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124

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C1C2sing1.40Å1.41ÅAromatic
C1C6doub1.39Å1.40ÅAromatic
C1C7sing1.48Å1.40Å
C2C3doub1.36Å1.38ÅAromatic
C2HC2sing1.08Å1.08Å
C3C4sing1.39Å1.37ÅAromatic
C3HC3sing1.08Å1.07Å
C4C5doub1.41Å1.35ÅAromatic
C4N3sing1.38Å1.31ÅAromatic
C5C6sing1.39Å1.38ÅAromatic
C5C9sing1.46Å1.37ÅAromatic
C6HC6sing1.08Å1.07Å
C7N1sing1.33Å1.32Å
C7N2doub1.33Å1.33Å
N1HH11sing0.97Å1.01Å
N1HH12sing0.97Å1.00Å
N2HH21sing0.97Å1.01Å
N2HH22sing0.97Å1.00Å
N3C8sing1.38Å1.31ÅAromatic
N3HN3sing0.97Å0.99Å
C9C8doub1.36Å1.37ÅAromatic
C9HC9sing1.08Å1.08Å
C8C1'sing1.48Å1.39ÅAromatic
C1'C2'doub1.39Å1.39ÅAromatic
C1'C6'sing1.40Å1.40ÅAromatic
C2'C3'sing1.38Å1.38ÅAromatic
C2'HC2'sing1.08Å1.08Å
C3'C4'doub1.38Å1.39ÅAromatic
C3'HC3'sing1.08Å1.08Å
C4'C5'sing1.38Å1.41ÅAromatic
C4'HC4'sing1.08Å1.08Å
C5'C6'doub1.39Å1.39ÅAromatic
C5'HC5'sing1.08Å1.09Å
C6'O6'sing1.36Å1.39Å
O6'HO6sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C2C1C6119.4°120.0°
C2C1C7119.2°120.0°
C1C2C3121.0°120.7°
C1C2HC2121.3°119.6°
C6C1C7121.5°120.0°
C1C6C5117.5°119.4°
C1C6HC6121.8°120.2°
C1C7N1118.8°120.0°
C1C7N2119.3°120.0°
C3C2HC2117.7°119.7°
C2C3C4118.3°120.3°
C2C3HC3121.9°119.8°
C4C3HC3119.8°119.9°
C3C4C5121.3°119.5°
C3C4N3129.1°133.0°
C5C4N3109.6°107.4°
C4C5C6122.6°120.0°
C4C5C9105.9°106.3°
C4N3C8109.8°109.8°
C4N3HN3127.8°125.1°
C6C5C9131.5°133.7°
C5C6HC6120.7°120.3°
C5C9C8106.8°106.8°
C5C9HC9127.8°126.6°
N1C7N2121.9°120.0°
C7N1HH11118.6°120.0°
C7N1HH12125.6°120.0°
C7N2HH21119.8°120.0°
C7N2HH22124.0°119.9°
HH11N1HH12115.8°120.0°
HH21N2HH22116.2°120.0°
C8N3HN3122.4°125.0°
N3C8C9107.8°109.6°
N3C8C1'125.0°125.2°
C8C9HC9125.4°126.6°
C9C8C1'127.2°125.2°
C8C1'C2'118.9°120.2°
C8C1'C6'120.3°120.2°
C2'C1'C6'120.8°119.6°
C1'C2'C3'120.5°120.0°
C1'C2'HC2'121.1°120.0°
C1'C6'C5'118.8°119.7°
C1'C6'O6'121.5°120.2°
C3'C2'HC2'118.4°120.1°
C2'C3'C4'119.4°120.3°
C2'C3'HC3'120.4°119.9°
C4'C3'HC3'120.2°119.8°
C3'C4'C5'120.5°120.3°
C3'C4'HC4'119.5°119.9°
C5'C4'HC4'120.0°119.8°
C4'C5'C6'120.0°120.1°
C4'C5'HC5'119.4°120.0°
C6'C5'HC5'120.6°119.9°
C5'C6'O6'119.7°120.1°
C6'O6'HO6109.5°106.8°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C2C1C6C7178.9°179.6°
C1C2C3HC2178.4°179.9°
