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0L3

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O48C47sing1.43Å1.43Å
C47C46sing1.53Å1.52Å
C46C45sing1.53Å1.52Å
C45C44sing1.53Å1.52Å
C44C43sing1.53Å1.52Å
O1GPGdoub1.48Å1.51Å
C43C42sing1.53Å1.52Å
O3GPGsing1.61Å1.51Å
C42C41sing1.53Å1.52Å
PGO2Gsing1.61Å1.51Å
PGO3Bsing1.61Å1.61Å
O2BPBdoub1.48Å1.51Å
O2APAdoub1.48Å1.51Å
O3BPBsing1.61Å1.61Å
C41C40sing1.53Å1.52Å
PBO1Bsing1.61Å1.51Å
PBO3Asing1.61Å1.61Å
C40C39sing1.53Å1.52Å
PAO3Asing1.61Å1.61Å
PAO5'sing1.61Å1.61Å
PAO1Asing1.61Å1.51Å
C5'O5'sing1.43Å1.42Å
C5'C4'sing1.53Å1.52Å
O3'C3'sing1.43Å1.43Å
C4'C3'sing1.55Å1.52Å
C4'O4'sing1.44Å1.43Å
C39C37sing1.51Å1.51Å
C3'C2'sing1.54Å1.51Å
O4'C1'sing1.44Å1.43Å
C37N36sing1.35Å1.33Å
C37O38doub1.21Å1.22Å
N36C35sing1.46Å1.46Å
C2'C1'sing1.55Å1.52Å
C1'N9sing1.46Å1.48Å
C35C34sing1.53Å1.52Å
C8N9sing1.37Å1.36ÅAromatic
C8C7doub1.36Å1.38ÅAromatic
N9C4sing1.37Å1.35ÅAromatic
C34C33sing1.53Å1.52Å
C7C31sing1.43Å1.34Å
C7C5sing1.47Å1.47ÅAromatic
C31C32trip1.17Å1.18Å
C4N3doub1.33Å1.36ÅAromatic
C4C5sing1.41Å1.47ÅAromatic
C32C33sing1.47Å1.47Å
N3C2sing1.32Å1.35ÅAromatic
C5C6doub1.40Å1.48ÅAromatic
C2N1doub1.32Å1.35ÅAromatic
C6N1sing1.33Å1.35ÅAromatic
C6N6sing1.38Å1.36Å
O3GH1sing0.97Å0.95Å
O2GH2sing0.97Å0.95Å
O1BH3sing0.97Å0.95Å
O1AH4sing0.97Å0.95Å
C5'H5sing1.09Å1.10Å
C5'H6sing1.09Å1.10Å
C4'H7sing1.09Å1.10Å
C3'H8sing1.09Å1.10Å
O3'H9sing0.97Å0.95Å
C2'H10sing1.09Å1.10Å
C2'H11sing1.09Å1.10Å
C1'H12sing1.09Å1.10Å
C2H13sing1.08Å1.08Å
N6H14sing0.97Å1.00Å
N6H15sing0.97Å1.00Å
C8H16sing1.08Å1.08Å
C33H17sing1.09Å1.10Å
C33H18sing1.09Å1.10Å
C34H19sing1.09Å1.10Å
C34H20sing1.09Å1.10Å
C35H21sing1.09Å1.10Å
C35H22sing1.09Å1.10Å
N36H23sing0.97Å1.00Å
C39H24sing1.09Å1.10Å
C39H25sing1.09Å1.10Å
C40H26sing1.09Å1.10Å
C40H27sing1.09Å1.10Å
C41H28sing1.09Å1.10Å
C41H29sing1.09Å1.10Å
C42H30sing1.09Å1.10Å
C42H31sing1.09Å1.10Å
C43H32sing1.09Å1.10Å
C43H33sing1.09Å1.10Å
C44H34sing1.09Å1.10Å
C44H35sing1.09Å1.10Å
C45H36sing1.09Å1.10Å
C45H37sing1.09Å1.10Å
C46H38sing1.09Å1.10Å
C46H39sing1.09Å1.10Å
C47H40sing1.09Å1.10Å
C47H41sing1.09Å1.10Å
O48H42sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O48C47C46109.5°109.4°
O48C47H40109.5°109.5°
O48C47H41109.5°109.5°
C47O48H42109.5°114.0°
