0R8

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
OP2	P	sing	1.61Å	1.59Å
C5'	C4'	sing	1.53Å	1.55Å
C5'	O5'	sing	1.43Å	1.42Å
C4'	C3'	sing	1.55Å	1.54Å
C4'	O4'	sing	1.44Å	1.44Å
C3'	C2'	sing	1.56Å	1.55Å
C2'	C1'	sing	1.54Å	1.55Å
O5'	P	sing	1.61Å	1.61Å
P	OP1	doub	1.48Å	1.59Å
O4'	C1'	sing	1.43Å	1.42Å
C1'	N1	sing	1.46Å	1.45Å
N1	C6	sing	1.36Å	1.36Å
N1	C2	sing	1.34Å	1.34Å
O2	C2	doub	1.22Å	1.22Å
C6	C5	doub	1.38Å	1.34Å
C2	N3	sing	1.33Å	1.43Å
C5	C1	sing	1.43Å	1.44Å
C5	C4	sing	1.47Å	1.47Å
N3	C4	doub	1.33Å	1.27Å
C1	C3	trip	1.17Å	1.20Å
C4	N4	sing	1.37Å	1.35Å
C3	C01	sing	1.43Å	1.44Å
C02	C01	doub	1.40Å	1.40Å	Aromatic
C02	C03	sing	1.37Å	1.40Å	Aromatic
C01	C	sing	1.40Å	1.40Å	Aromatic
C03	C04	doub	1.40Å	1.40Å	Aromatic
C	C05	doub	1.37Å	1.40Å	Aromatic
C04	C05	sing	1.40Å	1.40Å	Aromatic
C04	C7	sing	1.43Å	1.44Å
C7	C8	trip	1.17Å	1.20Å
OP2	HOP2	sing	0.97Å	0.95Å
C1'	H1'	sing	1.09Å	1.10Å
C6	H6	sing	1.08Å	1.08Å
N4	H41	sing	0.97Å	1.00Å
N4	H42	sing	0.97Å	1.00Å
C4'	H7	sing	1.09Å	1.10Å
C3'	H3'	sing	1.09Å	1.10Å
C3'	H3''	sing	1.09Å	1.10Å
C2'	H2'	sing	1.09Å	1.10Å
C2'	H2''	sing	1.09Å	1.10Å
C5'	H5'	sing	1.09Å	1.10Å
C5'	H5''	sing	1.09Å	1.10Å
C02	H14	sing	1.08Å	1.08Å
C03	H15	sing	1.08Å	1.08Å
C05	H16	sing	1.08Å	1.08Å
C	H17	sing	1.08Å	1.08Å
C8	H18	sing	1.05Å	1.06Å
P	OP3	sing	1.61Å	30.66Å
OP3	HOP3	sing	0.97Å	0.00Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
OP2	P	O5'	109.9°	109.4°
OP2	P	OP1	114.1°	109.5°
P	OP2	HOP2	109.5°	114.0°
OP2	P	OP3	102.2°	109.5°
C4'	C5'	O5'	112.1°	109.5°
C5'	C4'	C3'	113.5°	110.3°
C5'	C4'	O4'	111.3°	110.3°
C5'	C4'	H7	109.4°	110.3°
C4'	C5'	H5'	108.8°	109.5°
C4'	C5'	H5''	108.8°	109.5°
C5'	O5'	P	125.1°	123.0°
O5'	C5'	H5'	108.8°	109.4°
O5'	C5'	H5''	108.8°	109.5°
C3'	C4'	O4'	101.9°	105.1°
C4'	C3'	C2'	100.5°	101.0°
C3'	C4'	H7	109.5°	110.3°
C4'	C3'	H3'	111.7°	111.1°
C4'	C3'	H3''	111.7°	111.2°
C4'	O4'	C1'	111.4°	110.0°
O4'	C4'	H7	111.0°	110.3°
C3'	C2'	C1'	101.1°	102.1°
C2'	C3'	H3'	111.7°	111.1°
C2'	C3'	H3''	111.7°	111.1°
