0R6
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| O1G | PG | doub | 1.48Å | 1.52Å | |
| O3G | PG | sing | 1.61Å | 1.52Å | |
| PG | O2G | sing | 1.61Å | 1.51Å | |
| PG | O3B | sing | 1.61Å | 1.62Å | |
| O1B | PB | doub | 1.48Å | 1.51Å | |
| O1A | PA | doub | 1.48Å | 1.50Å | |
| O3B | PB | sing | 1.61Å | 1.61Å | |
| PB | O2B | sing | 1.61Å | 1.51Å | |
| PB | O3A | sing | 1.61Å | 1.61Å | |
| C5' | O5' | sing | 1.43Å | 1.43Å | |
| C5' | C4' | sing | 1.53Å | 1.53Å | |
| PA | O3A | sing | 1.61Å | 1.62Å | |
| PA | O5' | sing | 1.61Å | 1.60Å | |
| PA | O2A | sing | 1.61Å | 1.51Å | |
| O3' | C3' | sing | 1.43Å | 1.44Å | |
| C4' | C3' | sing | 1.55Å | 1.52Å | |
| C4' | O4' | sing | 1.45Å | 1.43Å | |
| C3' | C2' | sing | 1.55Å | 1.52Å | |
| O4' | C1' | sing | 1.44Å | 1.43Å | |
| C2' | C1' | sing | 1.54Å | 1.53Å | |
| C33 | C32 | doub | 1.37Å | 1.40Å | Aromatic |
| C33 | C34 | sing | 1.40Å | 1.38Å | Aromatic |
| C1' | N1 | sing | 1.47Å | 1.48Å | |
| C32 | C31 | sing | 1.40Å | 1.39Å | Aromatic |
| C38 | C37 | trip | 1.17Å | 1.28Å | |
| C37 | C34 | sing | 1.43Å | 1.29Å | |
| C34 | C35 | doub | 1.40Å | 1.40Å | Aromatic |
| C6 | N1 | sing | 1.36Å | 1.35Å | |
| C6 | C5 | doub | 1.38Å | 1.40Å | |
| N1 | C2 | sing | 1.34Å | 1.41Å | |
| C31 | C30 | sing | 1.43Å | 1.32Å | |
| C31 | C36 | doub | 1.40Å | 1.40Å | Aromatic |
| C30 | C29 | trip | 1.17Å | 1.21Å | |
| C29 | C5 | sing | 1.43Å | 1.31Å | |
| C5 | C4 | sing | 1.47Å | 1.48Å | |
| C35 | C36 | sing | 1.37Å | 1.40Å | Aromatic |
| C2 | O2 | doub | 1.22Å | 1.25Å | |
| C2 | N3 | sing | 1.33Å | 1.36Å | |
| C4 | N3 | doub | 1.33Å | 1.36Å | |
| C4 | N4 | sing | 1.37Å | 1.36Å | |
| N4 | H1 | sing | 0.97Å | 1.00Å | |
| N4 | H2 | sing | 0.97Å | 1.00Å | |
| C36 | H3 | sing | 1.08Å | 1.08Å | |
| C35 | H4 | sing | 1.08Å | 1.08Å | |
| C38 | H5 | sing | 1.05Å | 1.06Å | |
| C33 | H6 | sing | 1.08Å | 1.08Å | |
| C32 | H7 | sing | 1.08Å | 1.08Å | |
| C6 | H8 | sing | 1.08Å | 1.08Å | |
| C1' | H9 | sing | 1.09Å | 1.10Å | |
| C2' | H10 | sing | 1.09Å | 1.10Å | |
| C2' | H11 | sing | 1.09Å | 1.10Å | |
| C3' | H12 | sing | 1.09Å | 1.10Å | |
| O3' | H13 | sing | 0.97Å | 0.95Å | |
| C4' | H14 | sing | 1.09Å | 1.10Å | |
| C5' | H15 | sing | 1.09Å | 1.10Å | |
| C5' | H16 | sing | 1.09Å | 1.10Å | |
| O2A | H17 | sing | 0.97Å | 0.95Å | |