C47C46C45111.6°109.4°
C47C46H38108.9°109.5°
C47C46H39109.0°109.5°
C46C47H40109.5°109.4°
C46C47H41109.5°109.5°
C46C45C44110.4°109.5°
C46C45H36109.2°109.5°
C46C45H37109.2°109.5°
C45C46H38109.0°109.5°
C45C46H39108.9°109.5°
C45C44C43111.1°109.4°
C45C44H34109.1°109.5°
C45C44H35109.1°109.4°
C44C45H36109.2°109.5°
C44C45H37109.3°109.5°
C44C43C42110.6°109.4°
C44C43H32109.2°109.5°
C44C43H33109.2°109.5°
C43C44H34109.1°109.5°
C43C44H35109.1°109.5°
O1GPGO3G115.6°109.5°
O1GPGO2G113.6°109.5°
O1GPGO3B103.6°109.5°
C43C42C41111.7°109.4°
C43C42H30108.9°109.4°
C43C42H31108.9°109.5°
C42C43H32109.2°109.5°
C42C43H33109.2°109.5°
O3GPGO2G113.7°109.5°
O3GPGO3B104.3°109.5°
PGO3GH1109.5°114.0°
C42C41C40111.0°109.5°
C42C41H28109.1°109.5°
C42C41H29109.1°109.5°
C41C42H30108.9°109.5°
C41C42H31108.9°109.5°
O2GPGO3B104.3°109.5°
PGO2GH2109.5°114.0°
PGO3BPB121.5°134.0°
O2BPBO3B110.5°109.5°
O2BPBO1B118.9°109.5°
O2BPBO3A110.1°109.5°
O2APAO3A108.7°109.4°
O2APAO5'110.5°109.5°
O2APAO1A119.7°109.5°
O3BPBO1B107.1°109.5°
O3BPBO3A101.4°109.4°
C41C40C39110.5°109.4°
C41C40H26109.2°109.5°
C41C40H27109.2°109.4°
C40C41H28109.1°109.5°
C40C41H29109.1°109.5°
O1BPBO3A107.4°109.5°
PBO1BH3109.5°114.0°
PBO3APA120.1°134.0°
C40C39C37110.5°109.5°
C40C39H24109.2°109.5°
C40C39H25109.2°109.5°
C39C40H26109.2°109.5°
C39C40H27109.2°109.5°
O3APAO5'100.3°109.5°
O3APAO1A107.7°109.4°
O5'PAO1A108.1°109.5°
PAO5'C5'121.4°123.0°
PAO1AH4109.5°114.0°
O5'C5'C4'107.4°109.5°
O5'C5'H5110.0°109.5°
O5'C5'H6110.0°109.5°
C5'C4'C3'110.9°110.4°
C5'C4'O4'110.6°110.4°
C4'C5'H5110.0°109.5°
C4'C5'H6110.0°109.5°
C5'C4'H7109.5°110.3°
O3'C3'C4'112.3°110.5°
O3'C3'C2'111.3°110.5°
O3'C3'H8110.6°110.5°
C3'O3'H9109.5°114.0°
C3'C4'O4'105.4°104.8°
C4'C3'C2'103.8°104.0°
C3'C4'H7109.6°110.3°
C4'C3'H8109.3°110.5°
C4'O4'C1'110.3°105.3°
O4'C4'H7110.8°110.5°
C39C37N36117.4°120.0°
C39C37O38119.9°120.0°
C37C39H24109.2°109.5°
C37C39H25109.2°109.4°
C3'C2'C1'104.2°104.1°
C2'C3'H8109.4°110.5°
C3'C2'H10110.7°110.5°
C3'C2'H11110.8°110.5°
O4'C1'C2'107.4°104.8°
O4'C1'N9109.5°110.4°
O4'C1'H12111.6°110.3°
N36C37O38122.7°120.0°
C37N36C35121.3°120.0°
C37N36H23119.3°120.0°
N36C35C34112.8°109.5°
N36C35H21108.7°109.5°
N36C35H22108.6°109.5°
C35N36H23119.3°120.0°
C2'C1'N9107.1°110.4°
