0O2
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| O1G | PG | doub | 1.48Å | 1.51Å | |
| O2A | PA | doub | 1.48Å | 1.50Å | |
| PG | O3B | sing | 1.61Å | 1.60Å | |
| PG | O2G | sing | 1.61Å | 1.52Å | |
| PG | O3G | sing | 1.61Å | 1.51Å | |
| O3B | PB | sing | 1.61Å | 1.59Å | |
| O3A | PA | sing | 1.61Å | 1.59Å | |
| O3A | PB | sing | 1.61Å | 1.58Å | |
| O2B | PB | doub | 1.48Å | 1.51Å | |
| O1A | PA | sing | 1.61Å | 1.50Å | |
| PA | O5' | sing | 1.61Å | 1.59Å | |
| PB | O1B | sing | 1.61Å | 1.51Å | |
| O5' | C5' | sing | 1.43Å | 1.41Å | |
| C5' | C4' | sing | 1.53Å | 1.48Å | |
| C4' | O4' | sing | 1.44Å | 1.50Å | |
| C4' | C3' | sing | 1.54Å | 1.48Å | |
| O4' | C1' | sing | 1.44Å | 1.49Å | |
| O2C | PC | doub | 1.48Å | 1.50Å | |
| C8 | N7 | doub | 1.30Å | 1.34Å | Aromatic |
| C8 | N9 | sing | 1.37Å | 1.34Å | Aromatic |
| C3' | C2' | sing | 1.55Å | 1.47Å | |
| C3' | O3' | sing | 1.43Å | 1.46Å | |
| N7 | C5 | sing | 1.36Å | 1.34Å | Aromatic |
| C1' | N9 | sing | 1.46Å | 1.41Å | |
| C1' | C2' | sing | 1.55Å | 1.49Å | |
| N9 | C4 | sing | 1.37Å | 1.36Å | Aromatic |
| C2' | O2' | sing | 1.43Å | 1.46Å | |
| O2D | PD | doub | 1.48Å | 1.52Å | |
| C5 | C4 | doub | 1.40Å | 1.41Å | Aromatic |
| C5 | C6 | sing | 1.41Å | 1.39Å | |
| PC | O3' | sing | 1.61Å | 1.60Å | |
| PC | O3C | sing | 1.61Å | 1.60Å | |
| PC | O1C | sing | 1.61Å | 1.48Å | |
| C4 | N3 | sing | 1.34Å | 1.35Å | |
| O6 | C6 | doub | 1.22Å | 1.23Å | |
| C6 | N1 | sing | 1.35Å | 1.34Å | |
| O1D | PD | sing | 1.61Å | 1.48Å | |
| O3C | PD | sing | 1.61Å | 1.60Å | |
| N3 | C2 | doub | 1.32Å | 1.35Å | |
| PD | O3D | sing | 1.61Å | 1.50Å | |
| N1 | C2 | sing | 1.36Å | 1.34Å | |
| C2 | N2 | sing | 1.37Å | 1.41Å | |
| O1D | H1 | sing | 0.97Å | 0.95Å | |
| O3D | H2 | sing | 0.97Å | 0.95Å | |
| O2G | H3 | sing | 0.97Å | 0.95Å | |
| O3G | H4 | sing | 0.97Å | 0.95Å | |
| O1B | H5 | sing | 0.97Å | 0.95Å | |
| O1A | H6 | sing | 0.97Å | 0.95Å | |
| C5' | H7 | sing | 1.09Å | 1.10Å | |
| C5' | H8 | sing | 1.09Å | 1.10Å | |
| C4' | H9 | sing | 1.09Å | 1.10Å | |
| C3' | H10 | sing | 1.09Å | 1.10Å | |
| C2' | H11 | sing | 1.09Å | 1.10Å | |
| O2' | H12 | sing | 0.97Å | 0.95Å | |
| C1' | H13 | sing | 1.09Å | 1.10Å | |
| C8 | H14 | sing | 1.08Å | 1.08Å | |
| N2 | H15 | sing | 0.97Å | 1.00Å | |
| N2 | H16 | sing | 0.97Å | 1.00Å | |
