0RC
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| O2 | C2 | doub | 1.22Å | 1.12Å | |
| N3 | C2 | sing | 1.33Å | 1.34Å | |
| N3 | C4 | doub | 1.33Å | 1.38Å | |
| C2 | N1 | sing | 1.35Å | 1.38Å | |
| N15 | C14 | sing | 1.47Å | 1.40Å | |
| O4' | C1' | sing | 1.44Å | 1.27Å | |
| O4' | C4' | sing | 1.44Å | 1.33Å | |
| N4 | C4 | sing | 1.38Å | 1.27Å | |
| C4 | C5 | sing | 1.41Å | 1.41Å | |
| N1 | C1' | sing | 1.46Å | 1.42Å | |
| N1 | C6 | sing | 1.36Å | 1.36Å | |
| C1' | C2' | sing | 1.54Å | 1.58Å | |
| C4' | C5' | sing | 1.53Å | 1.51Å | |
| C4' | C3' | sing | 1.54Å | 1.57Å | |
| C14 | C1B | sing | 1.53Å | 1.55Å | |
| C5 | C6 | doub | 1.35Å | 1.39Å | |
| C5' | O5' | sing | 1.43Å | 1.43Å | |
| O3' | C3' | sing | 1.43Å | 1.36Å | |
| C1B | PB | sing | 1.82Å | 1.83Å | |
| C3' | C2' | sing | 1.54Å | 1.55Å | |
| C2' | O2' | sing | 1.43Å | 1.29Å | |
| O5' | PA | sing | 1.61Å | 1.31Å | |
| O3A | PB | sing | 1.61Å | 1.56Å | |
| O3A | PA | sing | 1.61Å | 1.58Å | |
| PB | O3B | doub | 1.48Å | 1.27Å | |
| PB | O2B | sing | 1.61Å | 1.29Å | |
| PA | O1A | doub | 1.48Å | 1.57Å | |
| PA | O2A | sing | 1.61Å | 1.34Å | |
| O2B | HO2B | sing | 0.97Å | 0.95Å | |
| C1B | H1B1 | sing | 1.09Å | 1.10Å | |
| C1B | H1B2 | sing | 1.09Å | 1.10Å | |
| C14 | H141 | sing | 1.09Å | 1.10Å | |
| C14 | H142 | sing | 1.09Å | 1.10Å | |
| N15 | H151 | sing | 1.01Å | 1.00Å | |
| N15 | H152 | sing | 1.01Å | 1.00Å | |
| O2A | HO2A | sing | 0.97Å | 0.95Å | |
| C5' | H5'1 | sing | 1.09Å | 1.10Å | |
| C5' | H5'2 | sing | 1.09Å | 1.10Å | |
| C4' | H4' | sing | 1.09Å | 1.10Å | |
| C3' | H3' | sing | 1.09Å | 1.10Å | |
| O3' | HO3' | sing | 0.97Å | 0.95Å | |
| C2' | H2' | sing | 1.09Å | 1.10Å | |
| O2' | HO2' | sing | 0.97Å | 0.95Å | |
| C1' | H1' | sing | 1.09Å | 1.10Å | |
| C6 | H6 | sing | 1.08Å | 1.08Å | |
| C5 | H5 | sing | 1.08Å | 1.08Å | |
| N4 | HN41 | sing | 0.97Å | 1.00Å | |
| N4 | HN42 | sing | 0.97Å | 1.00Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| O2 | C2 | N3 | 114.9° | 119.5° |
| O2 | C2 | N1 | 126.0° | 119.5° |
| C2 | N3 | C4 | 125.2° | 120.7° |
| N3 | C2 | N1 | 119.1° | 121.1° |
| N3 | C4 | N4 | 121.1° | 120.2° |
| N3 | C4 | C5 | 116.2° | 119.6° |
| C2 | N1 | C1' | 118.9° | 119.8° |
| C2 | N1 | C6 | 118.3° | 120.3° |
| N15 | C14 | C1B | 119.2° | 109.4° |
| N15 | C14 | H141 | 106.3° | 109.5° |
| N15 | C14 | H142 | 104.1° | 109.4° |
| C14 | N15 | H151 | 109.5° | 111.0° |
