0YN

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
O5G	C5B	sing	1.43Å	1.43Å
C5B	C5A	sing	1.53Å	1.52Å
C5A	C5	sing	1.51Å	1.51Å
C5	C4	doub	1.33Å	1.49Å	Aromatic
C5	S1	sing	1.76Å	1.72Å	Aromatic
C4A	C4	sing	1.51Å	1.51Å
C4	C3	sing	1.38Å	1.41Å	Aromatic
S1	C2	sing	1.76Å	1.73Å	Aromatic
C3	C2	doub	1.33Å	1.40Å	Aromatic
C3	C35	sing	1.51Å	1.51Å
C35	C5'	sing	1.51Å	1.51Å
C5'	C6'	doub	1.38Å	1.39Å	Aromatic
C5'	C4'	sing	1.40Å	1.38Å	Aromatic
C6'	N1'	sing	1.33Å	1.34Å	Aromatic
N4'	C4'	sing	1.39Å	1.35Å
C4'	N3'	doub	1.33Å	1.35Å	Aromatic
N1'	C2'	doub	1.32Å	1.35Å	Aromatic
N3'	C2'	sing	1.32Å	1.35Å	Aromatic
C2'	C2A	sing	1.51Å	1.50Å
C2A	H1	sing	1.09Å	1.10Å
C2A	H2	sing	1.09Å	1.10Å
C2A	H3	sing	1.09Å	1.10Å
C35	H4	sing	1.09Å	1.10Å
C35	H5	sing	1.09Å	1.10Å
C2	H6	sing	1.08Å	1.08Å
C4A	H7	sing	1.09Å	1.10Å
C4A	H8	sing	1.09Å	1.10Å
C4A	H9	sing	1.09Å	1.10Å
C5A	H10	sing	1.09Å	1.10Å
C5A	H11	sing	1.09Å	1.10Å
C5B	H12	sing	1.09Å	1.10Å
C5B	H13	sing	1.09Å	1.10Å
O5G	H14	sing	0.97Å	0.95Å
N4'	H15	sing	0.97Å	1.00Å
N4'	H16	sing	0.97Å	1.00Å
C6'	H17	sing	1.08Å	1.08Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
O5G	C5B	C5A	109.4°	109.4°
O5G	C5B	H12	109.5°	109.5°
O5G	C5B	H13	109.5°	109.5°
C5B	O5G	H14	109.5°	113.9°
C5B	C5A	C5	110.2°	109.4°
C5B	C5A	H10	109.3°	109.4°
C5B	C5A	H11	109.3°	109.5°
C5A	C5B	H12	109.5°	109.4°
C5A	C5B	H13	109.5°	109.5°
C5A	C5	C4	135.7°	125.2°
C5A	C5	S1	116.1°	125.2°
C5	C5A	H10	109.3°	109.5°
C5	C5A	H11	109.3°	109.4°
C4	C5	S1	108.1°	109.6°
C5	C4	C4A	124.5°	122.6°
C5	C4	C3	111.8°	115.0°
C5	S1	C2	95.6°	91.0°
C4A	C4	C3	123.7°	122.5°
C4	C4A	H7	109.5°	109.5°
C4	C4A	H8	109.5°	109.5°
C4	C4A	H9	109.5°	109.5°
C4	C3	C2	114.9°	114.9°
C4	C3	C35	122.2°	122.6°
S1	C2	C3	109.6°	109.6°
S1	C2	H6	125.2°	125.2°
C2	C3	C35	122.9°	122.5°
C3	C2	H6	125.2°	125.2°
C3	C35	C5'	110.8°	109.5°
C3	C35	H4	109.1°	109.5°
C3	C35	H5	109.1°	109.5°
C35	C5'	C6'	120.8°	120.8°
C35	C5'	C4'	120.2°	120.8°
C5'	C35	H4	109.2°	109.4°