C1'C2'H10110.8°110.5°
C1'C2'H11110.8°110.5°
C2'C1'H12110.3°110.3°
C1'N9C8124.0°124.8°
C1'N9C4123.9°124.8°
N9C1'H12110.8°110.5°
C35C34C33112.6°109.5°
C35C34H19108.7°109.5°
C35C34H20108.7°109.4°
C34C35H21108.6°109.5°
C34C35H22108.6°109.4°
N9C8C7107.2°109.6°
C8N9C4112.2°110.3°
N9C8H16126.4°125.2°
C8C7C31125.0°126.8°
C8C7C5110.7°106.4°
C7C8H16126.4°125.2°
N9C4N3134.3°134.1°
N9C4C5108.6°107.4°
C34C33C32111.9°109.5°
C34C33H17108.9°109.5°
C34C33H18108.8°109.5°
C33C34H19108.7°109.5°
C33C34H20108.7°109.5°
C31C7C5124.3°126.8°
C7C31C32179.3°179.9°
C7C5C4101.3°106.2°
C7C5C6139.6°135.1°
C31C32C33178.2°180.0°
N3C4C5117.1°118.5°
C4N3C2121.4°120.7°
C4C5C6119.1°118.8°
C32C33H17108.8°109.5°
C32C33H18108.9°109.5°
N3C2N1124.0°122.7°
N3C2H13118.0°118.7°
C5C6N1116.7°118.4°
C5C6N6121.5°120.8°
C2N1C6121.8°121.0°
N1C2H13118.0°118.7°
N1C6N6121.8°120.9°
C6N6H14109.5°120.0°
C6N6H15109.5°120.0°
H5C5'H6109.5°109.4°
H10C2'H11109.5°110.6°
H14N6H15109.5°120.0°
H17C33H18109.5°109.5°
H19C34H20109.4°109.5°
H21C35H22109.5°109.4°
H24C39H25109.5°109.5°
H26C40H27109.5°109.5°
H28C41H29109.5°109.5°
H30C42H31109.5°109.5°
H32C43H33109.5°109.5°
H34C44H35109.5°109.4°
H36C45H37109.4°109.4°
H38C46H39109.5°109.5°
H40C47H41109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O48C47C46H40120.0°120.0°
O48C47C46H41120.0°120.0°
O48C47C46C45175.8°180.0°
O48C47C46H3855.5°60.0°
O48C47C46H3963.9°60.0°
O48C47H40H41120.0°120.0°
C47C46C45H38120.3°120.0°
C47C46C45H39120.3°120.0°
C47C46C45C44160.5°180.0°
C47C46C45H3640.3°60.0°
C47C46C45H3779.3°60.0°
C47C46H38H39119.0°120.1°
C46C47H40H41120.0°120.0°
C46C47O48H42180.0°179.9°
C46C45C44H36120.2°120.0°
C46C45C44H37120.1°120.0°
C46C45C44C4365.2°180.0°
C46C45C44H34174.6°60.0°
C46C45C44H3555.0°60.0°
C46C45H36H37119.5°120.0°
C45C46H38H39119.0°120.0°
C45C46C47H4064.2°60.1°
C45C46C47H4155.8°60.0°
C45C44C43H34120.2°120.0°
C45C44C43H35120.2°120.0°
C45C44C43C42164.7°180.0°
C45C44C43H3244.6°60.0°
C45C44C43H3375.1°60.0°
C45C44H34H35119.3°120.0°
C44C45H36H37119.6°120.0°
C44C45C46H3879.2°60.0°
C44C45C46H3940.2°60.0°
C44C43C42H32120.2°120.0°
C44C43C42H33120.2°120.0°
C44C43C42C41165.0°180.0°
C44C43C42H3044.7°60.1°
C44C43C42H3174.6°60.0°
C44C43H32H33119.5°120.0°
C43C44H34H35119.3°120.1°