| C14 | N15 | H152 | 109.5° | 111.0° |
| C1' | O4' | C4' | 109.5° | 105.3° |
| O4' | C1' | N1 | 117.3° | 110.3° |
| O4' | C1' | C2' | 114.5° | 104.8° |
| O4' | C1' | H1' | 99.8° | 110.4° |
| O4' | C4' | C5' | 108.1° | 110.4° |
| O4' | C4' | C3' | 108.9° | 104.8° |
| O4' | C4' | H4' | 116.6° | 110.5° |
| N4 | C4 | C5 | 122.7° | 120.2° |
| C4 | N4 | HN41 | 111.1° | 120.0° |
| C4 | N4 | HN42 | 124.5° | 120.0° |
| C4 | C5 | C6 | 118.1° | 119.0° |
| C4 | C5 | H5 | 121.0° | 120.5° |
| C1' | N1 | C6 | 122.9° | 119.9° |
| N1 | C1' | C2' | 110.2° | 110.4° |
| N1 | C1' | H1' | 105.2° | 110.4° |
| N1 | C6 | C5 | 123.2° | 119.3° |
| N1 | C6 | H6 | 118.4° | 120.3° |
| C1' | C2' | C3' | 96.2° | 104.1° |
| C1' | C2' | O2' | 122.2° | 110.5° |
| C1' | C2' | H2' | 114.7° | 110.6° |
| C2' | C1' | H1' | 108.7° | 110.4° |
| C5' | C4' | C3' | 122.1° | 110.4° |
| C4' | C5' | O5' | 123.4° | 109.5° |
| C4' | C5' | H5'1 | 105.0° | 109.5° |
| C4' | C5' | H5'2 | 101.8° | 109.5° |
| C5' | C4' | H4' | 101.2° | 110.4° |
| C4' | C3' | O3' | 107.3° | 110.5° |
| C4' | C3' | C2' | 99.5° | 104.1° |
| C3' | C4' | H4' | 100.2° | 110.4° |
| C4' | C3' | H3' | 120.1° | 110.6° |
| C14 | C1B | PB | 116.6° | 109.4° |
| C14 | C1B | H1B1 | 107.2° | 109.5° |
| C14 | C1B | H1B2 | 105.5° | 109.5° |
| C1B | C14 | H141 | 106.3° | 109.5° |
| C1B | C14 | H142 | 104.1° | 109.5° |
| C5 | C6 | H6 | 118.4° | 120.4° |
| C6 | C5 | H5 | 120.9° | 120.5° |
| C5' | O5' | PA | 124.1° | 123.0° |
| O5' | C5' | H5'1 | 105.1° | 109.4° |
| O5' | C5' | H5'2 | 101.8° | 109.4° |
| O3' | C3' | C2' | 117.7° | 110.5° |
| O3' | C3' | H3' | 102.9° | 110.5° |
| C3' | O3' | HO3' | 109.5° | 114.0° |
| C1B | PB | O3A | 108.8° | 109.5° |
| C1B | PB | O3B | 111.3° | 109.5° |
| C1B | PB | O2B | 106.6° | 109.5° |
| PB | C1B | H1B1 | 107.2° | 109.5° |
| PB | C1B | H1B2 | 105.5° | 109.5° |
| C3' | C2' | O2' | 119.3° | 110.5° |
| C2' | C3' | H3' | 110.3° | 110.5° |
| C3' | C2' | H2' | 117.9° | 110.5° |
| O2' | C2' | H2' | 88.6° | 110.5° |
| C2' | O2' | HO2' | 109.5° | 114.0° |
| O5' | PA | O3A | 104.5° | 109.5° |
| O5' | PA | O1A | 93.7° | 109.5° |
| O5' | PA | O2A | 126.3° | 109.4° |
| PB | O3A | PA | 135.2° | 134.0° |
| O3A | PB | O3B | 109.2° | 109.5° |
| O3A | PB | O2B | 106.4° | 109.5° |
| O3A | PA | O1A | 102.3° | 109.5° |
| O3A | PA | O2A | 110.1° | 109.5° |
| O3B | PB | O2B | 114.4° | 109.5° |
| PB | O2B | HO2B | 109.5° | 114.0° |