C1C2C3C40.1°0.1°
C1C2C3HC3179.5°180.0°
C2C1C6C50.3°0.6°
C2C1C6HC6179.6°179.6°
C2C1C7N1167.7°180.0°
C2C1C7N211.6°0.1°
C6C1C2C30.2°0.3°
C6C1C2HC2178.5°179.7°
C1C6C5C40.1°0.6°
C1C6C5HC6179.9°179.8°
C1C6C5C9179.2°179.8°
C6C1C7N111.2°0.4°
C6C1C7N2169.5°179.7°
C7C1C2C3178.7°180.0°
C7C1C2HC20.4°0.1°
C7C1C6C5178.6°179.8°
C7C1C6HC61.5°0.0°
C1C7N1N2179.3°179.9°
C1C7N1HH110.6°180.0°
C1C7N1HH12178.6°0.0°
C1C7N2HH212.1°0.1°
C1C7N2HH22177.8°179.7°
C2C3C4HC3179.4°180.0°
C2C3C4C50.3°0.0°
C2C3C4N3179.4°179.9°
HC2C2C3C4178.3°180.0°
HC2C2C3HC31.2°0.1°
C3C4C5N3179.8°180.0°
C3C4C5C60.3°0.3°
C3C4C5C9179.7°180.0°
C3C4N3C8179.3°180.0°
C3C4N3HN32.8°0.0°
HC3C3C4C5179.8°180.0°
HC3C3C4N30.0°0.0°
C4C5C6C9179.3°179.6°
C4C5C6HC6179.9°179.7°
C5C4N3C80.4°0.0°
C5C4N3HN3177.5°180.0°
C4C5C9C80.3°0.0°
C4C5C9HC9177.7°180.0°
N3C4C5C6179.5°179.7°
N3C4C5C90.1°0.0°
C4N3C8HN3178.0°180.0°
C4N3C8C90.6°0.0°
C4N3C8C1'179.2°180.0°
C6C5C9C8179.1°179.7°
C6C5C9HC92.9°0.3°
C9C5C6HC60.8°0.0°
C5C9C8N30.5°0.0°
C5C9C8HC9178.0°180.0°
C5C9C8C1'179.2°180.0°
C7N1HH11HH12179.3°180.0°
N1C7N2HH21178.6°180.0°
N1C7N2HH221.4°0.2°
N2C7N1HH11178.7°0.0°
N2C7N1HH122.1°180.0°
C7N2HH21HH22179.9°179.8°
N3C8C9C1'179.7°180.0°
N3C8C9HC9177.5°180.0°
N3C8C1'C2'165.5°140.0°
N3C8C1'C6'15.0°40.2°
HN3N3C8C9177.4°180.0°
HN3N3C8C1'2.8°0.0°
C9C8C1'C2'14.2°40.0°
C9C8C1'C6'165.3°139.7°
HC9C9C8C1'2.8°0.0°
C8C1'C2'C6'179.5°179.8°
C8C1'C2'C3'179.9°180.0°
C8C1'C2'HC2'0.1°0.0°
C8C1'C6'C5'180.0°179.7°
C8C1'C6'O6'0.4°0.2°
C1'C2'C3'HC2'180.0°180.0°
C1'C2'C3'C4'0.5°0.0°
C1'C2'C3'HC3'178.7°180.0°
C2'C1'C6'C5'0.5°0.5°
C2'C1'C6'O6'179.9°180.0°
C6'C1'C2'C3'0.6°0.2°
C6'C1'C2'HC2'179.4°179.8°
C1'C6'C5'C4'0.4°0.6°
C1'C6'C5'O6'179.6°179.5°
C1'C6'C5'HC5'178.8°179.7°
C1'C6'O6'HO6173.9°90.5°
C2'C3'C4'HC3'179.2°180.0°
C2'C3'C4'C5'0.4°0.0°
C2'C3'C4'HC4'178.3°179.9°
HC2'C2'C3'C4'179.5°180.0°
HC2'C2'C3'HC3'1.3°0.0°
C3'C4'C5'HC4'177.9°179.9°
C3'C4'C5'C6'0.3°0.3°
C3'C4'C5'HC5'178.8°180.0°
HC3'C3'C4'C5'178.8°180.0°
HC3'C3'C4'HC4'0.9°0.1°
C4'C5'C6'HC5'179.1°179.7°
C4'C5'C6'O6'180.0°180.0°
HC4'C4'C5'C6'178.2°179.8°
HC4'C4'C5'HC5'0.9°0.1°
C5'C6'O6'HO65.8°90.0°
HC5'C5'C6'O6'0.9°0.3°

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PDB entries from 2024-09-11

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