C5'	C35	H5	109.1°	109.5°
C6'	C5'	C4'	119.0°	118.3°
C5'	C6'	N1'	119.7°	119.2°
C5'	C6'	H17	120.1°	120.4°
C5'	C4'	N4'	120.2°	120.6°
C5'	C4'	N3'	119.6°	118.9°
C6'	N1'	C2'	120.7°	121.0°
N1'	C6'	H17	120.2°	120.4°
N4'	C4'	N3'	120.2°	120.5°
C4'	N4'	H15	109.5°	120.0°
C4'	N4'	H16	109.5°	120.0°
C4'	N3'	C2'	120.5°	120.7°
N1'	C2'	N3'	120.5°	121.8°
N1'	C2'	C2A	119.7°	119.1°
N3'	C2'	C2A	119.8°	119.1°
C2'	C2A	H1	109.5°	109.5°
C2'	C2A	H2	109.5°	109.5°
C2'	C2A	H3	109.4°	109.5°
H1	C2A	H2	109.5°	109.5°
H1	C2A	H3	109.5°	109.4°
H2	C2A	H3	109.5°	109.5°
H4	C35	H5	109.5°	109.5°
H7	C4A	H8	109.5°	109.5°
H7	C4A	H9	109.5°	109.5°
H8	C4A	H9	109.5°	109.4°
H10	C5A	H11	109.5°	109.5°
H12	C5B	H13	109.5°	109.6°
H15	N4'	H16	109.5°	120.0°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
O5G	C5B	C5A	H12	120.0°	119.9°
O5G	C5B	C5A	H13	120.0°	120.0°
O5G	C5B	C5A	C5	170.9°	180.0°
O5G	C5B	C5A	H10	69.0°	60.0°
O5G	C5B	C5A	H11	50.8°	60.0°
O5G	C5B	H12	H13	120.0°	120.0°
C5B	C5A	C5	H10	120.1°	120.0°
C5B	C5A	C5	H11	120.1°	120.0°
C5B	C5A	C5	C4	58.9°	90.0°
C5B	C5A	C5	S1	120.3°	89.7°
C5B	C5A	H10	H11	119.7°	120.0°
C5A	C5B	H12	H13	120.1°	120.0°
C5A	C5B	O5G	H14	180.0°	180.0°
C5A	C5	C4	S1	179.3°	179.8°
C5A	C5	C4	C4A	0.8°	0.2°
C5A	C5	C4	C3	179.8°	180.0°
C5A	C5	S1	C2	179.8°	179.8°
C5	C5A	H10	H11	119.6°	120.0°
C5	C5A	C5B	H12	50.9°	60.0°
C5	C5A	C5B	H13	69.1°	60.0°
C5	C4	C4A	C3	179.3°	179.8°
C4	C5	S1	C2	0.3°	0.0°
C5	C4	C3	C2	0.5°	0.4°
C5	C4	C3	C35	179.9°	180.0°
C5	C4	C4A	H7	89.7°	90.0°
C5	C4	C4A	H8	150.3°	150.0°
C5	C4	C4A	H9	30.4°	30.0°
C4	C5	C5A	H10	61.2°	150.0°
C4	C5	C5A	H11	179.1°	29.9°
S1	C5	C4	C4A	179.9°	180.0°
S1	C5	C4	C3	0.5°	0.2°
C5	S1	C2	C3	0.0°	0.3°
C5	S1	C2	H6	180.0°	180.0°
S1	C5	C5A	H10	119.5°	30.2°
S1	C5	C5A	H11	0.2°	150.3°
C4A	C4	C3	C2	179.9°	179.8°
C4A	C4	C3	C35	0.5°	0.2°
C4	C4A	H7	H8	120.0°	120.1°
C4	C4A	H7	H9	120.0°	120.0°
C4	C4A	H8	H9	120.0°	120.0°
C4	C3	C2	S1	0.3°	0.4°
C4	C3	C2	C35	179.6°	179.6°
C4	C3	C35	C5'	159.8°	85.0°