| O1A | PA | O2A | 116.7° | 109.4° |
| PA | O2A | HO2A | 109.5° | 114.0° |
| H1B1 | C1B | H1B2 | 115.2° | 109.5° |
| H141 | C14 | H142 | 117.5° | 109.5° |
| H151 | N15 | H152 | 109.5° | 110.9° |
| H5'1 | C5' | H5'2 | 121.2° | 109.4° |
| HN41 | N4 | HN42 | 124.4° | 120.0° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| O2 | C2 | N3 | N1 | 178.9° | 179.5° |
| O2 | C2 | N3 | C4 | 179.9° | 180.0° |
| O2 | C2 | N1 | C1' | 0.7° | 0.2° |
| O2 | C2 | N1 | C6 | 179.9° | 180.0° |
| C2 | N3 | C4 | N4 | 179.9° | 179.7° |
| C2 | N3 | C4 | C5 | 0.6° | 0.2° |
| N3 | C2 | N1 | C1' | 179.4° | 179.7° |
| N3 | C2 | N1 | C6 | 1.2° | 0.5° |
| C4 | N3 | C2 | N1 | 1.0° | 0.5° |
| N3 | C4 | N4 | C5 | 179.4° | 179.9° |
| N3 | C4 | C5 | C6 | 0.4° | 0.0° |
| N3 | C4 | C5 | H5 | 179.6° | 179.9° |
| N3 | C4 | N4 | HN41 | 180.0° | 179.9° |
| N3 | C4 | N4 | HN42 | 0.0° | 0.0° |
| C2 | N1 | C1' | O4' | 107.5° | 53.3° |
| C2 | N1 | C1' | C6 | 179.4° | 179.7° |
| C2 | N1 | C1' | C2' | 119.2° | 62.1° |
| C2 | N1 | C6 | C5 | 1.0° | 0.3° |
| C2 | N1 | C1' | H1' | 2.2° | 175.6° |
| C2 | N1 | C6 | H6 | 179.0° | 179.8° |
| N15 | C14 | C1B | H141 | 120.0° | 120.0° |
| N15 | C14 | C1B | H142 | 115.3° | 119.9° |
| N15 | C14 | C1B | PB | 179.7° | 180.0° |
| N15 | C14 | C1B | H1B1 | 59.7° | 60.0° |
| N15 | C14 | C1B | H1B2 | 63.5° | 60.0° |
| N15 | C14 | H141 | H142 | 116.0° | 120.0° |
| C14 | N15 | H151 | H152 | 120.0° | 123.9° |
| O4' | C1' | N1 | C2' | 133.3° | 115.3° |
| O4' | C1' | N1 | H1' | 109.7° | 122.3° |
| O4' | C1' | N1 | C6 | 71.9° | 126.5° |
| O4' | C1' | C2' | H1' | 110.5° | 118.8° |
| C1' | O4' | C4' | C5' | 115.6° | 159.3° |
| C1' | O4' | C4' | C3' | 18.9° | 40.5° |
| O4' | C1' | C2' | C3' | 23.4° | 24.0° |
| O4' | C1' | C2' | O2' | 153.8° | 142.7° |
| C1' | O4' | C4' | H4' | 131.3° | 78.3° |
| O4' | C1' | C2' | H2' | 101.3° | 94.7° |
| C4' | O4' | C1' | N1 | 134.7° | 159.4° |
| C4' | O4' | C1' | C2' | 3.3° | 40.6° |
| O4' | C4' | C5' | C3' | 127.3° | 115.3° |
| O4' | C4' | C5' | H4' | 123.0° | 122.4° |
| O4' | C4' | C3' | H4' | 122.8° | 118.9° |
| O4' | C4' | C5' | O5' | 92.2° | 69.7° |
| O4' | C4' | C3' | O3' | 90.4° | 142.7° |
| O4' | C4' | C3' | C2' | 32.7° | 24.0° |
| O4' | C4' | C5' | H5'1 | 27.8° | 50.3° |
| O4' | C4' | C5' | H5'2 | 155.0° | 170.3° |
| O4' | C4' | C3' | H3' | 152.9° | 94.7° |
| C4' | O4' | C1' | H1' | 112.5° | 78.3° |
| N4 | C4 | C5 | C6 | 179.9° | 179.9° |
