0VR
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| O72 | C7 | doub | 1.22Å | 1.26Å | |
| C7 | O71 | sing | 1.35Å | 1.26Å | |
| C7 | C1 | sing | 1.47Å | 1.50Å | |
| C1 | C6 | doub | 1.40Å | 1.19Å | Aromatic |
| C1 | C2 | sing | 1.40Å | 1.23Å | Aromatic |
| C6 | C5 | sing | 1.38Å | 1.34Å | Aromatic |
| NH | C2 | sing | 1.39Å | 1.46Å | |
| NH | C1' | sing | 1.46Å | 1.47Å | |
| C2 | C3 | doub | 1.39Å | 1.36Å | Aromatic |
| C1' | C2' | sing | 1.53Å | 1.50Å | |
| C2' | O2' | sing | 1.43Å | 1.37Å | |
| C2' | C3' | sing | 1.53Å | 1.52Å | |
| C5 | C4 | doub | 1.39Å | 1.58Å | Aromatic |
| O3' | C3' | sing | 1.43Å | 1.38Å | |
| C3 | C4 | sing | 1.38Å | 1.60Å | Aromatic |
| C3' | C4' | sing | 1.53Å | 1.52Å | |
| C4' | O4' | sing | 1.43Å | 1.38Å | |
| C4' | C5' | sing | 1.53Å | 1.53Å | |
| C5' | O5' | sing | 1.43Å | 1.40Å | |
| O5' | P | sing | 1.61Å | 1.57Å | |
| O1P | P | doub | 1.48Å | 1.51Å | |
| P | O3P | sing | 1.61Å | 1.52Å | |
| P | O2P | sing | 1.61Å | 1.52Å | |
| O2P | H1 | sing | 0.97Å | 0.95Å | |
| O3P | H2 | sing | 0.97Å | 0.95Å | |
| C5' | H3 | sing | 1.09Å | 1.10Å | |
| C5' | H4 | sing | 1.09Å | 1.10Å | |
| C4' | H5 | sing | 1.09Å | 1.10Å | |
| O4' | H6 | sing | 0.97Å | 0.95Å | |
| C3' | H7 | sing | 1.09Å | 1.10Å | |
| O3' | H8 | sing | 0.97Å | 0.95Å | |
| C2' | H9 | sing | 1.09Å | 1.10Å | |
| O2' | H10 | sing | 0.97Å | 0.95Å | |
| C1' | H11 | sing | 1.09Å | 1.10Å | |
| C1' | H12 | sing | 1.09Å | 1.10Å | |
| NH | H13 | sing | 0.97Å | 1.00Å | |
| C3 | H14 | sing | 1.08Å | 1.08Å | |
| C4 | H15 | sing | 1.08Å | 1.08Å | |
| C5 | H16 | sing | 1.08Å | 1.08Å | |
| C6 | H17 | sing | 1.08Å | 1.08Å | |
| O71 | H18 | sing | 0.97Å | 0.95Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| O72 | C7 | O71 | 134.6° | 120.0° |
| O72 | C7 | C1 | 112.2° | 120.0° |
| O71 | C7 | C1 | 113.2° | 120.0° |
| C7 | O71 | H18 | 109.5° | 117.0° |
| C7 | C1 | C6 | 113.9° | 120.2° |
| C7 | C1 | C2 | 120.4° | 120.3° |
| C6 | C1 | C2 | 125.7° | 119.5° |
| C1 | C6 | C5 | 123.2° | 119.9° |
| C1 | C6 | H17 | 118.4° | 120.1° |
| C1 | C2 | NH | 116.5° | 120.2° |
| C1 | C2 | C3 | 131.6° | 119.7° |
| C6 | C5 | C4 | 118.3° | 120.3° |
| C6 | C5 | H16 | 120.8° | 119.8° |
| C5 | C6 | H17 | 118.4° | 120.0° |
| C2 | NH | C1' | 121.5° | 120.0° |
| NH | C2 | C3 | 111.9° | 120.2° |
| C2 | NH | H13 | 106.4° | 120.0° |
| NH | C1' | C2' | 108.7° | 109.5° |
| NH | C1' | H11 | 109.7° | 109.5° |
