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Obsolete: 0SP

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
POXTsing1.61Å1.61Å
OXTHOXTsing0.97Å0.95Å
OP2Pdoub1.48Å1.48Å
O5'Psing1.61Å1.59Å
POP1sing1.61Å1.47Å
OP1HOP1sing0.97Å0.95Å
O5'C5'sing1.43Å1.40Å
C4'C5'sing1.53Å1.50Å
C5'H5'sing1.09Å1.10Å
C5'H5'Asing1.09Å1.10Å
C3'C4'sing1.55Å1.53Å
O4'C4'sing1.44Å1.45Å
C4'H4'sing1.09Å1.10Å
C1'O4'sing1.44Å1.42Å
C2'C3'sing1.55Å1.53Å
O3'C3'sing1.43Å1.42Å
C3'H3'sing1.09Å1.10Å
O3'HO3'sing0.97Å0.95Å
C2'C1'sing1.54Å1.53Å
C2'H2'sing1.09Å1.10Å
C2'H2'Asing1.09Å1.10Å
N9C1'sing1.46Å1.47Å
C1'H1'sing1.09Å1.10Å
C4N9sing1.37Å1.38ÅAromatic
N9C8sing1.36Å1.37Å
N7C8doub1.30Å1.31ÅAromatic
C8H8sing1.08Å1.08ÅAromatic
C5N7sing1.35Å1.40ÅAromatic
C6C5sing1.41Å1.41ÅAromatic
C5C4doub1.41Å1.38Å
N6C6sing1.38Å1.33Å
N1C6doub1.33Å1.35Å
N6CA1sing1.47Å1.45ÅAromatic
N6HN6sing0.97Å1.00ÅAromatic
N1C2sing1.32Å1.33ÅAromatic
C2N3doub1.32Å1.34Å
C2H2sing1.08Å1.08ÅAromatic
N3C4sing1.33Å1.34ÅAromatic
S2S1sing2.05Å2.03Å
S1CG1sing1.81Å1.81Å
CG2S2sing1.81Å1.82Å
CB1CA1sing1.53Å1.53Å
CA1HA1sing1.09Å1.10Å
CA1HA1Asing1.09Å1.10Å
CB1CG1sing1.53Å1.52Å
CB1HB1sing1.09Å1.10Å
CB1HB1Asing1.09Å1.10Å
CG1HG1sing1.09Å1.10Å
CG1HG1Asing1.09Å1.10Å
CA2CB2sing1.53Å1.51Å
CA2HA2sing1.09Å1.10Å
CA2HA2Asing1.09Å1.10Å
CA2HA2Bsing1.09Å1.10Å
CG2CB2sing1.53Å1.52Å
CB2HB2sing1.09Å1.10Å
CB2HB2Asing1.09Å1.10Å
CG2HG2sing1.09Å1.10Å
CG2HG2Asing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
POXTHOXT109.5°114.0°
OXTPOP2112.8°109.5°
OXTPO5'103.3°109.5°
OXTPOP1106.1°109.5°
OP2PO5'108.4°109.5°
OP2POP1120.8°109.5°
O5'POP1103.7°109.4°
PO5'C5'120.1°123.0°
POP1HOP1109.5°114.0°
O5'C5'C4'109.1°109.4°
O5'C5'H5'109.6°109.5°
O5'C5'H5'A109.7°109.4°
C4'C5'H5'109.6°109.5°
C4'C5'H5'A109.7°109.5°
C5'C4'C3'113.6°110.6°
C5'C4'O4'108.3°110.6°
C5'C4'H4'106.6°110.6°
H5'C5'H5'A109.1°109.5°
C3'C4'O4'106.7°103.6°
C3'C4'H4'108.2°110.6°
C4'C3'C2'104.0°102.1°
C4'C3'O3'106.1°110.9°
C4'C3'H3'117.0°110.9°
O4'C4'H4'113.6°110.6°
C4'O4'C1'110.2°107.0°
O4'C1'C2'104.0°107.3°
O4'C1'N9107.1°109.9°
O4'C1'H1'116.7°109.8°
C2'C3'O3'114.8°110.9°
C2'C3'H3'108.6°110.9°
C3'C2'C1'103.6°104.1°
