0G4
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| O1B | PB | doub | 1.48Å | 1.57Å | |
| O1G | PG | doub | 1.48Å | 1.53Å | |
| N3B | PB | sing | 1.68Å | 1.54Å | |
| N3B | PG | sing | 1.68Å | 1.84Å | |
| PB | O2B | sing | 1.61Å | 1.62Å | |
| PB | O3A | sing | 1.61Å | 1.63Å | |
| O3G | PG | sing | 1.61Å | 1.58Å | |
| PG | O2C | sing | 1.61Å | 1.62Å | |
| O3A | PA | sing | 1.61Å | 1.62Å | |
| PA | O1A | doub | 1.48Å | 1.52Å | |
| PA | O2A | sing | 1.61Å | 1.51Å | |
| PA | O5' | sing | 1.61Å | 1.61Å | |
| F5 | C5 | sing | 1.35Å | 1.33Å | |
| N4 | C4 | sing | 1.38Å | 1.36Å | |
| O5' | C5' | sing | 1.43Å | 1.43Å | |
| C5 | C4 | sing | 1.41Å | 1.47Å | |
| C5 | C6 | doub | 1.36Å | 1.39Å | |
| C5' | C4' | sing | 1.53Å | 1.52Å | |
| C4 | N3 | doub | 1.33Å | 1.33Å | |
| C6 | N1 | sing | 1.36Å | 1.32Å | |
| O4' | C4' | sing | 1.45Å | 1.42Å | |
| O4' | C1' | sing | 1.43Å | 1.42Å | |
| N3 | C2 | sing | 1.33Å | 1.33Å | |
| N1 | C2 | sing | 1.35Å | 1.32Å | |
| N1 | C1' | sing | 1.46Å | 1.45Å | |
| C4' | S3' | sing | 1.84Å | 1.73Å | |
| C2 | O2 | doub | 1.22Å | 1.24Å | |
| C1' | C2' | sing | 1.55Å | 1.53Å | |
| S3' | C2' | sing | 1.84Å | 1.75Å | |
| N4 | H1 | sing | 0.97Å | 1.00Å | |
| N4 | H2 | sing | 0.97Å | 1.00Å | |
| C6 | H3 | sing | 1.08Å | 1.08Å | |
| C1' | H4 | sing | 1.09Å | 1.10Å | |
| C2' | H5 | sing | 1.09Å | 1.10Å | |
| C2' | H6 | sing | 1.09Å | 1.10Å | |
| C4' | H7 | sing | 1.09Å | 1.10Å | |
| C5' | H8 | sing | 1.09Å | 1.10Å | |
| C5' | H9 | sing | 1.09Å | 1.10Å | |
| O2A | H10 | sing | 0.97Å | 0.95Å | |
| O2B | H11 | sing | 0.97Å | 0.95Å | |
| N3B | H12 | sing | 1.01Å | 1.00Å | |
| O3G | H13 | sing | 0.97Å | 0.95Å | |
| O2C | H14 | sing | 0.97Å | 0.95Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| O1B | PB | N3B | 101.9° | 109.5° |
| O1B | PB | O2B | 119.8° | 109.5° |
| O1B | PB | O3A | 106.4° | 109.4° |
| O1G | PG | N3B | 103.1° | 109.4° |
| O1G | PG | O3G | 110.6° | 109.5° |
| O1G | PG | O2C | 114.2° | 109.4° |
| PB | N3B | PG | 112.1° | 111.0° |
| N3B | PB | O2B | 113.5° | 109.5° |
| N3B | PB | O3A | 107.1° | 109.5° |
| PB | N3B | H12 | 108.8° | 111.0° |
| N3B | PG | O3G | 99.7° | 109.4° |
| N3B | PG | O2C | 100.9° | 109.5° |
| PG | N3B | H12 | 108.8° | 111.0° |
| O2B | PB | O3A | 107.3° | 109.4° |
| PB | O2B | H11 | 109.5° | 114.0° |
| PB | O3A | PA | 123.2° | 134.0° |
| O3G | PG | O2C | 124.1° | 109.5° |
| PG | O3G | H13 | 109.5° | 114.0° |
| PG | O2C | H14 | 109.5° | 114.0° |
