0KL
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| O1G | PG | doub | 1.48Å | 1.51Å | |
| O3G | PG | sing | 1.61Å | 1.51Å | |
| PG | O2G | sing | 1.61Å | 1.51Å | |
| PG | O3B | sing | 1.61Å | 1.61Å | |
| O2B | PB | doub | 1.48Å | 1.51Å | |
| O1A | PA | doub | 1.48Å | 1.51Å | |
| O3B | PB | sing | 1.61Å | 1.61Å | |
| PB | O1B | sing | 1.61Å | 1.51Å | |
| PB | O3A | sing | 1.61Å | 1.61Å | |
| C5' | O5' | sing | 1.43Å | 1.43Å | |
| C5' | C4' | sing | 1.53Å | 1.52Å | |
| PA | O3A | sing | 1.61Å | 1.61Å | |
| PA | O5' | sing | 1.61Å | 1.61Å | |
| PA | O2A | sing | 1.61Å | 1.51Å | |
| O3' | C3' | sing | 1.43Å | 1.43Å | |
| C4' | C3' | sing | 1.54Å | 1.52Å | |
| C4' | O4' | sing | 1.44Å | 1.43Å | |
| C3' | C2' | sing | 1.55Å | 1.52Å | |
| O4' | C1' | sing | 1.44Å | 1.43Å | |
| C2' | C1' | sing | 1.54Å | 1.52Å | |
| C1' | N1 | sing | 1.47Å | 1.46Å | |
| C6 | N1 | sing | 1.36Å | 1.34Å | |
| C6 | C5 | doub | 1.37Å | 1.38Å | |
| N1 | C2 | sing | 1.34Å | 1.42Å | |
| C31 | C30 | sing | 1.47Å | 1.47Å | |
| C31 | C32 | sing | 1.53Å | 1.52Å | |
| C30 | C29 | trip | 1.17Å | 1.18Å | |
| C29 | C5 | sing | 1.43Å | 1.28Å | |
| C5 | C4 | sing | 1.47Å | 1.48Å | |
| C32 | C33 | sing | 1.53Å | 1.53Å | |
| C2 | O2 | doub | 1.22Å | 1.25Å | |
| C2 | N3 | sing | 1.34Å | 1.34Å | |
| C4 | N3 | sing | 1.35Å | 1.34Å | |
| C4 | O4 | doub | 1.22Å | 1.25Å | |
| C33 | N34 | sing | 1.47Å | 1.45Å | |
| O3G | H1 | sing | 0.97Å | 0.95Å | |
| O2G | H2 | sing | 0.97Å | 0.95Å | |
| O1B | H3 | sing | 0.97Å | 0.95Å | |
| O2A | H4 | sing | 0.97Å | 0.95Å | |
| C5' | H5 | sing | 1.09Å | 1.10Å | |
| C5' | H6 | sing | 1.09Å | 1.10Å | |
| C4' | H7 | sing | 1.09Å | 1.10Å | |
| C3' | H8 | sing | 1.09Å | 1.10Å | |
| O3' | H9 | sing | 0.97Å | 0.95Å | |
| C2' | H10 | sing | 1.09Å | 1.10Å | |
| C2' | H11 | sing | 1.09Å | 1.10Å | |
| C1' | H12 | sing | 1.09Å | 1.10Å | |
| N3 | H13 | sing | 0.97Å | 1.00Å | |
| C6 | H14 | sing | 1.08Å | 1.08Å | |
| C31 | H15 | sing | 1.09Å | 1.10Å | |
| C31 | H16 | sing | 1.09Å | 1.10Å | |
| C32 | H17 | sing | 1.09Å | 1.10Å | |
| C32 | H18 | sing | 1.09Å | 1.10Å | |
| C33 | H19 | sing | 1.09Å | 1.10Å | |
| C33 | H20 | sing | 1.09Å | 1.10Å | |
| N34 | H21 | sing | 1.01Å | 1.00Å | |
| N34 | H22 | sing | 1.01Å | 1.00Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| O1G | PG | O3G | 115.0° | 109.4° |