| O1C | H18 | sing | 0.97Å | 0.95Å | |
| N1 | H19 | sing | 0.97Å | 1.00Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| O1G | PG | O3B | 109.4° | 109.5° |
| O1G | PG | O2G | 108.9° | 109.5° |
| O1G | PG | O3G | 109.5° | 109.5° |
| O2A | PA | O3A | 98.0° | 109.4° |
| O2A | PA | O1A | 113.1° | 109.5° |
| O2A | PA | O5' | 110.8° | 109.5° |
| O3B | PG | O2G | 108.1° | 109.5° |
| O3B | PG | O3G | 111.5° | 109.5° |
| PG | O3B | PB | 123.4° | 134.0° |
| O2G | PG | O3G | 109.6° | 109.5° |
| PG | O2G | H3 | 109.5° | 114.0° |
| PG | O3G | H4 | 109.5° | 114.0° |
| O3B | PB | O3A | 105.3° | 109.5° |
| O3B | PB | O2B | 110.6° | 109.5° |
| O3B | PB | O1B | 108.4° | 109.5° |
| PA | O3A | PB | 129.3° | 134.1° |
| O3A | PA | O1A | 114.6° | 109.5° |
| O3A | PA | O5' | 110.9° | 109.5° |
| O3A | PB | O2B | 110.7° | 109.5° |
| O3A | PB | O1B | 107.2° | 109.5° |
| O2B | PB | O1B | 114.1° | 109.4° |
| O1A | PA | O5' | 109.1° | 109.5° |
| PA | O1A | H6 | 109.5° | 114.0° |
| PA | O5' | C5' | 117.1° | 123.0° |
| PB | O1B | H5 | 109.5° | 114.0° |
| O5' | C5' | C4' | 111.5° | 109.5° |
| O5' | C5' | H7 | 109.0° | 109.5° |
| O5' | C5' | H8 | 108.9° | 109.5° |
| C5' | C4' | O4' | 109.7° | 109.8° |
| C5' | C4' | C3' | 113.7° | 109.9° |
| C4' | C5' | H7 | 108.9° | 109.5° |
| C4' | C5' | H8 | 109.0° | 109.4° |
| C5' | C4' | H9 | 108.7° | 109.9° |
| O4' | C4' | C3' | 107.3° | 107.3° |
| C4' | O4' | C1' | 104.6° | 106.9° |
| O4' | C4' | H9 | 108.5° | 109.8° |
| C4' | C3' | C2' | 105.9° | 104.2° |
| C4' | C3' | O3' | 105.3° | 110.4° |
| C3' | C4' | H9 | 108.8° | 110.0° |
| C4' | C3' | H10 | 110.8° | 110.5° |
| O4' | C1' | N9 | 109.7° | 110.6° |
| O4' | C1' | C2' | 103.4° | 103.5° |
| O4' | C1' | H13 | 109.1° | 110.6° |
| O2C | PC | O3' | 114.5° | 109.5° |
| O2C | PC | O3C | 110.7° | 109.5° |
| O2C | PC | O1C | 114.2° | 109.5° |
| N7 | C8 | N9 | 111.6° | 109.8° |
| C8 | N7 | C5 | 107.6° | 109.4° |
| N7 | C8 | H14 | 124.2° | 125.2° |
| C8 | N9 | C1' | 128.3° | 126.3° |
| C8 | N9 | C4 | 105.7° | 107.4° |
| N9 | C8 | H14 | 124.2° | 125.0° |
| C2' | C3' | O3' | 112.4° | 110.5° |
| C3' | C2' | C1' | 105.3° | 102.1° |
| C3' | C2' | O2' | 114.4° | 110.9° |
| C2' | C3' | H10 | 111.0° | 110.5° |
| C3' | C2' | H11 | 108.5° | 110.9° |
| C3' | O3' | PC | 119.1° | 123.0° |
| O3' | C3' | H10 | 111.1° | 110.6° |
