0YG
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
C3 | O3 | doub | 1.21Å | 1.22Å | |
C3 | CA3 | sing | 1.51Å | 1.45Å | |
C3 | OXT | sing | 1.34Å | 1.23Å | |
C2 | O2 | doub | 1.22Å | 1.23Å | |
C2 | N3 | sing | 1.35Å | 1.32Å | |
C2 | CA2 | sing | 1.47Å | 1.39Å | |
N2 | CA2 | sing | 1.40Å | 1.38Å | |
N2 | HN2 | sing | 0.97Å | 1.00Å | |
N2 | HN2A | sing | 0.97Å | 1.00Å | |
N3 | CA3 | sing | 1.47Å | 1.40Å | |
N3 | HN3 | sing | 0.97Å | 1.00Å | |
OH | CZ | sing | 1.36Å | 1.25Å | |
OH | HOH | sing | 0.97Å | 0.95Å | |
CZ | CE1 | doub | 1.39Å | 1.40Å | Aromatic |
CZ | CE2 | sing | 1.39Å | 1.40Å | Aromatic |
CA2 | CB2 | doub | 1.35Å | 1.36Å | |
CA3 | HA31 | sing | 1.09Å | 1.10Å | |
CA3 | HA32 | sing | 1.09Å | 1.10Å | |
CB2 | CG2 | sing | 1.47Å | 1.42Å | |
CB2 | HB2 | sing | 1.08Å | 1.08Å | |
CD1 | CE1 | sing | 1.38Å | 1.41Å | Aromatic |
CD1 | CG2 | doub | 1.40Å | 1.43Å | Aromatic |
CD1 | HD1 | sing | 1.08Å | 1.08Å | |
CD2 | CE2 | doub | 1.38Å | 1.41Å | Aromatic |
CD2 | CG2 | sing | 1.40Å | 1.42Å | Aromatic |
CD2 | HD2 | sing | 1.08Å | 1.08Å | |
CE1 | HE1 | sing | 1.08Å | 1.08Å | |
CE2 | HE2 | sing | 1.08Å | 1.08Å | |
OXT | HXT | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
O3 | C3 | CA3 | 121.2° | 120.0° |
O3 | C3 | OXT | 117.8° | 120.0° |
CA3 | C3 | OXT | 121.0° | 120.0° |
C3 | CA3 | N3 | 112.0° | 109.4° |
C3 | CA3 | HA31 | 108.6° | 109.5° |
C3 | CA3 | HA32 | 108.6° | 109.4° |
C3 | OXT | HXT | 109.5° | 117.1° |
O2 | C2 | N3 | 117.6° | 120.0° |
O2 | C2 | CA2 | 118.6° | 120.0° |
N3 | C2 | CA2 | 123.8° | 120.0° |
C2 | N3 | CA3 | 126.6° | 120.0° |
C2 | N3 | HN3 | 116.7° | 120.0° |
C2 | CA2 | N2 | 115.2° | 120.0° |
C2 | CA2 | CB2 | 123.8° | 120.0° |
CA2 | N2 | HN2 | 109.5° | 120.0° |
CA2 | N2 | HN2A | 109.5° | 120.0° |
N2 | CA2 | CB2 | 121.0° | 120.0° |
HN2 | N2 | HN2A | 109.5° | 120.0° |
CA3 | N3 | HN3 | 116.6° | 120.0° |
N3 | CA3 | HA31 | 108.6° | 109.5° |
N3 | CA3 | HA32 | 108.6° | 109.5° |
CZ | OH | HOH | 109.5° | 114.0° |
OH | CZ | CE1 | 120.2° | 119.9° |
OH | CZ | CE2 | 120.2° | 119.9° |
CE1 | CZ | CE2 | 119.6° | 120.2° |
CZ | CE1 | CD1 | 119.8° | 120.1° |
CZ | CE1 | HE1 | 120.1° | 120.0° |
CZ | CE2 | CD2 | 120.2° | 120.1° |
CZ | CE2 | HE2 | 119.9° | 120.0° |
CA2 | CB2 | CG2 | 132.1° | 120.0° |
CA2 | CB2 | HB2 | 113.9° | 120.0° |
HA31 | CA3 | HA32 | 110.3° | 109.5° |
CG2 | CB2 | HB2 | 114.0° | 120.0° |
CB2 | CG2 | CD1 | 117.4° | 120.1° |
CB2 | CG2 | CD2 | 126.3° | 120.1° |
CE1 | CD1 | CG2 | 122.2° | 119.9° |
CE1 | CD1 | HD1 | 118.9° | 120.0° |
CD1 | CE1 | HE1 | 120.1° | 119.9° |
CG2 | CD1 | HD1 | 118.9° | 120.1° |
CD1 | CG2 | CD2 | 116.3° | 119.8° |
CE2 | CD2 | CG2 | 121.8° | 119.9° |
CE2 | CD2 | HD2 | 119.1° | 120.1° |
CD2 | CE2 | HE2 | 119.9° | 119.9° |
CG2 | CD2 | HD2 | 119.1° | 120.0° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
O3 | C3 | CA3 | OXT | 178.0° | 179.7° |
O3 | C3 | CA3 | N3 | 117.5° | 0.0° |
O3 | C3 | CA3 | HA31 | 2.4° | 120.0° |