| O3A | PA | O1A | 105.8° | 109.5° |
| O3A | PA | O2A | 108.2° | 109.5° |
| O3A | PA | O5' | 106.4° | 109.5° |
| O1A | PA | O2A | 121.0° | 109.5° |
| O1A | PA | O5' | 106.0° | 109.5° |
| O2A | PA | O5' | 108.6° | 109.4° |
| PA | O2A | H10 | 109.5° | 114.0° |
| PA | O5' | C5' | 120.5° | 123.0° |
| F5 | C5 | C4 | 119.6° | 120.5° |
| F5 | C5 | C6 | 121.2° | 120.5° |
| N4 | C4 | C5 | 121.1° | 120.2° |
| N4 | C4 | N3 | 122.3° | 120.2° |
| C4 | N4 | H1 | 120.0° | 120.0° |
| C4 | N4 | H2 | 120.0° | 120.0° |
| O5' | C5' | C4' | 107.7° | 109.5° |
| O5' | C5' | H8 | 109.9° | 109.5° |
| O5' | C5' | H9 | 109.9° | 109.5° |
| C4 | C5 | C6 | 119.2° | 118.9° |
| C5 | C4 | N3 | 116.6° | 119.6° |
| C5 | C6 | N1 | 118.2° | 119.2° |
| C5 | C6 | H3 | 120.9° | 120.4° |
| C5' | C4' | O4' | 102.3° | 110.9° |
| C5' | C4' | S3' | 108.6° | 110.9° |
| C5' | C4' | H7 | 114.2° | 110.9° |
| C4' | C5' | H8 | 109.9° | 109.5° |
| C4' | C5' | H9 | 109.9° | 109.5° |
| C4 | N3 | C2 | 121.4° | 120.7° |
| C6 | N1 | C2 | 122.1° | 120.3° |
| C6 | N1 | C1' | 119.0° | 119.8° |
| N1 | C6 | H3 | 120.9° | 120.4° |
| C4' | O4' | C1' | 115.0° | 110.0° |
| O4' | C4' | S3' | 103.6° | 102.0° |
| O4' | C4' | H7 | 116.1° | 110.9° |
| O4' | C1' | N1 | 107.4° | 109.5° |
| O4' | C1' | C2' | 112.0° | 109.4° |
| O4' | C1' | H4 | 110.4° | 109.4° |
| N3 | C2 | N1 | 122.6° | 121.1° |
| N3 | C2 | O2 | 119.2° | 119.4° |
| C2 | N1 | C1' | 118.9° | 119.8° |
| N1 | C2 | O2 | 118.2° | 119.4° |
| N1 | C1' | C2' | 108.1° | 109.5° |
| N1 | C1' | H4 | 110.0° | 109.5° |
| C4' | S3' | C2' | 100.4° | 95.5° |
| S3' | C4' | H7 | 111.1° | 110.9° |
| C1' | C2' | S3' | 102.1° | 102.2° |
| C2' | C1' | H4 | 108.9° | 109.5° |
| C1' | C2' | H5 | 111.3° | 110.9° |
| C1' | C2' | H6 | 111.2° | 110.8° |
| S3' | C2' | H5 | 111.3° | 110.9° |
| S3' | C2' | H6 | 111.3° | 111.1° |
| H1 | N4 | H2 | 120.0° | 120.0° |
| H5 | C2' | H6 | 109.5° | 110.7° |
| H8 | C5' | H9 | 109.5° | 109.4° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| O1B | PB | N3B | O2B | 130.3° | 120.0° |
| O1B | PB | N3B | O3A | 111.5° | 120.0° |
| O1B | PB | N3B | PG | 103.0° | 60.0° |
| O1B | PB | O2B | O3A | 121.3° | 120.0° |
| O1B | PB | O3A | PA | 139.8° | 60.0° |
| O1B | PB | O2B | H11 | 0.0° | 180.0° |
| O1B | PB | N3B | H12 | 17.3° | 176.1° |
| O1G | PG | N3B | PB | 143.8° | 60.0° |
| O1G | PG | N3B | O3G | 114.0° | 120.0° |
| O1G | PG | N3B | O2C | 118.3° | 119.9° |
| O1G | PG | O3G | O2C | 141.5° | 120.0° |