| N7 | C5 | C4 | 106.7° | 107.3° |
| N7 | C5 | C6 | 135.6° | 134.1° |
| N9 | C1' | C2' | 114.9° | 110.6° |
| C1' | N9 | C4 | 126.1° | 126.3° |
| N9 | C1' | H13 | 110.2° | 110.5° |
| C1' | C2' | O2' | 111.5° | 110.9° |
| C1' | C2' | H11 | 108.3° | 110.9° |
| C2' | C1' | H13 | 109.1° | 110.8° |
| N9 | C4 | C5 | 108.5° | 106.1° |
| N9 | C4 | N3 | 130.7° | 134.2° |
| O2' | C2' | H11 | 108.6° | 110.8° |
| C2' | O2' | H12 | 109.5° | 114.0° |
| O2D | PD | O1D | 111.4° | 109.4° |
| O2D | PD | O3C | 109.7° | 109.5° |
| O2D | PD | O3D | 109.8° | 109.5° |
| C4 | C5 | C6 | 117.8° | 118.6° |
| C5 | C4 | N3 | 120.8° | 119.7° |
| C5 | C6 | O6 | 122.7° | 120.9° |
| C5 | C6 | N1 | 118.8° | 118.3° |
| O3' | PC | O3C | 101.4° | 109.4° |
| O3' | PC | O1C | 104.0° | 109.4° |
| O3C | PC | O1C | 111.2° | 109.4° |
| PC | O3C | PD | 129.5° | 133.9° |
| PC | O1C | H18 | 109.5° | 114.0° |
| C4 | N3 | C2 | 119.3° | 121.1° |
| O6 | C6 | N1 | 118.4° | 120.8° |
| C6 | N1 | C2 | 122.4° | 120.4° |
| C6 | N1 | H19 | 118.8° | 119.8° |
| O1D | PD | O3C | 104.8° | 109.4° |
| O1D | PD | O3D | 113.0° | 109.5° |
| PD | O1D | H1 | 109.5° | 114.0° |
| O3C | PD | O3D | 108.0° | 109.5° |
| N3 | C2 | N1 | 121.0° | 121.9° |
| N3 | C2 | N2 | 117.3° | 119.0° |
| PD | O3D | H2 | 109.5° | 114.0° |
| N1 | C2 | N2 | 121.7° | 119.1° |
| C2 | N1 | H19 | 118.8° | 119.8° |
| C2 | N2 | H15 | 120.0° | 120.0° |
| C2 | N2 | H16 | 120.0° | 120.0° |
| H7 | C5' | H8 | 109.5° | 109.5° |
| H15 | N2 | H16 | 120.0° | 120.0° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| O1G | PG | O3B | O2G | 118.4° | 120.0° |
| O1G | PG | O3B | O3G | 121.2° | 120.0° |
| O1G | PG | O2G | O3G | 119.7° | 120.0° |
| O1G | PG | O3B | PB | 110.7° | 45.0° |
| O1G | PG | O2G | H3 | 0.0° | 180.0° |
| O1G | PG | O3G | H4 | 0.0° | 60.0° |
| O2A | PA | O3A | O1A | 120.0° | 119.9° |
| O2A | PA | O3A | O5' | 115.9° | 120.0° |
| O2A | PA | O3A | PB | 155.0° | 40.0° |
| O2A | PA | O1A | O5' | 123.8° | 120.0° |
| O2A | PA | O5' | C5' | 61.0° | 55.0° |
| O2A | PA | O1A | H6 | 0.0° | 180.0° |
| O3B | PG | O2G | O3G | 121.6° | 120.0° |
| PG | O3B | PB | O3A | 52.2° | 160.0° |
| PG | O3B | PB | O2B | 171.9° | 40.0° |
| PG | O3B | PB | O1B | 62.3° | 80.0° |
| O3B | PG | O2G | H3 | 118.7° | 60.0° |
| O3B | PG | O3G | H4 | 121.1° | 180.0° |