C3'C2'H2'111.5°110.5°
C3'C2'H2'A112.7°110.5°
O3'C3'H3'106.6°110.8°
C3'O3'HO3'109.5°114.1°
C1'C2'H2'111.5°110.5°
C1'C2'H2'A112.7°110.5°
C2'C1'N9115.6°109.9°
C2'C1'H1'108.5°109.8°
H2'C2'H2'A105.0°110.5°
N9C1'H1'105.4°110.0°
C1'N9C4127.8°126.3°
C1'N9C8126.6°126.3°
C4N9C8105.6°107.5°
N9C4C5105.7°106.0°
N9C4N3127.3°134.9°
N9C8N7114.4°110.0°
N9C8H8122.8°125.0°
N7C8H8122.8°125.1°
C8N7C5103.6°109.5°
N7C5C6132.3°134.7°
N7C5C4110.7°107.1°
C6C5C4117.0°118.2°
C5C6N6124.2°120.8°
C5C6N1117.2°118.4°
C5C4N3127.0°119.1°
N6C6N1118.5°120.8°
C6N6CA1128.3°120.0°
C6N6HN6103.6°120.0°
C6N1C2118.9°121.2°
CA1N6HN6103.6°120.0°
N6CA1CB1124.4°109.5°
N6CA1HA1104.8°109.4°
N6CA1HA1A101.3°109.4°
N1C2N3129.6°122.5°
N1C2H2115.2°118.8°
N3C2H2115.2°118.7°
C2N3C4110.3°120.6°
S2S1CG1118.5°103.0°
S1S2CG2119.0°103.0°
S1CG1CB1106.5°109.5°
S1CG1HG1110.5°109.4°
S1CG1HG1A111.1°109.5°
S2CG2CB2108.9°109.4°
S2CG2HG2109.6°109.5°
S2CG2HG2A109.8°109.5°
CB1CA1HA1104.8°109.5°
CB1CA1HA1A101.3°109.5°
CA1CB1CG1106.9°109.5°
CA1CB1HB1110.3°109.5°
CA1CB1HB1A110.9°109.5°
HA1CA1HA1A122.1°109.5°
CG1CB1HB1110.4°109.5°
CG1CB1HB1A110.9°109.5°
CB1CG1HG1110.5°109.5°
CB1CG1HG1A111.1°109.5°
HB1CB1HB1A107.5°109.4°
HG1CG1HG1A107.2°109.5°
CB2CA2HA2109.5°109.4°
CB2CA2HA2A109.5°109.4°
CB2CA2HA2B109.5°109.4°
CA2CB2CG2104.0°109.5°
CA2CB2HB2111.4°109.5°
CA2CB2HB2A112.5°109.5°
HA2CA2HA2A109.4°109.5°
HA2CA2HA2B109.4°109.5°
HA2ACA2HA2B109.5°109.5°
CG2CB2HB2111.4°109.5°
CG2CB2HB2A112.5°109.4°
CB2CG2HG2109.7°109.4°
CB2CG2HG2A109.7°109.5°
HB2CB2HB2A105.3°109.5°
HG2CG2HG2A109.1°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
OXTPOP2O5'113.8°120.0°
OXTPOP2OP1127.0°120.0°
OXTPO5'OP1110.5°120.0°
OXTPOP1HOP120.2°60.0°
OXTPO5'C5'69.2°65.0°
HOXTOXTPOP220.2°179.9°
HOXTOXTPO5'96.6°59.9°
HOXTOXTPOP1154.7°60.0°
OP2PO5'OP1129.5°120.0°
OP2POP1HOP1109.7°60.0°
OP2PO5'C5'170.9°55.0°
O5'POP1HOP1128.7°180.0°
PO5'C5'C4'168.7°180.0°
PO5'C5'H5'48.7°60.0°
PO5'C5'H5'A71.1°60.0°
OP1PO5'C5'41.3°175.0°
O5'C5'C4'H5'120.0°120.0°
O5'C5'C4'H5'A120.2°120.0°
O5'C5'H5'H5'A120.2°120.0°
O5'C5'C4'C3'51.0°177.2°
O5'C5'C4'O4'67.3°68.6°
O5'C5'C4'H4'170.1°54.3°
C4'C5'H5'H5'A120.1°120.1°