C3'	C2'	H2'	111.5°	110.8°
C3'	C2'	H2''	111.5°	110.8°
C2'	C1'	O4'	105.6°	107.7°
C2'	C1'	N1	115.1°	109.9°
C2'	C1'	H1'	107.7°	109.8°
C1'	C2'	H2'	111.5°	111.0°
C1'	C2'	H2''	111.5°	110.9°
O5'	P	OP1	109.8°	109.5°
O5'	P	OP3	97.9°	109.4°
OP1	P	OP3	22.9°	109.5°
O4'	C1'	N1	110.0°	109.8°
O4'	C1'	H1'	109.3°	109.8°
C1'	N1	C6	122.5°	119.5°
C1'	N1	C2	116.8°	119.4°
N1	C1'	H1'	108.9°	109.8°
C6	N1	C2	120.5°	121.1°
N1	C6	C5	119.1°	118.9°
N1	C6	H6	120.4°	120.5°
N1	C2	O2	122.7°	118.9°
N1	C2	N3	120.2°	122.2°
O2	C2	N3	117.0°	118.9°
C6	C5	C1	121.4°	121.0°
C6	C5	C4	121.6°	118.0°
C5	C6	H6	120.5°	120.6°
C2	N3	C4	121.3°	121.0°
C1	C5	C4	117.0°	121.0°
C5	C1	C3	174.3°	179.9°
C5	C4	N3	117.2°	118.8°
C5	C4	N4	121.0°	120.6°
N3	C4	N4	121.7°	120.6°
C1	C3	C01	172.5°	180.0°
C4	N4	H41	120.0°	120.0°
C4	N4	H42	120.0°	120.0°
C3	C01	C02	122.1°	120.0°
C3	C01	C	117.5°	120.0°
C01	C02	C03	119.9°	120.0°
C02	C01	C	120.4°	119.9°
C01	C02	H14	120.1°	120.0°
C02	C03	C04	119.6°	120.0°
C03	C02	H14	120.1°	120.0°
C02	C03	H15	120.2°	120.0°
C01	C	C05	120.0°	120.0°
C01	C	H17	120.0°	120.0°
C03	C04	C05	120.6°	120.1°
C03	C04	C7	120.3°	120.0°
C04	C03	H15	120.2°	120.0°
C	C05	C04	119.5°	120.0°
C	C05	H16	120.2°	120.0°
C05	C	H17	120.0°	120.0°
C05	C04	C7	119.1°	120.0°
C04	C05	H16	120.3°	120.0°
C04	C7	C8	178.8°	180.0°
C7	C8	H18	180.0°	180.0°
H41	N4	H42	120.0°	120.1°
H3'	C3'	H3''	109.5°	111.0°
H2'	C2'	H2''	109.5°	110.9°
H5'	C5'	H5''	109.5°	109.5°
P	OP3	HOP3	90.0°	114.0°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
OP2	P	O5'	C5'	44.3°	65.1°
OP2	P	O5'	OP1	126.3°	120.0°
OP2	P	O5'	OP3	106.1°	120.0°
OP2	P	OP1	OP3	62.2°	120.0°
OP2	P	OP3	HOP3	90.0°	60.0°
C4'	C5'	O5'	H5'	120.4°	120.0°
C4'	C5'	O5'	H5''	120.4°	120.0°
C5'	C4'	C3'	O4'	119.8°	118.9°
C5'	C4'	C3'	H7	122.7°	122.2°
C5'	C4'	O4'	H7	122.1°	122.2°
C5'	C4'	C3'	C2'	161.9°	155.4°
C4'	C5'	O5'	P	168.3°	180.0°
C5'	C4'	O4'	C1'	149.9°	143.4°
C5'	C4'	C3'	H3'	43.4°	37.4°
C5'	C4'	C3'	H3''	79.6°	86.7°
C4'	C5'	H5'	H5''	118.8°	120.0°