| O2G | PG | O3B | PB | 130.9° | 75.0° |
| O2G | PG | O3G | H4 | 119.4° | 60.0° |
| O3G | PG | O3B | PB | 10.4° | 165.0° |
| O3G | PG | O2G | H3 | 119.7° | 60.0° |
| O3B | PB | O3A | PA | 164.1° | 165.0° |
| O3B | PB | O3A | O2B | 119.6° | 120.0° |
| O3B | PB | O3A | O1B | 115.3° | 120.0° |
| O3B | PB | O2B | O1B | 122.5° | 120.0° |
| O3B | PB | O1B | H5 | 123.7° | 60.1° |
| PA | O3A | PB | O2B | 44.5° | 45.0° |
| O3A | PA | O1A | O5' | 125.1° | 120.1° |
| PA | O3A | PB | O1B | 80.7° | 75.0° |
| O3A | PA | O5' | C5' | 46.7° | 175.0° |
| O3A | PA | O1A | H6 | 111.1° | 60.1° |
| O3A | PB | O2B | O1B | 121.1° | 120.0° |
| PB | O3A | PA | O1A | 35.1° | 80.0° |
| PB | O3A | PA | O5' | 89.0° | 160.0° |
| O3A | PB | O1B | H5 | 123.1° | 60.0° |
| O2B | PB | O1B | H5 | 0.0° | 180.0° |
| O1A | PA | O5' | C5' | 173.9° | 65.0° |
| PA | O5' | C5' | C4' | 177.4° | 179.9° |
| O5' | PA | O1A | H6 | 123.8° | 60.0° |
| PA | O5' | C5' | H7 | 57.1° | 60.0° |
| PA | O5' | C5' | H8 | 62.3° | 60.0° |
| O5' | C5' | C4' | H7 | 120.3° | 120.0° |
| O5' | C5' | C4' | H8 | 120.3° | 120.0° |
| O5' | C5' | C4' | O4' | 60.3° | 66.4° |
| O5' | C5' | C4' | C3' | 59.8° | 175.7° |
| O5' | C5' | H7 | H8 | 119.0° | 120.0° |
| O5' | C5' | C4' | H9 | 178.8° | 54.5° |
| C5' | C4' | O4' | C3' | 124.0° | 119.4° |
| C5' | C4' | O4' | H9 | 118.6° | 121.0° |
| C5' | C4' | C3' | H9 | 121.3° | 121.2° |
| C5' | C4' | O4' | C1' | 140.1° | 145.9° |
| C5' | C4' | C3' | C2' | 114.8° | 121.4° |
| C5' | C4' | C3' | O3' | 126.0° | 119.9° |
| C4' | C5' | H7 | H8 | 119.1° | 120.0° |
| C5' | C4' | C3' | H10 | 5.7° | 2.8° |
| O4' | C4' | C3' | H9 | 117.2° | 119.5° |
| O4' | C4' | C3' | C2' | 6.7° | 2.1° |
| O4' | C4' | C3' | O3' | 112.5° | 120.7° |
| C4' | O4' | C1' | N9 | 155.3° | 158.6° |
| C4' | O4' | C1' | C2' | 32.3° | 40.1° |
| O4' | C4' | C5' | H7 | 179.3° | 53.6° |
| O4' | C4' | C5' | H8 | 59.9° | 173.6° |
| O4' | C4' | C3' | H10 | 127.2° | 116.6° |
| C4' | O4' | C1' | H13 | 83.8° | 78.6° |
| C3' | C4' | O4' | C1' | 16.1° | 26.5° |
| C4' | C3' | C2' | O3' | 114.5° | 118.6° |
| C4' | C3' | C2' | H10 | 120.3° | 118.7° |
| C4' | C3' | O3' | H10 | 120.1° | 122.6° |
| C4' | C3' | C2' | C1' | 27.2° | 20.9° |
| C4' | C3' | C2' | O2' | 150.0° | 139.0° |
| C4' | C3' | O3' | PC | 103.2° | 120.1° |
| C3' | C4' | C5' | H7 | 60.5° | 64.2° |
