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0YG

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C3O3doub1.21Å1.22Å
C3CA3sing1.51Å1.45Å
C3OXTsing1.34Å1.23Å
C2O2doub1.22Å1.23Å
C2N3sing1.35Å1.32Å
C2CA2sing1.47Å1.39Å
N2CA2sing1.40Å1.38Å
N2HN2sing0.97Å1.00Å
N2HN2Asing0.97Å1.00Å
N3CA3sing1.47Å1.40Å
N3HN3sing0.97Å1.00Å
OHCZsing1.36Å1.25Å
OHHOHsing0.97Å0.95Å
CZCE1doub1.39Å1.40ÅAromatic
CZCE2sing1.39Å1.40ÅAromatic
CA2CB2doub1.35Å1.36Å
CA3HA31sing1.09Å1.10Å
CA3HA32sing1.09Å1.10Å
CB2CG2sing1.47Å1.42Å
CB2HB2sing1.08Å1.08Å
CD1CE1sing1.38Å1.41ÅAromatic
CD1CG2doub1.40Å1.43ÅAromatic
CD1HD1sing1.08Å1.08Å
CD2CE2doub1.38Å1.41ÅAromatic
CD2CG2sing1.40Å1.42ÅAromatic
CD2HD2sing1.08Å1.08Å
CE1HE1sing1.08Å1.08Å
CE2HE2sing1.08Å1.08Å
OXTHXTsing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O3C3CA3121.2°120.0°
O3C3OXT117.8°120.0°
CA3C3OXT121.0°120.0°
C3CA3N3112.0°109.4°
C3CA3HA31108.6°109.5°
C3CA3HA32108.6°109.4°
C3OXTHXT109.5°117.1°
O2C2N3117.6°120.0°
O2C2CA2118.6°120.0°
N3C2CA2123.8°120.0°
C2N3CA3126.6°120.0°
C2N3HN3116.7°120.0°
C2CA2N2115.2°120.0°
C2CA2CB2123.8°120.0°
CA2N2HN2109.5°120.0°
CA2N2HN2A109.5°120.0°
N2CA2CB2121.0°120.0°
HN2N2HN2A109.5°120.0°
CA3N3HN3116.6°120.0°
N3CA3HA31108.6°109.5°
N3CA3HA32108.6°109.5°
CZOHHOH109.5°114.0°
OHCZCE1120.2°119.9°
OHCZCE2120.2°119.9°
CE1CZCE2119.6°120.2°
CZCE1CD1119.8°120.1°
CZCE1HE1120.1°120.0°
CZCE2CD2120.2°120.1°
CZCE2HE2119.9°120.0°
CA2CB2CG2132.1°120.0°
CA2CB2HB2113.9°120.0°
HA31CA3HA32110.3°109.5°
CG2CB2HB2114.0°120.0°
CB2CG2CD1117.4°120.1°
CB2CG2CD2126.3°120.1°
CE1CD1CG2122.2°119.9°
CE1CD1HD1118.9°120.0°
CD1CE1HE1120.1°119.9°
CG2CD1HD1118.9°120.1°
CD1CG2CD2116.3°119.8°
CE2CD2CG2121.8°119.9°
CE2CD2HD2119.1°120.1°
CD2CE2HE2119.9°119.9°
CG2CD2HD2119.1°120.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O3C3CA3OXT178.0°179.7°
O3C3CA3N3117.5°0.0°
O3C3CA3HA312.4°120.0°
O3C3CA3HA32122.5°120.0°
O3C3OXTHXT0.0°0.0°
C3CA3N3C2169.5°179.9°
C3CA3N3HA31120.0°120.0°
C3CA3N3HA32120.0°119.9°
C3CA3N3HN310.6°0.0°
C3CA3HA31HA32119.0°120.0°
CA3C3OXTHXT178.1°179.7°
OXTC3CA3N364.4°179.7°
OXTC3CA3HA31175.6°59.7°
OXTC3CA3HA3255.6°60.3°
O2C2N3CA2179.7°179.9°
O2C2CA2N20.2°180.0°
O2C2N3CA38.4°0.1°
O2C2N3HN3171.6°180.0°
O2C2CA2CB2179.8°0.1°
N3C2CA2N2179.4°0.1°
C2N3CA3HN3180.0°179.9°
N3C2CA2CB20.1°180.0°
C2N3CA3HA3170.6°60.1°
C2N3CA3HA3249.4°60.0°
C2CA2N2CB2179.5°179.9°
C2CA2N2HN2180.0°24.1°
C2CA2N2HN2A60.0°155.9°
CA2C2N3CA3171.9°180.0°
CA2C2N3HN38.1°0.1°
C2CA2CB2CG2179.9°172.0°
C2CA2CB2HB20.1°8.0°
CA2N2HN2HN2A120.0°179.9°
N2CA2CB2CG20.4°8.1°
N2CA2CB2HB2179.6°171.9°
HN2N2CA2CB20.5°155.9°
HN2AN2CA2CB2120.5°24.0°
N3CA3HA31HA32118.9°120.1°
HN3N3CA3HA31109.4°120.0°
HN3N3CA3HA32130.6°119.9°
OHCZCE1CE2180.0°179.7°
OHCZCE1CD1180.0°180.0°
OHCZCE2CD2179.9°180.0°
OHCZCE1HE10.0°0.0°
OHCZCE2HE20.0°0.0°
HOHOHCZCE1180.0°90.1°
HOHOHCZCE20.0°90.2°
CZCE1CD1HE1180.0°179.9°
CZCE1CD1CG20.2°0.1°
CZCE1CD1HD1179.8°179.9°
CE1CZCE2CD20.1°0.4°
CE1CZCE2HE2179.9°179.7°
CE2CZCE1CD10.0°0.4°
CZCE2CD2HE2180.0°180.0°
CZCE2CD2CG20.0°0.0°
CZCE2CD2HD2180.0°180.0°
CE2CZCE1HE1180.0°179.7°
CA2CB2CG2HB2180.0°180.0°
CA2CB2CG2CD1178.6°155.7°
CA2CB2CG2CD21.0°24.5°
CB2CG2CD1CE1179.9°180.0°
CB2CG2CD1CD2179.6°179.8°
CB2CG2CD1HD10.2°0.0°
CB2CG2CD2CE2179.7°180.0°
CB2CG2CD2HD20.3°0.0°
HB2CB2CG2CD11.4°24.3°
HB2CB2CG2CD2179.0°155.5°
CE1CD1CG2HD1180.0°180.0°
CE1CD1CG2CD20.2°0.2°
CD1CG2CD2CE20.1°0.2°
CD1CG2CD2HD2179.8°179.7°
CG2CD1CE1HE1179.8°180.0°
HD1CD1CG2CD2179.8°179.8°
HD1CD1CE1HE10.2°0.0°
CE2CD2CG2HD2180.0°180.0°
CG2CD2CE2HE2180.0°180.0°
HD2CD2CE2HE20.0°0.0°

222415

PDB entries from 2024-07-10

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