.6°
C4'C3'C2'H3'125.3°123.8°
C4'C3'O3'C1F143.2°145.3°
C4'C3'C2'O2'142.2°132.8°
C4'C3'C2'C1'19.2°19.0°
C4'C3'C2'H2'96.8°103.6°
H4'C4'O4'C1'103.9°92.1°
H4'C4'C3'O3'10.3°6.6°
H4'C4'C3'C2'120.7°115.7°
H4'C4'C3'H3'115.0°119.9°
O4'C1'C2'C3'22.0°35.8°
O4'C1'C2'O2'144.7°146.5°
O4'C1'C2'N9110.5°118.6°
O4'C1'C2'H1'122.5°118.6°
O4'C1'C2'H2'94.1°86.5°
O4'C1'N9H1'128.3°122.8°
O4'C1'N9C897.5°23.6°
O4'C1'N9C482.1°156.8°
O3'C3'C2'H3'123.2°123.0°
O3'C3'C2'O2'30.7°19.5°
O3'C3'C2'C1'92.3°94.2°
O3'C3'C2'H2'151.7°143.2°
C3'O3'C1FO2'24.0°39.4°
C3'O3'C1FC2F94.3°78.5°
C3'O3'C1FC6F144.6°157.4°
C2'C3'O3'C1F30.0°35.4°
C3'C2'O2'C1'119.4°108.9°
C3'C2'O2'H2'120.2°123.8°
C3'C2'C1'H2'116.1°122.3°
C3'C2'O2'C1F14.7°4.0°
C3'C2'C1'N9132.5°154.4°
C3'C2'C1'H1'100.5°82.8°
H3'C3'O3'C1F91.9°88.2°
H3'C3'C2'O2'92.5°103.4°
H3'C3'C2'C1'144.5°142.9°
H3'C3'C2'H2'28.5°20.3°
O3'C1FO2'C2'5.2°26.6°
O3'C1FO2'C2F127.0°117.7°
O3'C1FO2'C6F110.0°117.7°
O3'C1FC2FC6F111.2°121.9°
O3'C1FC2FC3F110.0°138.8°
O3'C1FC2FN2F69.8°41.3°
O3'C1FC6FC5F122.5°138.7°
O3'C1FC6FN6F57.5°41.3°
O2'C2'C1'H2'121.2°126.9°
O2'C2'C1'N9104.9°94.9°
O2'C2'C1'H1'22.1°28.0°
C2'O2'C1FC2F121.8°91.1°
C2'O2'C1FC6F115.3°144.4°
C1'C2'O2'C1F104.7°112.9°
C2'C1'N9H1'127.4°122.8°
C2'C1'N9C8158.1°90.9°
C2'C1'N9C422.2°88.8°
H2'C2'O2'C1F135.0°119.8°
H2'C2'C1'N916.4°32.1°
H2'C2'C1'H1'143.4°154.9°
O2'C1FC2FC6F123.1°122.5°
O2'C1FC2FC3F124.3°105.7°
O2'C1FC2FN2F55.9°74.3°
O2'C1FC6FC5F116.4°105.7°
O2'C1FC6FN6F63.6°74.3°
C1'N9C8C4179.7°179.7°
C1'N9C8N7179.8°180.0°
C1'N9C8H80.2°0.1°
C1'N9C4C5180.0°179.9°
C1'N9C4N30.0°0.8°
H1'C1'N9C830.7°146.3°
H1'C1'N9C4149.6°34.0°
N9C8N7H8180.0°180.0°
N9C8N7C50.2°0.0°
C8N9C4C50.3°0.4°
C8N9C4N3179.7°179.5°
C4N9C8N70.1°0.3°
C4N9C8H8179.9°179.8°
N9C4C5N70.4°0.4°
N9C4C5C6179.7°179.8°
N9C4C5N3180.0°179.2°
N9C4N3C2180.0°179.5°
C8N7C5C6179.5°180.0°
C8N7C5C40.4°0.3°
H8C8N7C5179.8°179.9°
N7C5C6C4179.1°179.7°
N7C5C6N61.2°0.0°
N7C5C6N1179.8°180.0°
N7C5C4N3179.6°179.7°
C5C6N6N1179.0°180.0°
C5C6N6HN61179.0°0.0°
C5C6N6HN6259.1°180.0°
C5C6N1C20.7°0.0°
C6C5C4N30.3°0.6°
C4C5C6N6179.7°179.7°
C4C5C6N10.7°0.3°
C5C4N3C20.0°0.6°
C6N6HN61HN62120.0°180.0°
N6C6N1C2179.7°179.9°
N1C6N6HN610.0°180.0°
N1C6N6HN62120.0°0.0°
C6N1C2N30.4°0.0°
C6N1C2H2179.6°180.0°
N1C2N3H2180.0°179.9°
N1C2N3C40.1°0.4°
H2C2N3C4179.9°179.7°
C1FC2FC3FN2F179.8°179.9°
C1FC2FC3FC4F0.7°0.6°
C1FC2FC3FH3F179.3°179.4°
C2FC1FC6FC5F0.9°16.8°
C2FC1FC6FN6F179.1°163.2°
C1FC2FN2FO2F0.1°86.3°
C1FC2FN2FO3F179.4°93.8°
C6FC1FC2FC3F1.2°16.8°
C6FC1FC2FN2F179.1°163.2°
C1FC6FC5FC4F0.1°0.6°
C1FC6FC5FN6F180.0°180.0°
C1FC6FC5FH5F179.9°179.3°
C1FC6FN6FO6F179.9°180.0°
C1FC6FN6FO7F0.6°0.0°
C2FC3FC4FH3F180.0°180.0°
C2FC3FC4FC5F0.2°16.7°
C2FC3FC4FN4F180.0°163.3°
C3FC2FN2FO2F179.7°93.7°
C3FC2FN2FO3F0.3°86.3°
N2FC2FC3FC4F179.6°179.4°
N2FC2FC3FH3F0.5°0.6°
C2FN2FO2FO3F179.3°179.9°
C3FC4FC5FN4F179.8°180.0°
C3FC4FC5FC6F0.4°16.7°
C3FC4FC5FH5F179.5°163.4°
C3FC4FN4FO4F179.7°180.0°
C3FC4FN4FO5F0.7°0.0°
H3FC3FC4FC5F179.9°163.3°
H3FC3FC4FN4F0.0°16.7°
C4FC5FC6FH5F180.0°179.9°
C4FC5FC6FN6F179.9°179.4°
C5FC4FN4FO4F0.5°0.0°
C5FC4FN4FO5F179.5°180.0°
C4FN4FO4FH4F179.0°180.0°
N4FC4FC5FC6F179.7°163.3°
N4FC4FC5FH5F0.3°16.6°
C4FN4FO4FO5F179.0°180.0°
H4FO4FN4FO5F0.0°0.0°
C5FC6FN6FO6F0.1°0.0°
C5FC6FN6FO7F179.4°180.0°
H5FC5FC6FN6F0.1°0.7°
C6FN6FO6FO7F179.5°180.0°

222415

PDB entries from 2024-07-10

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