C43C44C45H3654.9°60.0°
C43C44C45H37174.6°60.0°
O1GPGO3GO2G134.0°120.0°
O1GPGO3GO3B113.1°120.0°
O1GPGO2GO3B112.1°120.0°
O1GPGO3BPB132.1°40.0°
O1GPGO3GH1104.5°60.0°
O1GPGO2GH20.0°179.9°
C43C42C41H30120.4°119.9°
C43C42C41H31120.3°120.0°
C43C42C41C4071.1°180.0°
C43C42C41H28168.7°60.0°
C43C42C41H2949.1°60.0°
C43C42H30H31119.0°120.1°
C42C43H32H33119.5°120.1°
C42C43C44H3475.0°60.0°
C42C43C44H3544.5°60.0°
O3GPGO2GO3B113.0°120.0°
O3GPGO3BPB10.8°160.0°
O3GPGO2GH2134.9°59.9°
C42C41C40H28120.2°120.0°
C42C41C40H29120.2°120.0°
C42C41C40C39151.9°180.0°
C42C41C40H2688.0°60.0°
C42C41C40H2731.7°60.0°
C42C41H28H29119.3°120.0°
C41C42H30H31119.0°120.0°
C41C42C43H3274.8°60.0°
C41C42C43H3344.9°60.0°
O2GPGO3BPB108.8°80.0°
O2GPGO3GH1121.5°60.0°
PGO3BPBO2B35.2°45.0°
PGO3BPBO1B166.1°75.0°
PGO3BPBO3A81.5°165.0°
O3BPGO3GH18.6°180.0°
O3BPGO2GH2112.1°60.1°
O2BPBO3BO1B130.9°120.0°
O2BPBO3BO3A116.7°120.0°
O2BPBO1BO3A125.7°120.0°
O2BPBO3APA10.2°40.0°
O2BPBO1BH30.0°180.0°
O2APAO3APB30.8°40.0°
O2APAO3AO5'116.0°120.0°
O2APAO3AO1A131.1°120.0°
O2APAO5'O1A132.8°120.0°
O2APAO5'C5'1.9°55.0°
O2APAO1AH40.0°180.0°
O3BPBO1BO3A108.2°120.0°
O3BPBO3APA127.2°160.0°
O3BPBO1BH3126.1°60.0°
C41C40C39H26120.2°120.0°
C41C40C39H27120.2°119.9°
C41C40C39C37163.6°180.0°
C41C40C39H2476.3°60.0°
C41C40C39H2543.4°60.1°
C41C40H26H27119.5°119.9°
C40C41H28H29119.3°120.0°
C40C41C42H3049.2°60.0°
C40C41C42H31168.5°60.0°
O1BPBO3APA120.6°80.0°
PBO3APAO5'85.2°160.0°
PBO3APAO1A162.0°79.9°
O3APBO1BH3125.7°60.0°
C40C39C37H24120.1°120.1°
C40C39C37H25120.2°120.0°
C40C39C37N3686.5°180.0°
C40C39C37O3893.1°0.0°
C40C39H24H25119.6°120.1°
C39C40H26H27119.5°120.1°
C39C40C41H2831.7°60.0°
C39C40C41H2987.9°60.0°
O3APAO5'O1A112.6°120.0°
O3APAO5'C5'112.7°175.0°
O3APAO1AH4124.7°60.1°
PAO5'C5'C4'155.2°180.0°
O5'PAO1AH4127.7°60.0°
PAO5'C5'H535.5°60.0°
PAO5'C5'H685.2°60.0°
O1APAO5'C5'134.7°65.0°
O5'C5'C4'H5119.7°120.0°
O5'C5'C4'H6119.7°120.1°
O5'C5'C4'C3'47.9°175.0°
O5'C5'C4'O4'68.7°69.6°
O5'C5'H5H6121.0°120.0°
O5'C5'C4'H7168.9°52.8°
C5'C4'C3'O3'89.9°98.5°
C5'C4'C3'O4'119.7°118.9°
C5'C4'C3'H7121.0°122.2°
C5'C4'O4'H7121.7°122.3°
C5'C4'C3'C2'149.8°142.8°
C5'C4'O4'C1'142.6°159.3°
C4'C5'H5H6120.9°120.0°
C5'C4'C3'H833.2°24.2°
O3'C3'C4'C2'120.3°118.7°