| O1G | PG | O2G | 114.1° | 109.4° |
| O1G | PG | O3B | 103.5° | 109.5° |
| O3G | PG | O2G | 113.6° | 109.5° |
| O3G | PG | O3B | 105.1° | 109.5° |
| PG | O3G | H1 | 109.5° | 114.1° |
| O2G | PG | O3B | 103.6° | 109.5° |
| PG | O2G | H2 | 109.5° | 114.0° |
| PG | O3B | PB | 123.2° | 134.0° |
| O2B | PB | O3B | 111.0° | 109.5° |
| O2B | PB | O1B | 119.8° | 109.5° |
| O2B | PB | O3A | 110.5° | 109.5° |
| O1A | PA | O3A | 110.1° | 109.5° |
| O1A | PA | O5' | 111.1° | 109.5° |
| O1A | PA | O2A | 119.9° | 109.5° |
| O3B | PB | O1B | 107.4° | 109.5° |
| O3B | PB | O3A | 100.5° | 109.5° |
| O1B | PB | O3A | 105.8° | 109.5° |
| PB | O1B | H3 | 109.5° | 114.0° |
| PB | O3A | PA | 123.5° | 134.0° |
| O5' | C5' | C4' | 108.4° | 109.5° |
| C5' | O5' | PA | 121.6° | 123.0° |
| O5' | C5' | H5 | 109.7° | 109.4° |
| O5' | C5' | H6 | 109.7° | 109.5° |
| C5' | C4' | C3' | 112.1° | 110.4° |
| C5' | C4' | O4' | 111.3° | 110.4° |
| C4' | C5' | H5 | 109.7° | 109.5° |
| C4' | C5' | H6 | 109.8° | 109.5° |
| C5' | C4' | H7 | 109.1° | 110.4° |
| O3A | PA | O5' | 98.7° | 109.5° |
| O3A | PA | O2A | 106.6° | 109.5° |
| O5' | PA | O2A | 108.3° | 109.5° |
| PA | O2A | H4 | 109.5° | 114.0° |
| O3' | C3' | C4' | 113.6° | 110.5° |
| O3' | C3' | C2' | 111.1° | 110.6° |
| O3' | C3' | H8 | 110.3° | 110.5° |
| C3' | O3' | H9 | 109.5° | 114.0° |
| C3' | C4' | O4' | 104.8° | 104.8° |
| C4' | C3' | C2' | 103.4° | 104.1° |
| C3' | C4' | H7 | 109.1° | 110.4° |
| C4' | C3' | H8 | 109.1° | 110.5° |
| C4' | O4' | C1' | 110.1° | 105.3° |
| O4' | C4' | H7 | 110.4° | 110.5° |
| C3' | C2' | C1' | 104.4° | 104.0° |
| C2' | C3' | H8 | 109.2° | 110.5° |
| C3' | C2' | H10 | 110.7° | 110.5° |
| C3' | C2' | H11 | 110.7° | 110.4° |
| O4' | C1' | C2' | 107.1° | 104.8° |
| O4' | C1' | N1 | 109.9° | 110.4° |
| O4' | C1' | H12 | 111.6° | 110.4° |
| C2' | C1' | N1 | 106.8° | 110.3° |
| C1' | C2' | H10 | 110.7° | 110.6° |
| C1' | C2' | H11 | 110.7° | 110.5° |
| C2' | C1' | H12 | 110.2° | 110.4° |
| C1' | N1 | C6 | 119.0° | 119.3° |
| C1' | N1 | C2 | 120.2° | 119.3° |
| N1 | C1' | H12 | 111.1° | 110.4° |
| N1 | C6 | C5 | 119.6° | 119.5° |
| C6 | N1 | C2 | 120.8° | 121.4° |
| N1 | C6 | H14 | 120.2° | 120.3° |
| C6 | C5 | C29 | 121.0° | 120.9° |
| C6 | C5 | C4 | 118.6° | 118.3° |