| NH | C1' | H12 | 109.7° | 109.5° |
| C1' | NH | H13 | 106.4° | 120.0° |
| C2 | C3 | C4 | 109.2° | 120.0° |
| C2 | C3 | H14 | 125.4° | 120.0° |
| C1' | C2' | O2' | 107.0° | 109.5° |
| C1' | C2' | C3' | 112.0° | 109.5° |
| C1' | C2' | H9 | 107.5° | 109.4° |
| C2' | C1' | H11 | 109.7° | 109.4° |
| C2' | C1' | H12 | 109.7° | 109.5° |
| O2' | C2' | C3' | 113.5° | 109.5° |
| O2' | C2' | H9 | 109.2° | 109.5° |
| C2' | O2' | H10 | 109.5° | 114.0° |
| C2' | C3' | O3' | 106.9° | 109.5° |
| C2' | C3' | C4' | 115.2° | 109.4° |
| C2' | C3' | H7 | 108.5° | 109.5° |
| C3' | C2' | H9 | 107.4° | 109.5° |
| C5 | C4 | C3 | 112.0° | 120.5° |
| C5 | C4 | H15 | 124.0° | 119.8° |
| C4 | C5 | H16 | 120.9° | 119.8° |
| O3' | C3' | C4' | 107.3° | 109.5° |
| O3' | C3' | H7 | 110.4° | 109.5° |
| C3' | O3' | H8 | 109.5° | 114.0° |
| C4 | C3 | H14 | 125.4° | 120.0° |
| C3 | C4 | H15 | 124.0° | 119.8° |
| C3' | C4' | O4' | 111.4° | 109.5° |
| C3' | C4' | C5' | 112.9° | 109.4° |
| C3' | C4' | H5 | 107.3° | 109.5° |
| C4' | C3' | H7 | 108.4° | 109.5° |
| O4' | C4' | C5' | 108.8° | 109.5° |
| O4' | C4' | H5 | 109.2° | 109.5° |
| C4' | O4' | H6 | 109.5° | 114.0° |
| C4' | C5' | O5' | 110.5° | 109.5° |
| C4' | C5' | H3 | 109.2° | 109.5° |
| C4' | C5' | H4 | 109.2° | 109.4° |
| C5' | C4' | H5 | 107.2° | 109.5° |
| C5' | O5' | P | 121.7° | 123.0° |
| O5' | C5' | H3 | 109.2° | 109.5° |
| O5' | C5' | H4 | 109.2° | 109.5° |
| O5' | P | O1P | 112.1° | 109.5° |
| O5' | P | O3P | 112.4° | 109.5° |
| O5' | P | O2P | 106.1° | 109.5° |
| O1P | P | O3P | 105.3° | 109.5° |
| O1P | P | O2P | 111.1° | 109.4° |
| O3P | P | O2P | 110.1° | 109.4° |
| P | O3P | H2 | 109.5° | 114.0° |
| P | O2P | H1 | 109.5° | 114.0° |
| H3 | C5' | H4 | 109.5° | 109.5° |
| H11 | C1' | H12 | 109.5° | 109.4° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| O72 | C7 | O71 | C1 | 178.7° | 179.9° |
| O72 | C7 | C1 | C6 | 49.0° | 174.1° |
| O72 | C7 | C1 | C2 | 130.9° | 6.2° |
| O72 | C7 | O71 | H18 | 0.0° | 0.1° |
| O71 | C7 | C1 | C6 | 130.0° | 5.8° |
| O71 | C7 | C1 | C2 | 50.1° | 173.9° |
| C7 | C1 | C6 | C2 | 179.9° | 179.7° |
| C7 | C1 | C6 | C5 | 179.9° | 179.7° |
| C7 | C1 | C2 | NH | 0.2° | 0.3° |
| C7 | C1 | C2 | C3 | 179.8° | 179.7° |
| C7 | C1 | C6 | H17 | 0.0° | 0.3° |
| C1 | C7 | O71 | H18 | 178.7° | 180.0° |
| C1 | C6 | C5 | H17 | 180.0° | 180.0° |
| C6 | C1 | C2 | NH | 179.9° | 180.0° |