| N4 | C4 | C5 | H5 | 0.1° | 0.0° |
| C4 | N4 | HN41 | HN42 | 180.0° | 180.0° |
| C4 | C5 | C6 | N1 | 0.7° | 0.1° |
| C4 | C5 | C6 | H5 | 180.0° | 179.9° |
| C4 | C5 | C6 | H6 | 179.3° | 180.0° |
| C5 | C4 | N4 | HN41 | 0.6° | 0.0° |
| C5 | C4 | N4 | HN42 | 179.4° | 180.0° |
| N1 | C1' | C2' | H1' | 114.7° | 122.4° |
| C1' | N1 | C6 | C5 | 179.6° | 179.9° |
| N1 | C1' | C2' | C3' | 158.1° | 142.8° |
| N1 | C1' | C2' | O2' | 71.5° | 98.5° |
| N1 | C1' | C2' | H2' | 33.5° | 24.1° |
| C1' | N1 | C6 | H6 | 0.4° | 0.0° |
| C6 | N1 | C1' | C2' | 61.5° | 118.2° |
| N1 | C6 | C5 | H6 | 180.0° | 179.9° |
| C6 | N1 | C1' | H1' | 178.4° | 4.2° |
| N1 | C6 | C5 | H5 | 179.3° | 180.0° |
| C1' | C2' | C3' | C4' | 29.3° | 0.0° |
| C1' | C2' | C3' | O3' | 86.0° | 118.7° |
| C1' | C2' | C3' | O2' | 132.4° | 118.6° |
| C1' | C2' | C3' | H2' | 122.2° | 118.8° |
| C1' | C2' | O2' | H2' | 118.6° | 122.7° |
| C1' | C2' | C3' | H3' | 156.5° | 118.7° |
| C1' | C2' | O2' | HO2' | 30.0° | 176.1° |
| C5' | C4' | C3' | H4' | 110.2° | 122.3° |
| C4' | C5' | O5' | H5'1 | 120.0° | 120.1° |
| C4' | C5' | O5' | H5'2 | 112.8° | 120.0° |
| C5' | C4' | C3' | O3' | 142.6° | 98.5° |
| C5' | C4' | C3' | C2' | 94.3° | 142.8° |
| C4' | C5' | O5' | PA | 118.1° | 180.0° |
| C4' | C5' | H5'1 | H5'2 | 114.2° | 120.0° |
| C5' | C4' | C3' | H3' | 25.9° | 24.1° |
| C3' | C4' | C5' | O5' | 35.1° | 175.0° |
| C4' | C3' | O3' | C2' | 111.0° | 114.7° |
| C4' | C3' | O3' | H3' | 127.6° | 122.7° |
| C4' | C3' | C2' | H3' | 127.2° | 118.7° |
| C4' | C3' | C2' | O2' | 161.7° | 118.6° |
| C3' | C4' | C5' | H5'1 | 155.1° | 65.0° |
| C3' | C4' | C5' | H5'2 | 77.7° | 55.0° |
| C4' | C3' | O3' | HO3' | 11.7° | 180.0° |
| C4' | C3' | C2' | H2' | 92.9° | 118.8° |
| C14 | C1B | PB | H1B1 | 120.0° | 120.0° |
| C14 | C1B | PB | H1B2 | 116.7° | 120.0° |
| C14 | C1B | PB | O3A | 59.8° | 175.0° |
| C14 | C1B | PB | O3B | 179.9° | 55.0° |
| C14 | C1B | PB | O2B | 54.6° | 65.0° |
| C14 | C1B | H1B1 | H1B2 | 117.0° | 120.0° |
| C1B | C14 | H141 | H142 | 116.0° | 120.0° |
| C1B | C14 | N15 | H151 | 75.1° | 56.1° |
| C1B | C14 | N15 | H152 | 164.9° | 180.0° |
| C5' | O5' | PA | O3A | 57.2° | 175.0° |
| C5' | O5' | PA | O1A | 160.9° | 54.9° |
| C5' | O5' | PA | O2A | 71.8° | 65.0° |
| O5' | C5' | H5'1 | H5'2 | 114.3° | 119.9° |
| O5' | C5' | C4' | H4' | 144.8° | 52.7° |
| O3' | C3' | C2' | H3' | 117.5° | 122.6° |
| O3' | C3' | C2' | O2' | 46.4° | 0.0° |