| O2B | H18 | sing | 0.97Å | 0.95Å | |
| O3G | H19 | sing | 0.97Å | 0.95Å | |
| O2G | H20 | sing | 0.97Å | 0.95Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| O1G | PG | O3G | 114.3° | 109.5° |
| O1G | PG | O2G | 114.1° | 109.5° |
| O1G | PG | O3B | 103.1° | 109.5° |
| O3G | PG | O2G | 113.5° | 109.4° |
| O3G | PG | O3B | 107.3° | 109.5° |
| PG | O3G | H19 | 109.5° | 114.0° |
| O2G | PG | O3B | 102.9° | 109.5° |
| PG | O2G | H20 | 109.5° | 114.0° |
| PG | O3B | PB | 127.3° | 134.0° |
| O1B | PB | O3B | 113.5° | 109.4° |
| O1B | PB | O2B | 117.6° | 109.5° |
| O1B | PB | O3A | 111.5° | 109.4° |
| O1A | PA | O3A | 112.8° | 109.5° |
| O1A | PA | O5' | 111.5° | 109.5° |
| O1A | PA | O2A | 117.0° | 109.4° |
| O3B | PB | O2B | 105.0° | 109.5° |
| O3B | PB | O3A | 102.6° | 109.4° |
| O2B | PB | O3A | 105.3° | 109.5° |
| PB | O2B | H18 | 109.5° | 114.0° |
| PB | O3A | PA | 128.8° | 134.0° |
| O5' | C5' | C4' | 108.1° | 109.4° |
| C5' | O5' | PA | 117.5° | 123.0° |
| O5' | C5' | H15 | 109.8° | 109.4° |
| O5' | C5' | H16 | 109.8° | 109.5° |
| C5' | C4' | C3' | 113.7° | 110.6° |
| C5' | C4' | O4' | 112.2° | 110.6° |
| C5' | C4' | H14 | 108.1° | 110.7° |
| C4' | C5' | H15 | 109.8° | 109.5° |
| C4' | C5' | H16 | 109.8° | 109.5° |
| O3A | PA | O5' | 99.3° | 109.5° |
| O3A | PA | O2A | 105.1° | 109.4° |
| O5' | PA | O2A | 109.6° | 109.5° |
| PA | O2A | H17 | 109.5° | 114.0° |
| O3' | C3' | C4' | 112.2° | 111.0° |
| O3' | C3' | C2' | 112.0° | 110.9° |
| O3' | C3' | H12 | 111.0° | 110.8° |
| C3' | O3' | H13 | 109.5° | 114.1° |
| C3' | C4' | O4' | 105.1° | 103.6° |
| C4' | C3' | C2' | 101.8° | 102.1° |
| C4' | C3' | H12 | 109.8° | 110.9° |
| C3' | C4' | H14 | 108.2° | 110.6° |
| C4' | O4' | C1' | 111.1° | 106.9° |
| O4' | C4' | H14 | 109.4° | 110.5° |
| C3' | C2' | C1' | 103.7° | 104.2° |
| C3' | C2' | H10 | 110.9° | 110.5° |
| C3' | C2' | H11 | 110.9° | 110.6° |
| C2' | C3' | H12 | 109.7° | 110.9° |
| O4' | C1' | C2' | 105.9° | 107.4° |
| O4' | C1' | N1 | 113.1° | 109.9° |
| O4' | C1' | H9 | 111.9° | 109.9° |
| C2' | C1' | N1 | 104.1° | 109.9° |
| C2' | C1' | H9 | 110.4° | 109.9° |
| C1' | C2' | H10 | 110.9° | 110.5° |
| C1' | C2' | H11 | 110.9° | 110.5° |
| C32 | C33 | C34 | 119.3° | 120.0° |
| C33 | C32 | C31 | 122.1° | 120.0° |