| O1G | PG | N3B | H12 | 23.4° | 176.1° |
| O1G | PG | O3G | H13 | 0.0° | 60.0° |
| O1G | PG | O2C | H14 | 0.0° | 180.0° |
| PB | N3B | PG | H12 | 120.4° | 124.0° |
| N3B | PB | O2B | O3A | 118.1° | 120.0° |
| PB | N3B | PG | O3G | 29.9° | 180.0° |
| PB | N3B | PG | O2C | 97.8° | 60.0° |
| N3B | PB | O3A | PA | 111.7° | 180.0° |
| N3B | PB | O2B | H11 | 120.6° | 60.0° |
| PG | N3B | PB | O2B | 126.7° | 60.0° |
| PG | N3B | PB | O3A | 8.5° | 180.0° |
| N3B | PG | O3G | O2C | 110.4° | 120.0° |
| N3B | PG | O3G | H13 | 108.1° | 180.0° |
| N3B | PG | O2C | H14 | 109.9° | 60.0° |
| O2B | PB | O3A | PA | 10.5° | 60.0° |
| O2B | PB | N3B | H12 | 112.9° | 63.9° |
| PB | O3A | PA | O1A | 127.6° | 45.0° |
| PB | O3A | PA | O2A | 3.4° | 75.0° |
| PB | O3A | PA | O5' | 120.0° | 165.0° |
| O3A | PB | O2B | H11 | 121.3° | 60.0° |
| O3A | PB | N3B | H12 | 128.9° | 56.1° |
| O3G | PG | N3B | H12 | 90.5° | 56.1° |
| O3G | PG | O2C | H14 | 140.3° | 60.0° |
| O2C | PG | N3B | H12 | 141.8° | 64.0° |
| O2C | PG | O3G | H13 | 141.5° | 60.0° |
| O3A | PA | O1A | O2A | 123.3° | 120.0° |
| O3A | PA | O1A | O5' | 112.7° | 120.0° |
| O3A | PA | O2A | O5' | 115.1° | 120.0° |
| O3A | PA | O5' | C5' | 65.0° | 175.0° |
| O3A | PA | O2A | H10 | 122.1° | 59.9° |
| O1A | PA | O2A | O5' | 122.8° | 120.0° |
| O1A | PA | O5' | C5' | 177.3° | 55.0° |
| O1A | PA | O2A | H10 | 0.0° | 180.0° |
| O2A | PA | O5' | C5' | 51.3° | 65.0° |
| PA | O5' | C5' | C4' | 179.3° | 180.0° |
| PA | O5' | C5' | H8 | 59.5° | 59.9° |
| PA | O5' | C5' | H9 | 61.0° | 60.0° |
| O5' | PA | O2A | H10 | 122.8° | 60.0° |
| F5 | C5 | C4 | N4 | 0.4° | 0.0° |
| F5 | C5 | C4 | C6 | 179.4° | 179.8° |
| F5 | C5 | C4 | N3 | 179.3° | 180.0° |
| F5 | C5 | C6 | N1 | 179.6° | 179.8° |
| F5 | C5 | C6 | H3 | 0.4° | 0.0° |
| N4 | C4 | C5 | N3 | 178.9° | 180.0° |
| N4 | C4 | C5 | C6 | 179.0° | 179.8° |
| N4 | C4 | N3 | C2 | 179.5° | 179.9° |
| C4 | N4 | H1 | H2 | 180.0° | 180.0° |
| O5' | C5' | C4' | H8 | 119.7° | 120.0° |
| O5' | C5' | C4' | H9 | 119.7° | 120.0° |
| O5' | C5' | C4' | O4' | 42.2° | 60.0° |
| O5' | C5' | C4' | S3' | 66.9° | 52.7° |
| O5' | C5' | C4' | H7 | 168.5° | 176.3° |
| O5' | C5' | H8 | H9 | 120.8° | 120.0° |
| C4 | C5 | C6 | N1 | 0.2° | 0.4° |
| C5 | C4 | N3 | C2 | 0.6° | 0.1° |
| C5 | C4 | N4 | H1 | 178.9° | 0.0° |
| C5 | C4 | N4 | H2 | 1.2° | 180.0° |
| C4 | C5 | C6 | H3 | 179.8° | 179.8° |
| C6 | C5 | C4 | N3 | 0.1° | 0.3° |
| C5 | C6 | N1 | H3 | 180.0° | 179.8° |