C5'C4'C3'O4'119.2°118.5°
C5'C4'C3'H4'118.2°122.8°
C5'C4'O4'H4'118.2°122.9°
C5'C4'O4'C1'136.9°158.5°
C5'C4'C3'C2'111.2°155.5°
C5'C4'C3'O3'127.3°86.2°
C5'C4'C3'H3'8.5°37.3°
H5'C5'C4'C3'69.0°62.8°
H5'C5'C4'O4'172.7°51.4°
H5'C5'C4'H4'50.1°174.3°
H5'AC5'C4'C3'171.2°57.2°
H5'AC5'C4'O4'52.9°171.4°
H5'AC5'C4'H4'69.7°65.7°
C3'C4'O4'H4'119.1°118.6°
C3'C4'O4'C1'14.3°40.0°
C4'C3'C2'O3'115.5°118.2°
C4'C3'C2'H3'125.3°118.2°
C4'C3'O3'H3'125.4°123.7°
C4'C3'O3'HO3'33.0°179.9°
C4'C3'C2'C1'25.2°20.9°
C4'C3'C2'H2'94.8°139.6°
C4'C3'C2'H2'A147.4°97.8°
O4'C4'C3'C2'8.0°37.0°
O4'C4'C3'O3'113.5°155.2°
O4'C4'C3'H3'127.8°81.2°
C4'O4'C1'C2'30.4°26.4°
C4'O4'C1'N9153.2°145.9°
C4'O4'C1'H1'89.0°93.0°
H4'C4'O4'C1'104.9°78.6°
H4'C4'C3'C2'130.6°81.6°
H4'C4'C3'O3'9.1°36.6°
H4'C4'C3'H3'109.7°160.2°
O4'C1'C2'C3'34.1°2.0°
O4'C1'C2'N9117.1°119.5°
O4'C1'C2'H1'124.9°119.4°
O4'C1'C2'H2'85.9°116.7°
O4'C1'C2'H2'A156.3°120.7°
O4'C1'N9H1'125.0°121.1°
O4'C1'N9C4115.1°157.5°
O4'C1'N9C864.5°22.8°
C2'C3'O3'H3'120.4°123.6°
C2'C3'O3'HO3'147.2°67.2°
C3'C2'C1'H2'120.0°118.7°
C3'C2'C1'H2'A122.2°118.7°
C3'C2'H2'H2'A122.4°122.6°
C3'C2'C1'N9151.2°121.5°
C3'C2'C1'H1'90.8°117.4°
O3'C3'C2'C1'90.3°139.1°
O3'C3'C2'H2'149.7°102.2°
O3'C3'C2'H2'A31.9°20.4°
H3'C3'O3'HO3'92.4°56.4°
H3'C3'C2'C1'150.5°97.4°
H3'C3'C2'H2'30.4°21.3°
H3'C3'C2'H2'A87.4°144.0°
C1'C2'H2'H2'A122.4°122.6°
C2'C1'N9H1'119.7°121.1°
C2'C1'N9C4129.6°84.7°
C2'C1'N9C850.8°95.0°
H2'C2'C1'N931.2°2.8°
H2'C2'C1'H1'149.2°124.0°
H2'AC2'C1'N986.7°119.9°
H2'AC2'C1'H1'31.4°1.3°
C1'N9C4C8179.7°179.7°
C1'N9C8N7179.4°180.0°
C1'N9C8H80.6°0.0°
C1'N9C4C5179.4°179.8°
C1'N9C4N30.8°0.9°
H1'C1'N9C49.8°36.4°
H1'C1'N9C8170.5°143.9°
C4N9C8N70.3°0.2°
C4N9C8H8179.7°179.7°
N9C4C5N70.2°0.5°
N9C4C5C6180.0°179.8°
N9C4C5N3179.8°179.1°
N9C4N3C2179.9°179.5°
N9C8N7H8180.0°180.0°
N9C8N7C50.2°0.1°
C8N9C4C50.3°0.4°
C8N9C4N3179.5°179.4°
C8N7C5C6179.7°180.0°
C8N7C5C40.0°0.3°
H8C8N7C5179.8°179.9°
N7C5C6C4179.8°179.6°
N7C5C6N61.1°0.0°
N7C5C6N1179.7°180.0°
N7C5C4N3179.6°179.6°
C5C6N6N1179.2°180.0°
C5C6N6CA10.5°180.0°
C5C6N6HN6119.5°0.0°
C5C6N1C20.1°0.0°
C6C5C4N30.2°0.7°
C4C5C6N6179.1°179.7°
C4C5C6N10.1°0.3°