| C32 | C33 | H6 | 120.4° | 120.0° |
| C33 | C32 | H7 | 118.9° | 120.0° |
| C33 | C34 | C37 | 119.1° | 120.0° |
| C33 | C34 | C35 | 120.0° | 120.0° |
| C34 | C33 | H6 | 120.4° | 120.0° |
| C1' | N1 | C6 | 123.6° | 119.5° |
| C1' | N1 | C2 | 115.7° | 119.4° |
| N1 | C1' | H9 | 111.0° | 109.8° |
| C32 | C31 | C30 | 119.8° | 120.0° |
| C32 | C31 | C36 | 118.2° | 120.0° |
| C31 | C32 | H7 | 119.0° | 120.0° |
| C38 | C37 | C34 | 179.7° | 179.9° |
| C37 | C38 | H5 | 180.0° | 180.0° |
| C37 | C34 | C35 | 120.9° | 120.0° |
| C34 | C35 | C36 | 120.2° | 120.1° |
| C34 | C35 | H4 | 119.9° | 120.0° |
| N1 | C6 | C5 | 121.2° | 118.9° |
| C6 | N1 | C2 | 120.7° | 121.1° |
| N1 | C6 | H8 | 119.4° | 120.6° |
| C6 | C5 | C29 | 124.0° | 121.0° |
| C6 | C5 | C4 | 116.4° | 118.0° |
| C5 | C6 | H8 | 119.4° | 120.6° |
| N1 | C2 | O2 | 119.1° | 118.9° |
| N1 | C2 | N3 | 120.7° | 122.2° |
| C30 | C31 | C36 | 121.9° | 120.0° |
| C31 | C30 | C29 | 178.7° | 180.0° |
| C31 | C36 | C35 | 120.2° | 119.9° |
| C31 | C36 | H3 | 119.9° | 120.0° |
| C30 | C29 | C5 | 179.2° | 179.9° |
| C29 | C5 | C4 | 119.6° | 121.0° |
| C5 | C4 | N3 | 120.5° | 118.8° |
| C5 | C4 | N4 | 119.6° | 120.6° |
| C35 | C36 | H3 | 119.9° | 120.1° |
| C36 | C35 | H4 | 119.9° | 120.0° |
| O2 | C2 | N3 | 120.1° | 118.9° |
| C2 | N3 | C4 | 120.5° | 121.0° |
| N3 | C4 | N4 | 119.9° | 120.6° |
| C4 | N4 | H1 | 120.0° | 120.0° |
| C4 | N4 | H2 | 120.0° | 120.0° |
| H1 | N4 | H2 | 120.0° | 120.0° |
| H10 | C2' | H11 | 109.5° | 110.4° |
| H15 | C5' | H16 | 109.5° | 109.5° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| O1G | PG | O3G | O2G | 133.3° | 120.0° |
| O1G | PG | O3G | O3B | 113.7° | 120.0° |
| O1G | PG | O2G | O3B | 111.0° | 120.0° |
| O1G | PG | O3B | PB | 115.4° | 45.0° |
| O1G | PG | O3G | H19 | 0.0° | 180.0° |
| O1G | PG | O2G | H20 | 0.0° | 59.9° |
| O3G | PG | O2G | O3B | 115.7° | 120.0° |
| O3G | PG | O3B | PB | 5.6° | 75.1° |
| O3G | PG | O2G | H20 | 133.4° | 60.0° |
| O2G | PG | O3B | PB | 125.7° | 165.0° |
| O2G | PG | O3G | H19 | 133.3° | 60.0° |
| PG | O3B | PB | O1B | 30.9° | 45.1° |
| PG | O3B | PB | O2B | 160.6° | 75.0° |
| PG | O3B | PB | O3A | 89.6° | 165.0° |
| O3B | PG | O3G | H19 | 113.7° | 60.0° |
| O3B | PG | O2G | H20 | 111.0° | 180.0° |
| O1B | PB | O3B | O2B | 129.7° | 120.0° |