| C5 | C6 | N1 | C2 | 0.1° | 0.4° |
| C5 | C6 | N1 | C1' | 178.6° | 180.0° |
| C5' | C4' | O4' | S3' | 112.9° | 118.2° |
| C5' | C4' | O4' | H7 | 125.1° | 123.7° |
| C5' | C4' | O4' | C1' | 140.1° | 162.4° |
| C5' | C4' | S3' | H7 | 126.4° | 123.7° |
| C5' | C4' | S3' | C2' | 124.5° | 140.9° |
| C4' | C5' | H8 | H9 | 120.8° | 120.0° |
| C4 | N3 | C2 | N1 | 0.8° | 0.0° |
| C4 | N3 | C2 | O2 | 179.7° | 180.0° |
| N3 | C4 | N4 | H1 | 0.0° | 180.0° |
| N3 | C4 | N4 | H2 | 180.0° | 0.0° |
| C6 | N1 | C1' | O4' | 40.4° | 0.0° |
| C6 | N1 | C2 | N3 | 0.5° | 0.2° |
| C6 | N1 | C2 | C1' | 178.7° | 179.6° |
| C6 | N1 | C2 | O2 | 179.9° | 179.8° |
| C6 | N1 | C1' | C2' | 80.5° | 119.9° |
| C6 | N1 | C1' | H4 | 160.7° | 120.0° |
| C4' | O4' | C1' | N1 | 146.3° | 169.7° |
| O4' | C4' | S3' | H7 | 125.3° | 118.1° |
| C4' | O4' | C1' | C2' | 27.8° | 49.7° |
| O4' | C4' | S3' | C2' | 16.2° | 22.7° |
| C4' | O4' | C1' | H4 | 93.8° | 70.2° |
| O4' | C4' | C5' | H8 | 77.5° | 180.0° |
| O4' | C4' | C5' | H9 | 161.9° | 60.0° |
| O4' | C1' | N1 | C2 | 140.8° | 179.6° |
| O4' | C1' | N1 | C2' | 121.0° | 120.0° |
| O4' | C1' | N1 | H4 | 120.2° | 120.0° |
| C1' | O4' | C4' | S3' | 27.2° | 44.2° |
| O4' | C1' | C2' | H4 | 122.4° | 120.0° |
| O4' | C1' | C2' | S3' | 13.0° | 27.9° |
| O4' | C1' | C2' | H5 | 105.8° | 90.3° |
| O4' | C1' | C2' | H6 | 131.8° | 146.3° |
| C1' | O4' | C4' | H7 | 94.9° | 73.9° |
| N3 | C2 | N1 | O2 | 179.5° | 180.0° |
| N3 | C2 | N1 | C1' | 179.1° | 179.8° |
| C2 | N1 | C1' | C2' | 98.2° | 60.4° |
| C2 | N1 | C6 | H3 | 180.0° | 179.8° |
| C2 | N1 | C1' | H4 | 20.6° | 59.6° |
| C1' | N1 | C2 | O2 | 1.4° | 0.2° |
| N1 | C1' | C2' | H4 | 119.5° | 120.0° |
| N1 | C1' | C2' | S3' | 131.2° | 147.9° |
| C1' | N1 | C6 | H3 | 1.4° | 0.2° |
| N1 | C1' | C2' | H5 | 12.3° | 29.7° |
| N1 | C1' | C2' | H6 | 110.0° | 93.7° |
| C4' | S3' | C2' | C1' | 2.2° | 2.2° |
| C4' | S3' | C2' | H5 | 121.0° | 116.0° |
| C4' | S3' | C2' | H6 | 116.6° | 120.4° |
| S3' | C4' | C5' | H8 | 173.3° | 67.4° |
| S3' | C4' | C5' | H9 | 52.8° | 172.6° |
| C1' | C2' | S3' | H5 | 118.8° | 118.2° |
| C1' | C2' | S3' | H6 | 118.8° | 118.2° |
| C1' | C2' | H5 | H6 | 123.4° | 123.5° |
| S3' | C2' | C1' | H4 | 109.4° | 92.1° |
| S3' | C2' | H5 | H6 | 123.4° | 123.8° |
| C2' | S3' | C4' | H7 | 109.1° | 95.4° |
| H4 | C1' | C2' | H5 | 131.8° | 149.7° |
| H4 | C1' | C2' | H6 | 9.4° | 26.3° |
| H7 | C4' | C5' | H8 | 48.8° | 56.3° |
| H7 | C4' | C5' | H9 | 71.8° | 63.7° |