| O3' | C3' | C4' | H4' | 32.4° | 23.7° |
| O3' | C3' | C2' | H2' | 151.7° | 122.6° |
| C1B | PB | O3A | O3B | 121.6° | 120.0° |
| C1B | PB | O3A | O2B | 114.5° | 120.0° |
| C1B | PB | O3A | PA | 157.0° | 180.0° |
| C1B | PB | O3B | O2B | 120.8° | 120.0° |
| C1B | PB | O2B | HO2B | 11.5° | 60.0° |
| PB | C1B | H1B1 | H1B2 | 117.1° | 120.1° |
| PB | C1B | C14 | H141 | 60.3° | 60.0° |
| PB | C1B | C14 | H142 | 64.5° | 60.0° |
| C3' | C2' | O2' | H2' | 121.5° | 122.6° |
| C2' | C3' | C4' | H4' | 155.5° | 94.9° |
| C2' | C3' | O3' | HO3' | 99.3° | 65.3° |
| C3' | C2' | O2' | HO2' | 89.9° | 61.4° |
| C3' | C2' | C1' | H1' | 87.2° | 94.8° |
| O2' | C2' | C3' | H3' | 71.1° | 122.6° |
| O2' | C2' | C1' | H1' | 43.3° | 23.8° |
| O5' | PA | O3A | PB | 179.3° | 160.0° |
| O5' | PA | O3A | O1A | 97.2° | 120.1° |
| O5' | PA | O3A | O2A | 138.1° | 119.9° |
| O5' | PA | O1A | O2A | 134.1° | 119.9° |
| O5' | PA | O2A | HO2A | 82.0° | 60.0° |
| PA | O5' | C5' | H5'1 | 122.0° | 59.9° |
| PA | O5' | C5' | H5'2 | 5.3° | 60.0° |
| O3A | PB | O3B | O2B | 119.1° | 120.0° |
| PB | O3A | PA | O1A | 83.5° | 39.9° |
| PB | O3A | PA | O2A | 41.2° | 80.1° |
| O3A | PB | O2B | HO2B | 104.5° | 60.0° |
| O3A | PB | C1B | H1B1 | 60.3° | 55.1° |
| O3A | PB | C1B | H1B2 | 176.5° | 65.0° |
| PA | O3A | PB | O3B | 81.3° | 60.0° |
| PA | O3A | PB | O2B | 42.6° | 60.1° |
| O3A | PA | O1A | O2A | 120.2° | 120.0° |
| O3A | PA | O2A | HO2A | 44.7° | 60.0° |
| O3B | PB | O2B | HO2B | 134.9° | 180.0° |
| O3B | PB | C1B | H1B1 | 60.1° | 65.0° |
| O3B | PB | C1B | H1B2 | 63.2° | 175.0° |
| O2B | PB | C1B | H1B1 | 174.6° | 175.0° |
| O2B | PB | C1B | H1B2 | 62.1° | 55.0° |
| O1A | PA | O2A | HO2A | 160.6° | 180.0° |
| H1B1 | C1B | C14 | H141 | 179.7° | 180.0° |
| H1B1 | C1B | C14 | H142 | 55.6° | 59.9° |
| H1B2 | C1B | C14 | H141 | 56.4° | 60.0° |
| H1B2 | C1B | C14 | H142 | 178.8° | 180.0° |
| H141 | C14 | N15 | H151 | 164.9° | 63.9° |
| H141 | C14 | N15 | H152 | 44.9° | 60.0° |
| H142 | C14 | N15 | H151 | 40.2° | 176.1° |
| H142 | C14 | N15 | H152 | 79.8° | 60.1° |
| H5'1 | C5' | C4' | H4' | 95.2° | 172.7° |
| H5'2 | C5' | C4' | H4' | 32.0° | 67.3° |
| H4' | C4' | C3' | H3' | 84.3° | 146.4° |
| H3' | C3' | O3' | HO3' | 139.3° | 57.3° |
| H3' | C3' | C2' | H2' | 34.3° | 0.0° |
| H2' | C2' | O2' | HO2' | 148.6° | 61.2° |
| H2' | C2' | C1' | H1' | 148.2° | 146.4° |
| H6 | C6 | C5 | H5 | 0.7° | 0.1° |