| O1B | PB | O3B | O3A | 120.4° | 119.9° |
| O1B | PB | O2B | O3A | 124.8° | 120.0° |
| O1B | PB | O3A | PA | 16.3° | 40.1° |
| O1B | PB | O2B | H18 | 0.0° | 180.0° |
| O1A | PA | O3A | PB | 15.1° | 39.9° |
| O1A | PA | O5' | C5' | 36.3° | 55.0° |
| O1A | PA | O3A | O5' | 118.1° | 120.1° |
| O1A | PA | O3A | O2A | 128.5° | 120.0° |
| O1A | PA | O5' | O2A | 131.1° | 120.0° |
| O1A | PA | O2A | H17 | 0.0° | 179.9° |
| O3B | PB | O2B | O3A | 107.9° | 120.0° |
| O3B | PB | O3A | PA | 105.5° | 160.0° |
| O3B | PB | O2B | H18 | 127.3° | 60.0° |
| O2B | PB | O3A | PA | 144.9° | 79.9° |
| PB | O3A | PA | O5' | 103.0° | 159.9° |
| PB | O3A | PA | O2A | 143.6° | 80.1° |
| O3A | PB | O2B | H18 | 124.8° | 60.0° |
| O5' | C5' | C4' | H15 | 119.8° | 119.9° |
| O5' | C5' | C4' | H16 | 119.8° | 120.0° |
| C5' | O5' | PA | O3A | 82.8° | 175.0° |
| C5' | O5' | PA | O2A | 167.4° | 65.0° |
| O5' | C5' | C4' | C3' | 61.9° | 175.0° |
| O5' | C5' | C4' | O4' | 57.2° | 70.8° |
| O5' | C5' | C4' | H14 | 177.9° | 52.0° |
| O5' | C5' | H15 | H16 | 120.6° | 120.0° |
| C4' | C5' | O5' | PA | 140.3° | 180.0° |
| C5' | C4' | C3' | O3' | 83.4° | 86.3° |
| C5' | C4' | C3' | O4' | 123.0° | 118.6° |
| C5' | C4' | C3' | H14 | 120.2° | 123.0° |
| C5' | C4' | O4' | H14 | 120.0° | 123.0° |
| C5' | C4' | C3' | C2' | 156.7° | 155.5° |
| C5' | C4' | O4' | C1' | 145.4° | 158.4° |
| C5' | C4' | C3' | H12 | 40.5° | 37.4° |
| C4' | C5' | H15 | H16 | 120.7° | 120.1° |
| O3A | PA | O5' | O2A | 109.7° | 120.0° |
| O3A | PA | O2A | H17 | 126.0° | 60.0° |
| PA | O5' | C5' | H15 | 20.5° | 60.1° |
| PA | O5' | C5' | H16 | 99.9° | 60.0° |
| O5' | PA | O2A | H17 | 128.2° | 60.0° |
| O3' | C3' | C4' | C2' | 119.9° | 118.2° |
| O3' | C3' | C4' | H12 | 123.9° | 123.7° |
| O3' | C3' | C4' | O4' | 153.6° | 155.1° |
| O3' | C3' | C2' | H12 | 123.7° | 123.5° |
| O3' | C3' | C2' | C1' | 153.4° | 139.1° |
| O3' | C3' | C2' | H10 | 87.5° | 20.5° |
| O3' | C3' | C2' | H11 | 34.3° | 102.1° |
| O3' | C3' | C4' | H14 | 36.8° | 36.7° |
| C3' | C4' | O4' | H14 | 116.0° | 118.5° |
| C4' | C3' | C2' | H12 | 116.3° | 118.2° |
| C3' | C4' | O4' | C1' | 21.3° | 39.9° |
| C4' | C3' | C2' | C1' | 33.3° | 20.9° |
| C4' | C3' | C2' | H10 | 152.4° | 97.8° |
| C4' | C3' | C2' | H11 | 85.7° | 139.6° |