C5C4N3C20.1°0.7°
C6N6CA1HN6120.0°180.0°
N6C6N1C2179.3°180.0°
C6N6CA1CB188.5°180.0°
C6N6CA1HA1151.4°60.0°
C6N6CA1HA1A23.7°59.9°
N1C6N6CA1178.7°0.0°
N1C6N6HN661.3°180.0°
C6N1C2N30.1°0.1°
C6N1C2H2179.9°180.0°
N6CA1CB1HA1120.0°120.0°
N6CA1CB1HA1A112.2°120.0°
N6CA1HA1HA1A113.8°119.9°
N6CA1CB1CG1179.2°180.0°
N6CA1CB1HB160.8°60.0°
N6CA1CB1HB1A58.2°60.0°
HN6N6CA1CB131.4°0.0°
HN6N6CA1HA188.6°120.0°
HN6N6CA1HA1A143.6°120.0°
N1C2N3H2180.0°179.9°
N1C2N3C40.0°0.4°
H2C2N3C4180.0°179.7°
S2S1CG1CB149.0°70.0°
S2S1CG1HG171.0°170.0°
S2S1CG1HG1A170.2°50.0°
S1S2CG2CB252.8°70.0°
S1S2CG2HG267.2°170.0°
S1S2CG2HG2A173.0°49.9°
CG1S1S2CG2102.8°85.0°
S1CG1CB1CA189.5°180.0°
S1CG1CB1HG1120.0°119.9°
S1CG1CB1HG1A121.1°120.0°
S1CG1CB1HB1150.5°60.0°
S1CG1CB1HB1A31.5°60.0°
S1CG1HG1HG1A121.2°120.0°
S2CG2CB2CA291.0°180.0°
S2CG2CB2HG2120.0°119.9°
S2CG2CB2HG2A120.2°120.0°
S2CG2CB2HB2149.0°60.0°
S2CG2CB2HB2A31.1°60.1°
S2CG2HG2HG2A120.2°120.1°
CB1CA1HA1HA1A113.8°120.1°
CA1CB1CG1HB1120.0°120.0°
CA1CB1CG1HB1A121.0°120.0°
CA1CB1HB1HB1A121.0°120.0°
CA1CB1CG1HG1150.5°60.1°
CA1CB1CG1HG1A31.7°60.0°
HA1CA1CB1CG159.2°60.0°
HA1CA1CB1HB1179.2°180.0°
HA1CA1CB1HB1A61.8°60.0°
HA1ACA1CB1CG168.6°60.0°
HA1ACA1CB1HB151.4°60.0°
HA1ACA1CB1HB1A170.4°180.0°
CG1CB1HB1HB1A121.1°120.0°
CB1CG1HG1HG1A121.2°120.0°
HB1CB1CG1HG130.5°60.0°
HB1CB1CG1HG1A88.4°NaN°
HB1ACB1CG1HG188.5°179.9°
HB1ACB1CG1HG1A152.7°60.0°
CB2CA2HA2HA2A120.0°120.0°
CB2CA2HA2HA2B120.0°120.0°
CB2CA2HA2AHA2B120.0°119.9°
CA2CB2CG2HB2120.0°120.0°
CA2CB2CG2HB2A122.1°120.0°
CA2CB2HB2HB2A122.2°120.0°
CA2CB2CG2HG2149.1°60.0°
CA2CB2CG2HG2A29.3°60.0°
HA2CA2HA2AHA2B120.0°120.1°
HA2CA2CB2CG2159.8°60.0°
HA2CA2CB2HB280.2°60.0°
HA2CA2CB2HB2A37.8°180.0°
HA2ACA2CB2CG280.2°60.0°
HA2ACA2CB2HB239.8°180.0°
HA2ACA2CB2HB2A157.7°59.9°
HA2BCA2CB2CG239.8°179.9°
HA2BCA2CB2HB2159.8°60.0°
HA2BCA2CB2HB2A82.2°60.0°
CG2CB2HB2HB2A122.2°120.0°
CB2CG2HG2HG2A120.2°120.0°
HB2CB2CG2HG229.0°60.0°
HB2CB2CG2HG2A90.7°180.0°
HB2ACB2CG2HG288.9°180.0°
HB2ACB2CG2HG2A151.3°59.9°

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PDB entries from 2024-07-17

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