O3'C3'C4'H8123.1°122.7°
O3'C3'C4'O4'150.4°142.6°
O3'C3'C2'H8122.4°122.7°
O3'C3'C2'C1'147.1°118.7°
O3'C3'C4'H731.1°23.7°
O3'C3'C2'H1093.8°122.7°
O3'C3'C2'H1127.9°0.0°
C3'C4'O4'H7118.4°118.8°
C4'C3'C2'H8116.6°118.6°
C3'C4'O4'C1'22.7°40.5°
C4'C3'C2'C1'26.1°0.0°
C3'C4'C5'H571.8°65.0°
C3'C4'C5'H6167.6°54.9°
C4'C3'O3'H9180.0°180.0°
C4'C3'C2'H10145.3°118.6°
C4'C3'C2'H1193.0°118.7°
O4'C4'C3'C2'30.1°23.9°
C4'O4'C1'C2'5.8°40.5°
C4'O4'C1'N9121.8°159.3°
O4'C4'C5'H5171.7°50.4°
O4'C4'C5'H651.0°170.3°
O4'C4'C3'H886.5°94.7°
C4'O4'C1'H12115.2°78.3°
C39C37N36O38179.7°180.0°
C39C37N36C35164.9°180.0°
C39C37N36H2315.1°0.0°
C37C39H24H25119.5°119.9°
C37C39C40H2643.4°60.0°
C37C39C40H2776.2°60.1°
C3'C2'C1'O4'13.4°23.9°
C3'C2'C1'H10119.1°118.6°
C3'C2'C1'H11119.1°118.7°
C3'C2'C1'N9104.2°142.8°
C2'C3'C4'H789.1°95.0°
C2'C3'O3'H964.2°65.3°
C3'C2'H10H11122.4°122.7°
C3'C2'C1'H12135.2°94.8°
O4'C1'C2'N9117.6°118.9°
O4'C1'C2'H12121.8°118.8°
O4'C1'N9H12123.5°122.3°
O4'C1'N9C825.8°20.0°
O4'C1'N9C4155.8°159.6°
C1'O4'C4'H795.8°78.4°
O4'C1'C2'H10132.5°94.7°
O4'C1'C2'H11105.7°142.6°
C37N36C35H23180.0°180.0°
C37N36C35C3475.1°180.0°
C37N36C35H2145.4°60.0°
C37N36C35H22164.4°60.0°
N36C37C39H2433.6°60.0°
N36C37C39H25153.3°60.0°
O38C37N36C3515.4°0.0°
O38C37N36H23164.6°180.0°
O38C37C39H24146.7°120.0°
O38C37C39H2527.0°120.0°
N36C35C34H21120.5°120.0°
N36C35C34H22120.5°120.0°
N36C35C34C33166.4°180.0°
N36C35C34H1973.1°60.0°
N36C35C34H2045.9°60.0°
N36C35H21H22118.5°120.0°
C2'C1'N9H12120.3°122.3°
C2'C1'N9C890.4°95.4°
C2'C1'N9C488.0°85.0°
C1'C2'C3'H890.5°118.6°
C1'C2'H10H11122.5°122.6°
C1'N9C8C4178.5°179.7°
C1'N9C8C7178.7°179.9°
C1'N9C4N31.3°0.1°
C1'N9C4C5179.0°179.9°
N9C1'C2'H1014.9°24.2°
N9C1'C2'H11136.7°98.5°
C1'N9C8H161.3°0.1°
C35C34C33H19120.5°120.0°
C35C34C33H20120.5°120.0°
C35C34C33C3241.2°180.0°
C35C34C33H17161.5°60.0°
C35C34C33H1879.2°60.0°
C35C34H19H20118.6°119.9°
C34C35H21H22118.5°120.0°
C34C35N36H23104.9°0.0°
N9C8C7H16180.0°179.8°
N9C8C7C31179.2°180.0°
N9C8C7C50.2°0.4°
C8N9C4N3179.8°179.8°
C8N9C4C50.5°0.3°
C8N9C1'H12149.4°142.4°
C7C8N9C40.2°0.4°
C8C7C31C5179.0°179.6°
C8C7C31C32109.3°23.8°
C8C7C5C40.4°0.2°
C8C7C5C6179.8°179.7°
N9C4C5C70.5°0.0°
N9C4N3C5179.6°180.0°
N9C4N3C2179.6°180.0°
N9C4C5C6179.6°180.0°