| C4' | C3' | O3' | H13 | 180.0° | 174.2° |
| C3' | C4' | C5' | H15 | 57.9° | 55.1° |
| C3' | C4' | C5' | H16 | 178.4° | 65.0° |
| O4' | C4' | C3' | C2' | 33.6° | 37.0° |
| C4' | O4' | C1' | C2' | 0.4° | 26.4° |
| C4' | O4' | C1' | N1 | 113.0° | 145.9° |
| C4' | O4' | C1' | H9 | 120.7° | 93.2° |
| O4' | C4' | C3' | H12 | 82.6° | 81.2° |
| O4' | C4' | C5' | H15 | 177.0° | 169.2° |
| O4' | C4' | C5' | H16 | 62.6° | 49.1° |
| C3' | C2' | C1' | O4' | 21.7° | 2.0° |
| C3' | C2' | C1' | H10 | 119.1° | 118.7° |
| C3' | C2' | C1' | H11 | 119.0° | 118.8° |
| C3' | C2' | C1' | N1 | 97.7° | 121.5° |
| C3' | C2' | C1' | H9 | 143.1° | 117.6° |
| C3' | C2' | H10 | H11 | 122.7° | 122.7° |
| C2' | C3' | O3' | H13 | 66.3° | 61.4° |
| C2' | C3' | C4' | H14 | 83.1° | 81.4° |
| O4' | C1' | C2' | N1 | 119.5° | 119.5° |
| O4' | C1' | C2' | H9 | 121.3° | 119.5° |
| O4' | C1' | N1 | H9 | 126.8° | 121.0° |
| O4' | C1' | N1 | C6 | 27.4° | 126.7° |
| O4' | C1' | N1 | C2 | 154.8° | 52.8° |
| O4' | C1' | C2' | H10 | 140.8° | 120.6° |
| O4' | C1' | C2' | H11 | 97.3° | 116.8° |
| C1' | O4' | C4' | H14 | 94.7° | 78.6° |
| C2' | C1' | N1 | H9 | 118.8° | 121.0° |
| C2' | C1' | N1 | C6 | 87.0° | 115.3° |
| C2' | C1' | N1 | C2 | 90.8° | 65.2° |
| C1' | C2' | H10 | H11 | 122.7° | 122.6° |
| C1' | C2' | C3' | H12 | 82.9° | 97.3° |
| C32 | C33 | C34 | H6 | 180.0° | 179.6° |
| C33 | C32 | C31 | H7 | 180.0° | 179.6° |
| C32 | C33 | C34 | C37 | 179.5° | 179.8° |
| C32 | C33 | C34 | C35 | 0.6° | 0.2° |
| C33 | C32 | C31 | C30 | 179.4° | 179.8° |
| C33 | C32 | C31 | C36 | 1.0° | 0.4° |
| C34 | C33 | C32 | C31 | 0.0° | 0.4° |
| C33 | C34 | C37 | C38 | 5.6° | 109.6° |
| C33 | C34 | C37 | C35 | 178.9° | 179.9° |
| C33 | C34 | C35 | C36 | 0.3° | 0.1° |
| C33 | C34 | C35 | H4 | 179.7° | 180.0° |
| C34 | C33 | C32 | H7 | 180.0° | 180.0° |
| C1' | N1 | C6 | C2 | 177.7° | 179.4° |
| C1' | N1 | C6 | C5 | 178.2° | 180.0° |
| C1' | N1 | C2 | O2 | 2.3° | 0.3° |
| C1' | N1 | C2 | N3 | 178.5° | 179.9° |
| C1' | N1 | C6 | H8 | 1.8° | 0.5° |
| N1 | C1' | C2' | H10 | 21.4° | 119.9° |
| N1 | C1' | C2' | H11 | 143.2° | 2.7° |
| C32 | C31 | C30 | C36 | 178.4° | 179.7° |
| C32 | C31 | C30 | C29 | 65.3° | 117.5° |
| C32 | C31 | C36 | C35 | 1.3° | 0.2° |
| C32 | C31 | C36 | H3 | 178.7° | 179.7° |