| C5 | C6 | H14 | 120.2° | 120.2° |
| N1 | C2 | O2 | 119.9° | 119.1° |
| N1 | C2 | N3 | 121.1° | 121.9° |
| C30 | C31 | C32 | 109.7° | 109.5° |
| C31 | C30 | C29 | 177.7° | 180.0° |
| C30 | C31 | H15 | 109.4° | 109.4° |
| C30 | C31 | H16 | 109.4° | 109.4° |
| C31 | C32 | C33 | 111.4° | 109.5° |
| C32 | C31 | H15 | 109.4° | 109.5° |
| C32 | C31 | H16 | 109.4° | 109.5° |
| C31 | C32 | H17 | 109.0° | 109.5° |
| C31 | C32 | H18 | 109.0° | 109.5° |
| C30 | C29 | C5 | 178.1° | 180.0° |
| C29 | C5 | C4 | 120.4° | 120.8° |
| C5 | C4 | N3 | 119.3° | 118.6° |
| C5 | C4 | O4 | 119.5° | 120.8° |
| C32 | C33 | N34 | 110.6° | 109.5° |
| C33 | C32 | H17 | 109.0° | 109.5° |
| C33 | C32 | H18 | 109.0° | 109.5° |
| C32 | C33 | H19 | 109.2° | 109.5° |
| C32 | C33 | H20 | 109.2° | 109.4° |
| O2 | C2 | N3 | 119.0° | 119.0° |
| C2 | N3 | C4 | 120.6° | 120.3° |
| C2 | N3 | H13 | 119.7° | 119.9° |
| N3 | C4 | O4 | 121.2° | 120.6° |
| C4 | N3 | H13 | 119.7° | 119.8° |
| N34 | C33 | H19 | 109.2° | 109.5° |
| N34 | C33 | H20 | 109.2° | 109.5° |
| C33 | N34 | H21 | 109.5° | 111.0° |
| C33 | N34 | H22 | 109.4° | 111.0° |
| H5 | C5' | H6 | 109.4° | 109.5° |
| H10 | C2' | H11 | 109.5° | 110.6° |
| H15 | C31 | H16 | 109.4° | 109.5° |
| H17 | C32 | H18 | 109.5° | 109.5° |
| H19 | C33 | H20 | 109.5° | 109.5° |
| H21 | N34 | H22 | 109.5° | 111.0° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| O1G | PG | O3G | O2G | 134.2° | 119.9° |
| O1G | PG | O3G | O3B | 113.2° | 120.0° |
| O1G | PG | O2G | O3B | 111.9° | 120.0° |
| O1G | PG | O3B | PB | 110.9° | 40.0° |
| O1G | PG | O3G | H1 | 92.4° | 60.0° |
| O1G | PG | O2G | H2 | 0.0° | 179.9° |
| O3G | PG | O2G | O3B | 113.5° | 120.1° |
| O3G | PG | O3B | PB | 10.1° | 160.0° |
| O3G | PG | O2G | H2 | 134.6° | 60.0° |
| O2G | PG | O3B | PB | 129.7° | 80.0° |
| O2G | PG | O3G | H1 | 133.4° | 59.9° |
| PG | O3B | PB | O2B | 16.8° | 45.0° |
| PG | O3B | PB | O1B | 149.5° | 75.0° |
| PG | O3B | PB | O3A | 100.2° | 165.0° |
| O3B | PG | O3G | H1 | 20.8° | 180.0° |
| O3B | PG | O2G | H2 | 111.9° | 60.0° |
| O2B | PB | O3B | O1B | 132.7° | 120.0° |
| O2B | PB | O3B | O3A | 117.0° | 120.0° |
| O2B | PB | O1B | O3A | 125.6° | 120.0° |
| O2B | PB | O3A | PA | 8.5° | 40.0° |
| O2B | PB | O1B | H3 | 0.0° | 179.9° |
| O1A | PA | O3A | PB | 13.3° | 40.0° |