C4	C3	C35	H4	80.0°	35.0°
C4	C3	C35	H5	39.6°	155.0°
C4	C3	C2	H6	179.7°	179.9°
C3	C4	C4A	H7	89.6°	89.8°
C3	C4	C4A	H8	30.4°	30.3°
C3	C4	C4A	H9	150.3°	150.2°
S1	C2	C3	H6	180.0°	179.7°
S1	C2	C3	C35	179.9°	180.0°
C2	C3	C35	C5'	20.7°	95.5°
C2	C3	C35	H4	99.5°	144.6°
C2	C3	C35	H5	140.8°	24.5°
C3	C35	C5'	H4	120.2°	120.0°
C3	C35	C5'	H5	120.2°	120.1°
C3	C35	C5'	C6'	85.6°	95.0°
C3	C35	C5'	C4'	94.8°	85.0°
C3	C35	H4	H5	119.4°	120.1°
C35	C3	C2	H6	0.2°	0.3°
C35	C5'	C6'	C4'	179.6°	179.9°
C35	C5'	C6'	N1'	179.9°	180.0°
C35	C5'	C4'	N4'	0.2°	0.0°
C35	C5'	C4'	N3'	179.9°	180.0°
C5'	C35	H4	H5	119.4°	120.0°
C35	C5'	C6'	H17	0.1°	0.1°
C5'	C6'	N1'	H17	180.0°	179.9°
C6'	C5'	C4'	N4'	179.9°	180.0°
C6'	C5'	C4'	N3'	0.2°	0.1°
C5'	C6'	N1'	C2'	0.2°	0.0°
C6'	C5'	C35	H4	34.6°	25.0°
C6'	C5'	C35	H5	154.2°	145.0°
C4'	C5'	C6'	N1'	0.3°	0.0°
C5'	C4'	N4'	N3'	179.9°	180.0°
C5'	C4'	N3'	C2'	0.1°	0.0°
C4'	C5'	C35	H4	145.0°	155.0°
C4'	C5'	C35	H5	25.4°	35.1°
C5'	C4'	N4'	H15	179.9°	180.0°
C5'	C4'	N4'	H16	60.1°	0.0°
C4'	C5'	C6'	H17	179.7°	180.0°
C6'	N1'	C2'	N3'	0.1°	0.0°
C6'	N1'	C2'	C2A	180.0°	180.0°
N4'	C4'	N3'	C2'	180.0°	180.0°
C4'	N4'	H15	H16	120.0°	180.0°
C4'	N3'	C2'	N1'	0.0°	0.0°
C4'	N3'	C2'	C2A	179.9°	180.0°
N3'	C4'	N4'	H15	0.0°	0.0°
N3'	C4'	N4'	H16	120.0°	180.0°
N1'	C2'	N3'	C2A	180.0°	180.0°
N1'	C2'	C2A	H1	0.0°	90.0°
N1'	C2'	C2A	H2	120.0°	150.0°
N1'	C2'	C2A	H3	120.0°	30.0°
C2'	N1'	C6'	H17	179.8°	180.0°
N3'	C2'	C2A	H1	180.0°	90.0°
N3'	C2'	C2A	H2	60.0°	30.0°
N3'	C2'	C2A	H3	60.0°	150.0°
C2'	C2A	H1	H2	120.0°	120.0°
C2'	C2A	H1	H3	120.0°	120.0°
C2'	C2A	H2	H3	120.0°	120.0°
H1	C2A	H2	H3	120.0°	120.0°
H7	C4A	H8	H9	120.0°	120.0°
H10	C5A	C5B	H12	171.1°	179.9°
H10	C5A	C5B	H13	51.0°	60.0°
H11	C5A	C5B	H12	69.2°	59.9°
H11	C5A	C5B	H13	170.8°	180.0°
H12	C5B	O5G	H14	60.0°	60.1°
H13	C5B	O5G	H14	60.0°	60.0°

Release date:	2013-10-02
Definition date:	2012-10-08
Last modified:	2013-09-27
Release status:	REL
Processing site:	RCSB
Derived from:	4HCY