O5'	C5'	C4'	C3'	51.5°	175.0°
O5'	C5'	C4'	O4'	62.8°	69.3°
C5'	O5'	P	OP1	170.6°	54.9°
O5'	C5'	C4'	H7	174.3°	52.9°
O5'	C5'	H5'	H5''	118.8°	120.0°
C5'	O5'	P	OP3	150.4°	175.0°
C3'	C4'	O4'	H7	116.6°	118.9°
C4'	C3'	C2'	H3'	118.5°	117.9°
C4'	C3'	C2'	H3''	118.5°	118.0°
C4'	C3'	C2'	C1'	40.1°	34.2°
C3'	C4'	O4'	C1'	28.5°	24.4°
C4'	C3'	H3'	H3''	124.2°	124.2°
C4'	C3'	C2'	H2'	158.8°	84.1°
C4'	C3'	C2'	H2''	78.5°	152.3°
C3'	C4'	C5'	H5'	171.9°	65.0°
C3'	C4'	C5'	H5''	68.9°	55.0°
O4'	C4'	C3'	C2'	42.1°	36.5°
C4'	O4'	C1'	C2'	2.5°	1.6°
C4'	O4'	C1'	N1	127.3°	121.2°
C4'	O4'	C1'	H1'	113.1°	117.9°
O4'	C4'	C3'	H3'	76.4°	81.5°
O4'	C4'	C3'	H3''	160.6°	154.4°
O4'	C4'	C5'	H5'	57.6°	50.7°
O4'	C4'	C5'	H5''	176.8°	170.7°
C3'	C2'	C1'	H2'	118.6°	118.2°
C3'	C2'	C1'	H2''	118.6°	118.1°
C3'	C2'	C1'	O4'	24.3°	21.4°
C3'	C2'	C1'	N1	97.2°	98.2°
C3'	C2'	C1'	H1'	141.1°	140.9°
C2'	C3'	C4'	H7	75.4°	82.5°
C2'	C3'	H3'	H3''	124.2°	124.2°
C3'	C2'	H2'	H2''	123.9°	123.6°
C2'	C1'	O4'	N1	124.8°	119.6°
C2'	C1'	O4'	H1'	115.6°	119.5°
C2'	C1'	N1	H1'	121.0°	120.9°
C2'	C1'	N1	C6	94.3°	92.4°
C2'	C1'	N1	C2	89.5°	87.3°
C1'	C2'	C3'	H3'	78.4°	83.8°
C1'	C2'	C3'	H3''	158.6°	152.1°
C1'	C2'	H2'	H2''	123.9°	123.7°
O5'	P	OP1	OP3	61.7°	120.0°
O5'	P	OP2	HOP2	123.8°	60.0°
P	O5'	C5'	H5'	47.9°	60.1°
P	O5'	C5'	H5''	71.3°	59.9°
O5'	P	OP3	HOP3	90.0°	179.9°
OP1	P	OP2	HOP2	0.0°	180.0°
OP1	P	OP3	HOP3	90.0°	60.0°
O4'	C1'	N1	H1'	119.8°	120.9°
O4'	C1'	N1	C6	24.8°	25.9°
O4'	C1'	N1	C2	151.3°	154.5°
C1'	O4'	C4'	H7	88.0°	94.5°
O4'	C1'	C2'	H2'	142.9°	96.8°
O4'	C1'	C2'	H2''	94.3°	139.5°
C1'	N1	C6	C2	176.0°	179.7°
C1'	N1	C2	O2	6.2°	0.0°
C1'	N1	C6	C5	176.5°	180.0°
C1'	N1	C2	N3	176.6°	179.8°
C1'	N1	C6	H6	3.4°	0.2°
N1	C1'	C2'	H2'	21.4°	143.7°
N1	C1'	C2'	H2''	144.1°	19.9°
C6	N1	C2	O2	177.6°	179.7°
N1	C6	C5	H6	180.0°	179.8°
C6	N1	C2	N3	0.4°	0.5°
N1	C6	C5	C1	179.6°	180.0°
N1	C6	C5	C4	0.7°	0.1°
C6	N1	C1'	H1'	144.6°	146.7°
N1	C2	O2	N3	177.3°	179.8°
C2	N1	C6	C5	0.6°	0.3°
N1	C2	N3	C4	0.3°	0.5°