| O1A | PA | O5' | C5' | 22.1° | 55.0° |
| O1A | PA | O3A | O5' | 116.3° | 120.0° |
| O1A | PA | O3A | O2A | 131.5° | 120.0° |
| O1A | PA | O5' | O2A | 133.6° | 120.0° |
| O1A | PA | O2A | H4 | 0.0° | 179.9° |
| O3B | PB | O1B | O3A | 106.7° | 120.0° |
| O3B | PB | O3A | PA | 108.9° | 160.0° |
| O3B | PB | O1B | H3 | 127.7° | 60.0° |
| O1B | PB | O3A | PA | 139.6° | 80.0° |
| PB | O3A | PA | O5' | 103.0° | 160.0° |
| PB | O3A | PA | O2A | 144.8° | 80.0° |
| O3A | PB | O1B | H3 | 125.6° | 60.0° |
| O5' | C5' | C4' | H5 | 119.9° | 119.9° |
| O5' | C5' | C4' | H6 | 119.8° | 120.0° |
| C5' | O5' | PA | O3A | 93.4° | 175.0° |
| C5' | O5' | PA | O2A | 155.8° | 65.0° |
| O5' | C5' | C4' | C3' | 56.9° | 175.0° |
| O5' | C5' | C4' | O4' | 60.1° | 69.6° |
| O5' | C5' | H5 | H6 | 120.5° | 120.0° |
| O5' | C5' | C4' | H7 | 177.9° | 52.7° |
| C4' | C5' | O5' | PA | 140.2° | 180.0° |
| C5' | C4' | C3' | O3' | 86.5° | 98.5° |
| C5' | C4' | C3' | O4' | 120.8° | 118.8° |
| C5' | C4' | C3' | H7 | 121.0° | 122.3° |
| C5' | C4' | O4' | H7 | 121.3° | 122.3° |
| C5' | C4' | C3' | C2' | 153.0° | 142.8° |
| C5' | C4' | O4' | C1' | 146.7° | 159.4° |
| C4' | C5' | H5 | H6 | 120.5° | 120.0° |
| C5' | C4' | C3' | H8 | 37.0° | 24.2° |
| O3A | PA | O5' | O2A | 110.8° | 120.0° |
| O3A | PA | O2A | H4 | 125.7° | 60.0° |
| O5' | PA | O2A | H4 | 128.9° | 60.0° |
| PA | O5' | C5' | H5 | 20.4° | 60.0° |
| PA | O5' | C5' | H6 | 99.9° | 60.0° |
| O3' | C3' | C4' | C2' | 120.5° | 118.7° |
| O3' | C3' | C4' | H8 | 123.5° | 122.7° |
| O3' | C3' | C4' | O4' | 152.7° | 142.7° |
| O3' | C3' | C2' | H8 | 121.9° | 122.7° |
| O3' | C3' | C2' | C1' | 149.3° | 118.7° |
| O3' | C3' | C4' | H7 | 34.5° | 23.8° |
| O3' | C3' | C2' | H10 | 91.5° | 122.6° |
| O3' | C3' | C2' | H11 | 30.1° | 0.1° |
| C3' | C4' | O4' | H7 | 117.4° | 118.9° |
| C4' | C3' | C2' | H8 | 116.0° | 118.6° |
| C3' | C4' | O4' | C1' | 25.4° | 40.5° |
| C4' | C3' | C2' | C1' | 27.1° | 0.0° |
| C3' | C4' | C5' | H5 | 63.0° | 65.1° |
| C3' | C4' | C5' | H6 | 176.7° | 55.0° |
| C4' | C3' | O3' | H9 | 180.0° | 180.0° |
| C4' | C3' | C2' | H10 | 146.3° | 118.7° |
| C4' | C3' | C2' | H11 | 92.1° | 118.6° |
| O4' | C4' | C3' | C2' | 32.3° | 24.0° |
| C4' | O4' | C1' | C2' | 8.0° | 40.5° |
| C4' | O4' | C1' | N1 | 123.6° | 159.4° |