| C3' | C4' | C5' | H8 | 179.9° | 55.7° |
| C4' | C3' | C2' | H11 | 88.6° | 97.4° |
| O4' | C1' | N9 | C8 | 73.8° | 23.9° |
| O4' | C1' | C2' | C3' | 37.2° | 37.0° |
| O4' | C1' | N9 | C2' | 116.0° | 114.1° |
| O4' | C1' | N9 | H13 | 120.2° | 122.8° |
| O4' | C1' | C2' | H13 | 116.1° | 118.6° |
| O4' | C1' | N9 | C4 | 104.8° | 156.5° |
| O4' | C1' | C2' | O2' | 161.8° | 155.2° |
| C1' | O4' | C4' | H9 | 101.3° | 93.1° |
| O4' | C1' | C2' | H11 | 78.7° | 81.2° |
| O2C | PC | O3' | C3' | 47.3° | 54.9° |
| O2C | PC | O3' | O3C | 119.2° | 120.1° |
| O2C | PC | O3' | O1C | 125.3° | 120.0° |
| O2C | PC | O3C | O1C | 128.0° | 120.0° |
| O2C | PC | O3C | PD | 49.0° | 45.0° |
| O2C | PC | O1C | H18 | 0.0° | 180.0° |
| N7 | C8 | N9 | H14 | 180.0° | 180.0° |
| N7 | C8 | N9 | C1' | 179.7° | 180.0° |
| N7 | C8 | N9 | C4 | 1.5° | 0.3° |
| C8 | N7 | C5 | C4 | 0.8° | 0.3° |
| C8 | N7 | C5 | C6 | 179.3° | 180.0° |
| N9 | C8 | N7 | C5 | 1.4° | 0.0° |
| C8 | N9 | C1' | C4 | 178.6° | 179.6° |
| C8 | N9 | C1' | C2' | 42.1° | 90.2° |
| C8 | N9 | C4 | C5 | 0.9° | 0.4° |
| C8 | N9 | C4 | N3 | 179.0° | 179.5° |
| C8 | N9 | C1' | H13 | 165.9° | 146.8° |
| C2' | C3' | O3' | H10 | 125.1° | 122.6° |
| C3' | C2' | C1' | N9 | 156.7° | 155.5° |
| C3' | C2' | C1' | O2' | 124.6° | 118.2° |
| C3' | C2' | C1' | H11 | 115.9° | 118.2° |
| C3' | C2' | O2' | H11 | 121.4° | 123.7° |
| C2' | C3' | O3' | PC | 141.9° | 125.2° |
| C2' | C3' | C4' | H9 | 123.9° | 117.4° |
| C3' | C2' | O2' | H12 | 180.0° | 180.0° |
| C3' | C2' | C1' | H13 | 78.9° | 81.6° |
| O3' | C3' | C2' | C1' | 87.3° | 97.7° |
| O3' | C3' | C2' | O2' | 35.4° | 20.4° |
| C3' | O3' | PC | O3C | 71.9° | 175.0° |
| C3' | O3' | PC | O1C | 172.6° | 65.1° |
| O3' | C3' | C4' | H9 | 4.7° | 1.2° |
| O3' | C3' | C2' | H11 | 156.9° | 144.0° |
| N7 | C5 | C4 | N9 | 0.1° | 0.4° |
| N7 | C5 | C4 | C6 | 180.0° | 179.8° |
| N7 | C5 | C4 | N3 | 179.9° | 179.6° |
| N7 | C5 | C6 | O6 | 1.0° | 0.0° |
| N7 | C5 | C6 | N1 | 179.5° | 180.0° |
| C5 | N7 | C8 | H14 | 178.6° | 180.0° |
| N9 | C1' | C2' | H13 | 124.4° | 122.9° |
| N9 | C1' | C2' | O2' | 78.6° | 86.3° |
| C1' | N9 | C4 | C5 | 179.8° | 179.9° |
| C1' | N9 | C4 | N3 | 0.2° | 0.9° |
| N9 | C1' | C2' | H11 | 40.8° | 37.3° |
| C1' | N9 | C8 | H14 | 0.3° | 0.0° |
| C2' | C1' | N9 | C4 | 139.2° | 89.5° |