O3 | C3 | CA3 | HA32 | 122.5° | 120.0° |
O3 | C3 | OXT | HXT | 0.0° | 0.0° |
C3 | CA3 | N3 | C2 | 169.5° | 179.9° |
C3 | CA3 | N3 | HA31 | 120.0° | 120.0° |
C3 | CA3 | N3 | HA32 | 120.0° | 119.9° |
C3 | CA3 | N3 | HN3 | 10.6° | 0.0° |
C3 | CA3 | HA31 | HA32 | 119.0° | 120.0° |
CA3 | C3 | OXT | HXT | 178.1° | 179.7° |
OXT | C3 | CA3 | N3 | 64.4° | 179.7° |
OXT | C3 | CA3 | HA31 | 175.6° | 59.7° |
OXT | C3 | CA3 | HA32 | 55.6° | 60.3° |
O2 | C2 | N3 | CA2 | 179.7° | 179.9° |
O2 | C2 | CA2 | N2 | 0.2° | 180.0° |
O2 | C2 | N3 | CA3 | 8.4° | 0.1° |
O2 | C2 | N3 | HN3 | 171.6° | 180.0° |
O2 | C2 | CA2 | CB2 | 179.8° | 0.1° |
N3 | C2 | CA2 | N2 | 179.4° | 0.1° |
C2 | N3 | CA3 | HN3 | 180.0° | 179.9° |
N3 | C2 | CA2 | CB2 | 0.1° | 180.0° |
C2 | N3 | CA3 | HA31 | 70.6° | 60.1° |
C2 | N3 | CA3 | HA32 | 49.4° | 60.0° |
C2 | CA2 | N2 | CB2 | 179.5° | 179.9° |
C2 | CA2 | N2 | HN2 | 180.0° | 24.1° |
C2 | CA2 | N2 | HN2A | 60.0° | 155.9° |
CA2 | C2 | N3 | CA3 | 171.9° | 180.0° |
CA2 | C2 | N3 | HN3 | 8.1° | 0.1° |
C2 | CA2 | CB2 | CG2 | 179.9° | 172.0° |
C2 | CA2 | CB2 | HB2 | 0.1° | 8.0° |
CA2 | N2 | HN2 | HN2A | 120.0° | 179.9° |
N2 | CA2 | CB2 | CG2 | 0.4° | 8.1° |
N2 | CA2 | CB2 | HB2 | 179.6° | 171.9° |
HN2 | N2 | CA2 | CB2 | 0.5° | 155.9° |
HN2A | N2 | CA2 | CB2 | 120.5° | 24.0° |
N3 | CA3 | HA31 | HA32 | 118.9° | 120.1° |
HN3 | N3 | CA3 | HA31 | 109.4° | 120.0° |
HN3 | N3 | CA3 | HA32 | 130.6° | 119.9° |
OH | CZ | CE1 | CE2 | 180.0° | 179.7° |
OH | CZ | CE1 | CD1 | 180.0° | 180.0° |
OH | CZ | CE2 | CD2 | 179.9° | 180.0° |
OH | CZ | CE1 | HE1 | 0.0° | 0.0° |
OH | CZ | CE2 | HE2 | 0.0° | 0.0° |
HOH | OH | CZ | CE1 | 180.0° | 90.1° |
HOH | OH | CZ | CE2 | 0.0° | 90.2° |
CZ | CE1 | CD1 | HE1 | 180.0° | 179.9° |
CZ | CE1 | CD1 | CG2 | 0.2° | 0.1° |
CZ | CE1 | CD1 | HD1 | 179.8° | 179.9° |
CE1 | CZ | CE2 | CD2 | 0.1° | 0.4° |
CE1 | CZ | CE2 | HE2 | 179.9° | 179.7° |
CE2 | CZ | CE1 | CD1 | 0.0° | 0.4° |
CZ | CE2 | CD2 | HE2 | 180.0° | 180.0° |
CZ | CE2 | CD2 | CG2 | 0.0° | 0.0° |
CZ | CE2 | CD2 | HD2 | 180.0° | 180.0° |
CE2 | CZ | CE1 | HE1 | 180.0° | 179.7° |
CA2 | CB2 | CG2 | HB2 | 180.0° | 180.0° |
CA2 | CB2 | CG2 | CD1 | 178.6° | 155.7° |
CA2 | CB2 | CG2 | CD2 | 1.0° | 24.5° |
CB2 | CG2 | CD1 | CE1 | 179.9° | 180.0° |
CB2 | CG2 | CD1 | CD2 | 179.6° | 179.8° |
CB2 | CG2 | CD1 | HD1 | 0.2° | 0.0° |
CB2 | CG2 | CD2 | CE2 | 179.7° | 180.0° |
CB2 | CG2 | CD2 | HD2 | 0.3° | 0.0° |
HB2 | CB2 | CG2 | CD1 | 1.4° | 24.3° |
HB2 | CB2 | CG2 | CD2 | 179.0° | 155.5° |
CE1 | CD1 | CG2 | HD1 | 180.0° | 180.0° |
CE1 | CD1 | CG2 | CD2 | 0.2° | 0.2° |
CD1 | CG2 | CD2 | CE2 | 0.1° | 0.2° |
CD1 | CG2 | CD2 | HD2 | 179.8° | 179.7° |
CG2 | CD1 | CE1 | HE1 | 179.8° | 180.0° |
HD1 | CD1 | CG2 | CD2 | 179.8° | 179.8° |
HD1 | CD1 | CE1 | HE1 | 0.2° | 0.0° |
CE2 | CD2 | CG2 | HD2 | 180.0° | 180.0° |
CG2 | CD2 | CE2 | HE2 | 180.0° | 180.0° |
HD2 | CD2 | CE2 | HE2 | 0.0° | 0.0° |