| O4' | C4' | C5' | H5 | 180.0° | 50.3° |
| O4' | C4' | C5' | H6 | 59.7° | 170.4° |
| O4' | C4' | C3' | H8 | 83.8° | 94.6° |
| C4' | O4' | C1' | H12 | 112.7° | 78.3° |
| C3' | C2' | C1' | O4' | 12.8° | 24.0° |
| C3' | C2' | C1' | H10 | 119.2° | 118.7° |
| C3' | C2' | C1' | H11 | 119.2° | 118.6° |
| C3' | C2' | C1' | N1 | 104.9° | 142.9° |
| C2' | C3' | C4' | H7 | 86.0° | 95.0° |
| C2' | C3' | O3' | H9 | 64.0° | 65.3° |
| C3' | C2' | H10 | H11 | 122.3° | 122.6° |
| C3' | C2' | C1' | H12 | 134.3° | 94.9° |
| O4' | C1' | C2' | N1 | 117.7° | 118.8° |
| O4' | C1' | C2' | H12 | 121.5° | 118.9° |
| O4' | C1' | N1 | H12 | 123.9° | 122.3° |
| O4' | C1' | N1 | C6 | 29.1° | 129.9° |
| O4' | C1' | N1 | C2 | 152.9° | 50.4° |
| C1' | O4' | C4' | H7 | 92.0° | 78.3° |
| O4' | C1' | C2' | H10 | 132.0° | 94.6° |
| O4' | C1' | C2' | H11 | 106.4° | 142.6° |
| C2' | C1' | N1 | H12 | 120.3° | 122.3° |
| C2' | C1' | N1 | C6 | 86.7° | 114.7° |
| C2' | C1' | N1 | C2 | 91.3° | 65.0° |
| C1' | C2' | C3' | H8 | 88.8° | 118.7° |
| C1' | C2' | H10 | H11 | 122.4° | 122.7° |
| C1' | N1 | C6 | C2 | 178.0° | 179.7° |
| C1' | N1 | C6 | C5 | 179.1° | 180.0° |
| C1' | N1 | C2 | O2 | 1.3° | 0.1° |
| C1' | N1 | C2 | N3 | 179.1° | 180.0° |
| N1 | C1' | C2' | H10 | 14.3° | 24.2° |
| N1 | C1' | C2' | H11 | 135.9° | 98.6° |
| C1' | N1 | C6 | H14 | 0.8° | 0.0° |
| N1 | C6 | C5 | H14 | 180.0° | 180.0° |
| N1 | C6 | C5 | C29 | 179.1° | 180.0° |
| N1 | C6 | C5 | C4 | 0.5° | 0.1° |
| C6 | N1 | C2 | O2 | 179.3° | 179.7° |
| C6 | N1 | C2 | N3 | 1.1° | 0.3° |
| C6 | N1 | C1' | H12 | 153.0° | 7.6° |
| C5 | C6 | N1 | C2 | 1.2° | 0.3° |
| C6 | C5 | C29 | C30 | 161.5° | 169.3° |
| C6 | C5 | C29 | C4 | 179.6° | 179.9° |
| C6 | C5 | C4 | N3 | 0.2° | 0.2° |
| C6 | C5 | C4 | O4 | 180.0° | 180.0° |
| N1 | C2 | O2 | N3 | 179.6° | 179.9° |
| N1 | C2 | N3 | C4 | 0.4° | 0.0° |
| C2 | N1 | C1' | H12 | 29.0° | 172.7° |
| N1 | C2 | N3 | H13 | 179.6° | 180.0° |
| C2 | N1 | C6 | H14 | 178.8° | 179.7° |
| C30 | C31 | C32 | H15 | 120.1° | 120.0° |
| C30 | C31 | C32 | H16 | 120.0° | 120.0° |
| C31 | C30 | C29 | C5 | 174.9° | 99.7° |
| C30 | C31 | C32 | C33 | 60.1° | 180.0° |
| C30 | C31 | H15 | H16 | 119.9° | 119.9° |
| C30 | C31 | C32 | H17 | 179.7° | 60.0° |
| C30 | C31 | C32 | H18 | 60.2° | 60.0° |