| C6 | C1 | C2 | C3 | 0.3° | 0.0° |
| C1 | C6 | C5 | C4 | 0.2° | 0.0° |
| C1 | C6 | C5 | H16 | 179.9° | 180.0° |
| C2 | C1 | C6 | C5 | 0.0° | 0.0° |
| C1 | C2 | NH | C3 | 179.7° | 180.0° |
| C1 | C2 | NH | C1' | 179.8° | 174.4° |
| C1 | C2 | C3 | C4 | 0.2° | 0.1° |
| C1 | C2 | NH | H13 | 58.6° | 5.7° |
| C1 | C2 | C3 | H14 | 179.8° | 179.9° |
| C2 | C1 | C6 | H17 | 179.9° | 180.0° |
| C6 | C5 | C4 | H16 | 180.0° | 180.0° |
| C6 | C5 | C4 | C3 | 0.2° | 0.0° |
| C6 | C5 | C4 | H15 | 179.8° | 179.9° |
| C2 | NH | C1' | H13 | 121.7° | 179.9° |
| C2 | NH | C1' | C2' | 131.6° | 180.0° |
| NH | C2 | C3 | C4 | 179.9° | 180.0° |
| C2 | NH | C1' | H11 | 108.5° | 60.0° |
| C2 | NH | C1' | H12 | 11.7° | 60.0° |
| NH | C2 | C3 | H14 | 0.2° | 0.1° |
| C1' | NH | C2 | C3 | 0.5° | 5.6° |
| NH | C1' | C2' | H11 | 119.9° | 120.0° |
| NH | C1' | C2' | H12 | 119.9° | 120.1° |
| NH | C1' | C2' | O2' | 38.9° | 60.0° |
| NH | C1' | C2' | C3' | 163.9° | 180.0° |
| NH | C1' | C2' | H9 | 78.4° | 60.0° |
| NH | C1' | H11 | H12 | 120.3° | 120.0° |
| C2 | C3 | C4 | C5 | 0.0° | 0.0° |
| C2 | C3 | C4 | H14 | 180.0° | 179.9° |
| C3 | C2 | NH | H13 | 121.1° | 174.3° |
| C2 | C3 | C4 | H15 | 180.0° | 180.0° |
| C1' | C2' | O2' | C3' | 124.1° | 120.0° |
| C1' | C2' | O2' | H9 | 116.1° | 119.9° |
| C1' | C2' | C3' | H9 | 117.8° | 120.0° |
| C1' | C2' | C3' | O3' | 104.8° | 60.0° |
| C1' | C2' | C3' | C4' | 136.0° | 180.0° |
| C1' | C2' | C3' | H7 | 14.3° | 60.0° |
| C1' | C2' | O2' | H10 | 180.0° | 60.0° |
| C2' | C1' | H11 | H12 | 120.4° | 120.0° |
| C2' | C1' | NH | H13 | 9.9° | 0.0° |
| O2' | C2' | C3' | H9 | 120.9° | 120.0° |
| O2' | C2' | C3' | O3' | 133.8° | 180.0° |
| O2' | C2' | C3' | C4' | 14.7° | 60.0° |
| O2' | C2' | C3' | H7 | 107.1° | 60.0° |
| O2' | C2' | C1' | H11 | 158.8° | 60.0° |
| O2' | C2' | C1' | H12 | 81.0° | 180.0° |
| C2' | C3' | O3' | C4' | 124.2° | 120.0° |
| C2' | C3' | O3' | H7 | 117.9° | 120.0° |
| C2' | C3' | C4' | H7 | 121.8° | 120.0° |
| C2' | C3' | C4' | O4' | 68.1° | 60.0° |
| C2' | C3' | C4' | C5' | 169.2° | 180.0° |
| C2' | C3' | C4' | H5 | 51.3° | 60.0° |
| C2' | C3' | O3' | H8 | 180.0° | 60.0° |
| C3' | C2' | O2' | H10 | 56.0° | 60.0° |
| C3' | C2' | C1' | H11 | 76.2° | 60.0° |
| C3' | C2' | C1' | H12 | 44.0° | 59.9° |
| C5 | C4 | C3 | H15 | 180.0° | 179.9° |
| C5 | C4 | C3 | H14 | 180.0° | 179.9° |
| C4 | C5 | C6 | H17 | 179.9° | 180.0° |