C4N9C1'H1232.3°37.2°
C4N9C8H16179.8°179.7°
C34C33C32C31119.1°146.1°
C34C33C32H17120.4°120.0°
C34C33C32H18120.3°120.0°
C34C33H17H18118.9°120.0°
C33C34H19H20118.6°120.0°
C33C34C35H2145.9°60.0°
C33C34C35H2273.1°60.0°
C31C7C5C4179.5°179.8°
C7C31C32C33117.2°177.7°
C31C7C5C60.7°0.1°
C31C7C8H160.8°0.1°
C5C7C31C3271.7°156.6°
C7C5C4N3179.7°180.0°
C7C5C4C6179.9°179.9°
C7C5C6N1179.7°180.0°
C7C5C6N60.3°0.1°
C5C7C8H16179.8°179.8°
C31C32C33H171.2°26.2°
C31C32C33H18120.5°93.8°
N3C4C5C60.1°0.0°
C4N3C2N10.0°0.0°
C4N3C2H13180.0°180.0°
C5C4N3C20.1°0.0°
C4C5C6N10.1°0.1°
C4C5C6N6179.9°180.0°
C32C33H17H18118.9°120.0°
C32C33C34H1979.3°60.0°
C32C33C34H20161.7°60.0°
N3C2N1H13180.0°179.9°
N3C2N1C60.0°0.1°
C5C6N1C20.1°0.1°
C5C6N1N6180.0°179.9°
C5C6N6H14179.9°179.9°
C5C6N6H1560.0°0.1°
C2N1C6N6180.0°180.0°
C6N1C2H13180.0°180.0°
N1C6N6H140.0°0.0°
N1C6N6H15120.0°180.0°
C6N6H14H15120.0°180.0°
H5C5'C4'H749.3°172.8°
H6C5'C4'H771.4°67.3°
H7C4'C3'H8154.2°146.3°
H8C3'O3'H957.6°57.4°
H8C3'C2'H1028.7°0.0°
H8C3'C2'H11150.4°122.7°
H10C2'C1'H12105.7°146.5°
H11C2'C1'H1216.1°23.9°
H17C33C34H1941.0°180.0°
H17C33C34H2078.0°60.0°
H18C33C34H19160.3°60.0°
H18C33C34H2041.3°180.0°
H19C34C35H21166.3°180.0°
H19C34C35H2247.4°60.0°
H20C34C35H2174.6°60.0°
H20C34C35H22166.4°NaN°
H21C35N36H23134.6°120.1°
H22C35N36H2315.6°120.0°
H24C39C40H26163.6°180.0°
H24C39C40H2743.9°60.0°
H25C39C40H2676.7°59.9°
H25C39C40H27163.6°180.0°
H26C40C41H28151.8°180.0°
H26C40C41H2932.3°60.0°
H27C40C41H2888.5°60.0°
H27C40C41H29152.0°180.0°
H28C41C42H3071.0°180.0°
H28C41C42H3148.3°60.0°
H29C41C42H30169.5°60.0°
H29C41C42H3171.2°180.0°
H30C42C43H32164.9°180.0°
H30C42C43H3375.5°59.9°
H31C42C43H3245.5°60.0°
H31C42C43H33165.2°180.0°
H32C43C44H34164.8°180.0°
H32C43C44H3575.7°60.0°
H33C43C44H3445.1°60.0°
H33C43C44H35164.7°180.0°
H34C44C45H3665.3°180.0°
H34C44C45H3754.4°60.0°
H35C44C45H36175.2°60.0°
H35C44C45H3765.1°180.0°
H36C45C46H38160.6°180.0°
H36C45C46H3980.0°60.0°
H37C45C46H3841.0°60.0°
H37C45C46H39160.3°180.0°
H38C46C47H40175.5°180.0°
H38C46C47H4164.5°60.0°
H39C46C47H4056.1°59.9°
H39C46C47H41176.1°180.0°
H40C47O48H4260.0°60.0°
H41C47O48H4260.0°60.0°

222624

PDB entries from 2024-07-17

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