| C32 | C31 | C30 | C29 | 175.7° | 89.0° |
| C31 | C32 | C33 | H17 | 120.3° | 120.0° |
| C31 | C32 | C33 | H18 | 120.3° | 120.0° |
| C31 | C32 | C33 | N34 | 91.2° | 180.0° |
| C32 | C31 | H15 | H16 | 119.9° | 120.1° |
| C31 | C32 | H17 | H18 | 119.1° | 120.0° |
| C31 | C32 | C33 | H19 | 29.0° | 60.0° |
| C31 | C32 | C33 | H20 | 148.7° | 60.0° |
| C30 | C29 | C5 | C4 | 18.9° | 10.7° |
| C29 | C30 | C31 | H15 | 64.2° | 151.0° |
| C29 | C30 | C31 | H16 | 55.7° | 31.1° |
| C29 | C5 | C4 | N3 | 179.8° | 179.7° |
| C29 | C5 | C4 | O4 | 0.4° | 0.1° |
| C29 | C5 | C6 | H14 | 1.0° | 0.0° |
| C5 | C4 | N3 | C2 | 0.2° | 0.2° |
| C5 | C4 | N3 | O4 | 179.8° | 179.8° |
| C5 | C4 | N3 | H13 | 179.8° | 179.8° |
| C4 | C5 | C6 | H14 | 179.5° | 179.9° |
| C32 | C33 | N34 | H19 | 120.2° | 120.0° |
| C32 | C33 | N34 | H20 | 120.2° | 119.9° |
| C33 | C32 | C31 | H15 | 60.0° | 60.0° |
| C33 | C32 | C31 | H16 | 179.9° | 60.0° |
| C33 | C32 | H17 | H18 | 119.1° | 120.0° |
| C32 | C33 | H19 | H20 | 119.5° | 120.0° |
| C32 | C33 | N34 | H21 | 180.0° | 180.0° |
| C32 | C33 | N34 | H22 | 60.0° | 56.0° |
| O2 | C2 | N3 | C4 | 180.0° | 179.9° |
| O2 | C2 | N3 | H13 | 0.0° | 0.1° |
| C2 | N3 | C4 | H13 | 180.0° | 180.0° |
| C2 | N3 | C4 | O4 | 179.9° | 179.9° |
| O4 | C4 | N3 | H13 | 0.1° | 0.0° |
| N34 | C33 | C32 | H17 | 148.6° | 60.0° |
| N34 | C33 | C32 | H18 | 29.1° | 60.0° |
| N34 | C33 | H19 | H20 | 119.5° | 120.0° |
| C33 | N34 | H21 | H22 | 120.0° | 124.0° |
| H5 | C5' | C4' | H7 | 58.0° | 172.7° |
| H6 | C5' | C4' | H7 | 62.3° | 67.2° |
| H7 | C4' | C3' | H8 | 158.0° | 146.4° |
| H8 | C3' | O3' | H9 | 57.2° | 57.3° |
| H8 | C3' | C2' | H10 | 30.3° | 0.0° |
| H8 | C3' | C2' | H11 | 152.0° | 122.7° |
| H10 | C2' | C1' | H12 | 106.5° | 146.5° |
| H11 | C2' | C1' | H12 | 15.1° | 23.7° |
| H15 | C31 | C32 | H17 | 60.3° | 180.0° |
| H15 | C31 | C32 | H18 | 179.7° | 60.0° |
| H16 | C31 | C32 | H17 | 59.6° | 60.0° |
| H16 | C31 | C32 | H18 | 59.8° | 180.0° |
| H17 | C32 | C33 | H19 | 91.3° | 180.0° |
| H17 | C32 | C33 | H20 | 28.4° | 60.0° |
| H18 | C32 | C33 | H19 | 149.3° | 60.0° |
| H18 | C32 | C33 | H20 | 91.0° | 180.0° |
| H19 | C33 | N34 | H21 | 59.8° | 60.0° |
| H19 | C33 | N34 | H22 | 179.9° | 176.0° |
| H20 | C33 | N34 | H21 | 59.8° | 60.1° |
| H20 | C33 | N34 | H22 | 60.2° | 63.9° |