| O3' | C3' | C4' | H7 | 119.3° | 120.0° |
| O3' | C3' | C4' | O4' | 173.0° | 180.0° |
| O3' | C3' | C4' | C5' | 50.3° | 60.0° |
| O3' | C3' | C4' | H5 | 67.6° | 60.0° |
| O3' | C3' | C2' | H9 | 13.0° | 60.0° |
| C3 | C4 | C5 | H16 | 179.9° | 179.9° |
| C3' | C4' | O4' | C5' | 125.0° | 120.0° |
| C3' | C4' | O4' | H5 | 118.3° | 120.1° |
| C3' | C4' | C5' | H5 | 117.9° | 120.0° |
| C3' | C4' | C5' | O5' | 56.9° | 175.0° |
| C3' | C4' | C5' | H3 | 177.0° | 65.0° |
| C3' | C4' | C5' | H4 | 63.3° | 55.0° |
| C3' | C4' | O4' | H6 | 180.0° | 60.0° |
| C4' | C3' | O3' | H8 | 55.8° | 60.0° |
| C4' | C3' | C2' | H9 | 106.2° | 60.0° |
| O4' | C4' | C5' | H5 | 117.9° | 120.0° |
| O4' | C4' | C5' | O5' | 67.3° | 65.0° |
| O4' | C4' | C5' | H3 | 52.9° | 55.0° |
| O4' | C4' | C5' | H4 | 172.6° | 175.0° |
| O4' | C4' | C3' | H7 | 53.7° | 60.0° |
| C4' | C5' | O5' | H3 | 120.1° | 120.0° |
| C4' | C5' | O5' | H4 | 120.1° | 120.0° |
| C4' | C5' | O5' | P | 179.4° | 180.0° |
| C4' | C5' | H3 | H4 | 119.5° | 120.0° |
| C5' | C4' | O4' | H6 | 55.0° | 60.0° |
| C5' | C4' | C3' | H7 | 69.0° | 60.0° |
| C5' | O5' | P | O1P | 106.7° | 55.0° |
| C5' | O5' | P | O3P | 11.6° | 65.0° |
| C5' | O5' | P | O2P | 131.9° | 175.0° |
| O5' | C5' | H3 | H4 | 119.6° | 120.0° |
| O5' | C5' | C4' | H5 | 174.8° | 55.0° |
| O5' | P | O1P | O3P | 122.4° | 120.1° |
| O5' | P | O1P | O2P | 118.5° | 120.0° |
| O5' | P | O3P | O2P | 118.0° | 120.0° |
| O5' | P | O2P | H1 | 122.0° | 180.0° |
| O5' | P | O3P | H2 | 122.2° | 59.9° |
| P | O5' | C5' | H3 | 60.5° | 60.0° |
| P | O5' | C5' | H4 | 59.3° | 60.0° |
| O1P | P | O3P | O2P | 119.8° | 119.9° |
| O1P | P | O2P | H1 | 0.0° | 60.0° |
| O1P | P | O3P | H2 | 0.0° | 180.0° |
| O3P | P | O2P | H1 | 116.2° | 60.0° |
| O2P | P | O3P | H2 | 119.8° | 60.1° |
| H3 | C5' | C4' | H5 | 65.1° | 175.0° |
| H4 | C5' | C4' | H5 | 54.6° | 65.0° |
| H5 | C4' | O4' | H6 | 61.8° | 180.0° |
| H5 | C4' | C3' | H7 | 173.1° | 180.0° |
| H7 | C3' | O3' | H8 | 62.2° | 180.0° |
| H7 | C3' | C2' | H9 | 132.1° | 180.0° |
| H9 | C2' | O2' | H10 | 63.8° | 180.0° |
| H9 | C2' | C1' | H11 | 41.5° | 180.0° |
| H9 | C2' | C1' | H12 | 161.8° | 60.1° |
| H11 | C1' | NH | H13 | 129.8° | 120.0° |
| H12 | C1' | NH | H13 | 110.0° | 120.1° |
| H14 | C3 | C4 | H15 | 0.0° | 0.1° |
| H15 | C4 | C5 | H16 | 0.1° | 0.0° |
| H16 | C5 | C6 | H17 | 0.1° | 0.1° |