C2	N1	C1'	H1'	31.5°	33.6°
C2	N1	C6	H6	179.4°	179.8°
O2	C2	N3	C4	177.7°	179.7°
C6	C5	C1	C4	179.7°	179.9°
C6	C5	C4	N3	0.6°	0.1°
C6	C5	C1	C3	145.9°	105.3°
C6	C5	C4	N4	176.4°	180.0°
C2	N3	C4	C5	0.4°	0.3°
C2	N3	C4	N4	176.6°	179.8°
C1	C5	C4	N3	179.6°	180.0°
C1	C5	C4	N4	3.4°	0.1°
C5	C1	C3	C01	5.1°	141.5°
C1	C5	C6	H6	0.4°	0.2°
C5	C4	N3	N4	177.0°	179.9°
C4	C5	C1	C3	34.4°	74.9°
C4	C5	C6	H6	179.3°	179.9°
C5	C4	N4	H41	176.9°	0.0°
C5	C4	N4	H42	3.2°	179.9°
N3	C4	N4	H41	0.0°	180.0°
N3	C4	N4	H42	180.0°	0.0°
C1	C3	C01	C02	175.6°	113.0°
C1	C3	C01	C	4.7°	66.6°
C4	N4	H41	H42	180.0°	180.0°
C3	C01	C02	C	179.7°	179.7°
C3	C01	C02	C03	179.6°	180.0°
C3	C01	C	C05	179.9°	179.7°
C3	C01	C02	H14	0.4°	0.0°
C3	C01	C	H17	0.1°	0.1°
C01	C02	C03	H14	180.0°	180.0°
C01	C02	C03	C04	0.4°	0.0°
C02	C01	C	C05	0.2°	0.7°
C01	C02	C03	H15	179.6°	180.0°
C02	C01	C	H17	179.8°	179.7°
C03	C02	C01	C	0.0°	0.3°
C02	C03	C04	H15	180.0°	180.0°
C02	C03	C04	C05	0.4°	0.0°
C02	C03	C04	C7	179.7°	180.0°
C01	C	C05	H17	180.0°	179.6°
C01	C	C05	C04	0.1°	0.7°
C	C01	C02	H14	179.9°	179.6°
C01	C	C05	H16	179.9°	179.6°
C03	C04	C05	C	0.2°	0.4°
C03	C04	C05	C7	179.9°	180.0°
C03	C04	C7	C8	179.9°	67.0°
C04	C03	C02	H14	179.6°	180.0°
C03	C04	C05	H16	179.8°	180.0°
C	C05	C04	H16	180.0°	179.7°
C	C05	C04	C7	179.9°	179.7°
C05	C04	C7	C8	0.2°	113.0°
C05	C04	C03	H15	179.6°	180.0°
C04	C05	C	H17	179.9°	179.7°
C7	C04	C03	H15	0.3°	0.0°
C7	C04	C05	H16	0.1°	0.0°
C04	C7	C8	H18	151.7°	110.3°
HOP2	OP2	P	OP3	20.6°	60.0°
H1'	C1'	C2'	H2'	100.3°	22.8°
H1'	C1'	C2'	H2''	22.4°	101.0°
H7	C4'	C3'	H3'	166.0°	159.6°
H7	C4'	C3'	H3''	43.1°	35.5°
H7	C4'	C5'	H5'	65.4°	172.9°
H7	C4'	C5'	H5''	53.8°	67.1°
H3'	C3'	C2'	H2'	40.2°	158.0°
H3'	C3'	C2'	H2''	162.9°	34.4°
H3''	C3'	C2'	H2'	82.7°	33.9°
H3''	C3'	C2'	H2''	40.0°	89.7°
H14	C02	C03	H15	0.4°	0.0°
H16	C05	C	H17	0.1°	0.0°

Release date:	2013-04-24
Definition date:	2012-04-27
Last modified:	2013-04-19
Release status:	REL
Processing site:	RCSB
Derived from:	4ELV