| C31 | C32 | C33 | H6 | 180.0° | 180.0° |
| C38 | C37 | C34 | C35 | 175.5° | 70.5° |
| C37 | C34 | C35 | C36 | 179.1° | 180.0° |
| C37 | C34 | C35 | H4 | 0.8° | 0.1° |
| C34 | C37 | C38 | H5 | 47.4° | 164.7° |
| C37 | C34 | C33 | H6 | 0.5° | 0.2° |
| C34 | C35 | C36 | C31 | 0.7° | 0.0° |
| C34 | C35 | C36 | H4 | 180.0° | 179.9° |
| C34 | C35 | C36 | H3 | 179.3° | 180.0° |
| C35 | C34 | C33 | H6 | 179.4° | 179.8° |
| N1 | C6 | C5 | H8 | 180.0° | 179.4° |
| N1 | C6 | C5 | C29 | 179.6° | 179.7° |
| N1 | C6 | C5 | C4 | 0.1° | 0.3° |
| C6 | N1 | C2 | O2 | 179.7° | 179.7° |
| C6 | N1 | C2 | N3 | 0.6° | 0.7° |
| C6 | N1 | C1' | H9 | 154.2° | 5.7° |
| C5 | C6 | N1 | C2 | 0.4° | 0.6° |
| C6 | C5 | C29 | C30 | 72.8° | 150.9° |
| C6 | C5 | C29 | C4 | 179.4° | 180.0° |
| C6 | C5 | C4 | N3 | 0.6° | 0.0° |
| C6 | C5 | C4 | N4 | 179.8° | 180.0° |
| N1 | C2 | O2 | N3 | 179.2° | 179.7° |
| N1 | C2 | N3 | C4 | 0.1° | 0.4° |
| C2 | N1 | C6 | H8 | 179.6° | 180.0° |
| C2 | N1 | C1' | H9 | 27.9° | 173.7° |
| C31 | C30 | C29 | C5 | 112.9° | 146.4° |
| C30 | C31 | C36 | C35 | 179.7° | 179.9° |
| C30 | C31 | C36 | H3 | 0.3° | 0.0° |
| C30 | C31 | C32 | H7 | 0.6° | 0.2° |
| C36 | C31 | C30 | C29 | 116.3° | 62.8° |
| C31 | C36 | C35 | H3 | 180.0° | 179.9° |
| C31 | C36 | C35 | H4 | 179.3° | 180.0° |
| C36 | C31 | C32 | H7 | 179.0° | 179.9° |
| C30 | C29 | C5 | C4 | 106.7° | 29.2° |
| C29 | C5 | C4 | N3 | 179.9° | 180.0° |
| C29 | C5 | C4 | N4 | 0.8° | 0.1° |
| C29 | C5 | C6 | H8 | 0.4° | 0.3° |
| C5 | C4 | N3 | C2 | 0.5° | 0.0° |
| C5 | C4 | N3 | N4 | 179.2° | 180.0° |
| C5 | C4 | N4 | H1 | 179.2° | 179.9° |
| C5 | C4 | N4 | H2 | 0.8° | 0.1° |
| C4 | C5 | C6 | H8 | 179.9° | 179.7° |
| O2 | C2 | N3 | C4 | 179.3° | 180.0° |
| C2 | N3 | C4 | N4 | 179.7° | 179.9° |
| N3 | C4 | N4 | H1 | 0.0° | 0.1° |
| N3 | C4 | N4 | H2 | 180.0° | 180.0° |
| C4 | N4 | H1 | H2 | 180.0° | 179.9° |
| H3 | C36 | C35 | H4 | 0.7° | 0.1° |
| H6 | C33 | C32 | H7 | 0.0° | 0.4° |
| H9 | C1' | C2' | H10 | 97.9° | 1.1° |
| H9 | C1' | C2' | H11 | 24.0° | 123.7° |
| H10 | C2' | C3' | H12 | 36.1° | 144.0° |
| H11 | C2' | C3' | H12 | 158.0° | 21.4° |
| H12 | C3' | O3' | H13 | 56.7° | 62.1° |
| H12 | C3' | C4' | H14 | 160.7° | 160.4° |
| H14 | C4' | C5' | H15 | 62.3° | 67.9° |
| H14 | C4' | C5' | H16 | 58.1° | 172.0° |