| C1' | C2' | O2' | H11 | 119.3° | 123.6° |
| C1' | C2' | C3' | H10 | 147.5° | 139.5° |
| C1' | C2' | O2' | H12 | 60.6° | 67.3° |
| N9 | C4 | C5 | N3 | 180.0° | 179.2° |
| N9 | C4 | C5 | C6 | 179.8° | 179.8° |
| N9 | C4 | N3 | C2 | 179.7° | 179.5° |
| C4 | N9 | C1' | H13 | 15.5° | 33.6° |
| C4 | N9 | C8 | H14 | 178.5° | 179.7° |
| O2' | C2' | C3' | H10 | 89.7° | 102.3° |
| O2' | C2' | C1' | H13 | 45.8° | 36.6° |
| O2D | PD | O3C | PC | 15.8° | 45.1° |
| O2D | PD | O1D | O3C | 118.6° | 120.0° |
| O2D | PD | O1D | O3D | 124.1° | 120.0° |
| O2D | PD | O3C | O3D | 119.6° | 120.1° |
| O2D | PD | O1D | H1 | 0.0° | 60.1° |
| O2D | PD | O3D | H2 | 0.0° | 180.0° |
| C4 | C5 | C6 | O6 | 178.9° | 179.7° |
| C4 | C5 | C6 | N1 | 0.5° | 0.3° |
| C5 | C4 | N3 | C2 | 0.3° | 0.6° |
| C6 | C5 | C4 | N3 | 0.2° | 0.6° |
| C5 | C6 | O6 | N1 | 179.5° | 180.0° |
| C5 | C6 | N1 | C2 | 0.4° | 0.0° |
| C5 | C6 | N1 | H19 | 179.6° | 180.0° |
| O3' | PC | O3C | O1C | 110.1° | 119.9° |
| O3' | PC | O3C | PD | 170.9° | 165.0° |
| PC | O3' | C3' | H10 | 16.8° | 2.6° |
| O3' | PC | O1C | H18 | 125.5° | 60.0° |
| PC | O3C | PD | O1D | 135.5° | 165.0° |
| PC | O3C | PD | O3D | 103.8° | 75.0° |
| O3C | PC | O1C | H18 | 126.1° | 60.0° |
| O1C | PC | O3C | PD | 79.1° | 75.1° |
| C4 | N3 | C2 | N1 | 0.5° | 0.3° |
| C4 | N3 | C2 | N2 | 180.0° | 179.7° |
| O6 | C6 | N1 | C2 | 179.1° | 180.0° |
| O6 | C6 | N1 | H19 | 0.9° | 0.0° |
| C6 | N1 | C2 | N3 | 0.1° | 0.0° |
| C6 | N1 | C2 | H19 | 180.0° | 180.0° |
| C6 | N1 | C2 | N2 | 179.6° | 180.0° |
| O1D | PD | O3C | O3D | 120.7° | 120.0° |
| O1D | PD | O3D | H2 | 125.0° | 60.0° |
| O3C | PD | O1D | H1 | 118.6° | 180.0° |
| O3C | PD | O3D | H2 | 119.6° | 60.0° |
| N3 | C2 | N1 | N2 | 179.5° | 180.0° |
| N3 | C2 | N2 | H15 | 0.0° | 180.0° |
| N3 | C2 | N2 | H16 | 180.0° | 0.1° |
| N3 | C2 | N1 | H19 | 179.9° | 180.0° |
| O3D | PD | O1D | H1 | 124.1° | 60.0° |
| N1 | C2 | N2 | H15 | 179.5° | 0.1° |
| N1 | C2 | N2 | H16 | 0.5° | 180.0° |
| C2 | N2 | H15 | H16 | 180.0° | 179.9° |
| N2 | C2 | N1 | H19 | 0.4° | 0.0° |
| H7 | C5' | C4' | H9 | 60.8° | 174.5° |
| H8 | C5' | C4' | H9 | 58.6° | 65.5° |
| H9 | C4' | C3' | H10 | 115.6° | 123.9° |
| H10 | C3' | C2' | H11 | 31.7° | 21.3° |
| H11 | C2' | O2' | H12 | 58.7° | 56.3° |
| H11 | C2' | C1' | H13 | 165.2° | 160.2° |
