0E5
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
C1 | C2 | sing | 1.53Å | 1.53Å | |
C2 | C3 | sing | 1.53Å | 1.55Å | |
C | O | doub | 1.21Å | 1.25Å | |
C | CA | sing | 1.51Å | 1.57Å | |
C4 | C3 | sing | 1.53Å | 1.56Å | |
C3 | CA | sing | 1.53Å | 1.56Å | |
CA | N | sing | 1.47Å | 1.47Å | |
C1 | H11 | sing | 1.09Å | 1.10Å | |
C1 | H12 | sing | 1.09Å | 1.10Å | |
C1 | H13 | sing | 1.09Å | 1.10Å | |
C2 | H4 | sing | 1.09Å | 1.10Å | |
C2 | H5 | sing | 1.09Å | 1.10Å | |
C4 | H6 | sing | 1.09Å | 1.10Å | |
C4 | H7 | sing | 1.09Å | 1.10Å | |
C4 | H8 | sing | 1.09Å | 1.10Å | |
N | H | sing | 1.01Å | 1.00Å | |
CA | HA | sing | 1.09Å | 1.10Å | |
C | OXT | sing | 1.34Å | 136.25Å | |
OXT | HXT | sing | 0.97Å | 0.00Å | |
N | H2 | sing | 1.01Å | 1.00Å | |
C3 | O3 | sing | 1.43Å | 135.41Å | |
O3 | H9 | sing | 0.97Å | 0.00Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
C1 | C2 | C3 | 114.5° | 109.4° |
C2 | C1 | H11 | 109.5° | 109.5° |
C2 | C1 | H12 | 109.5° | 109.5° |
C2 | C1 | H13 | 109.5° | 109.5° |
C1 | C2 | H4 | 108.2° | 109.4° |
C1 | C2 | H5 | 108.2° | 109.5° |
C2 | C3 | C4 | 107.6° | 109.5° |
C2 | C3 | CA | 105.6° | 109.4° |
C3 | C2 | H4 | 108.2° | 109.5° |
C3 | C2 | H5 | 108.2° | 109.5° |
C2 | C3 | O3 | 31.8° | 109.5° |
O | C | CA | 118.1° | 120.0° |
O | C | OXT | 96.2° | 120.0° |
C | CA | C3 | 121.9° | 109.5° |
C | CA | N | 114.8° | 109.5° |
C | CA | HA | 101.6° | 109.5° |
CA | C | OXT | 100.4° | 120.0° |
C4 | C3 | CA | 113.8° | 109.5° |
C3 | C4 | H6 | 109.5° | 109.5° |
C3 | C4 | H7 | 109.5° | 109.5° |
C3 | C4 | H8 | 109.5° | 109.5° |
C4 | C3 | O3 | 85.0° | 109.5° |
C3 | CA | N | 110.8° | 109.5° |
C3 | CA | HA | 101.7° | 109.5° |
CA | C3 | O3 | 136.6° | 109.5° |
CA | N | H | 109.5° | 110.9° |
N | CA | HA | 102.4° | 109.5° |
CA | N | H2 | 109.5° | 111.0° |
H11 | C1 | H12 | 109.5° | 109.5° |
H11 | C1 | H13 | 109.4° | 109.5° |
H12 | C1 | H13 | 109.5° | 109.4° |
H4 | C2 | H5 | 109.4° | 109.5° |
H6 | C4 | H7 | 109.5° | 109.5° |
H6 | C4 | H8 | 109.5° | 109.5° |
H7 | C4 | H8 | 109.5° | 109.4° |
H | N | H2 | 109.4° | 111.0° |
C | OXT | HXT | 90.0° | 117.0° |
C3 | O3 | H9 | 90.0° | 114.0° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
C1 | C2 | C3 | H4 | 120.7° | 119.9° |
C1 | C2 | C3 | H5 | 120.8° | 120.0° |
C1 | C2 | C3 | C4 | 85.5° | 60.0° |
C1 | C2 | C3 | CA | 152.6° | 180.0° |
C2 | C1 | H11 | H12 | 120.0° | 120.0° |
C2 | C1 | H11 | H13 | 120.0° | 120.0° |
C2 | C1 | H12 | H13 | 120.0° | 119.9° |
C1 | C2 | H4 | H5 | 117.7° | 120.0° |
C1 | C2 | C3 | O3 | 38.8° | 60.1° |
C2 | C3 | CA | C | 11.7° | 65.0° |
C2 | C3 | C4 | CA | 116.7° | 120.0° |
C2 | C3 | C4 | O3 | 22.6° | 120.0° |
C2 | C3 | CA | O3 | 8.7° | 120.0° |
C2 | C3 | CA | N | 151.7° | 175.0° |
C3 | C2 | C1 | H11 | 180.0° | 60.0° |
C3 | C2 | C1 | H12 | 60.0° | 60.1° |
C3 | C2 | C1 | H13 | 60.0° | 180.0° |
C3 | C2 | H4 | H5 | 117.7° | 120.1° |
C2 | C3 | C4 | H6 | 180.0° | 60.0° |
C2 | C3 | C4 | H7 | 60.0° | 180.0° |
C2 | C3 | C4 | H8 | 60.0° | 60.0° |
C2 | C3 | CA | HA | 100.0° | 55.0° |
C2 | C3 | O3 | H9 | 90.0° | 60.0° |
O | C | CA | OXT | 102.8° | 180.0° |
O | C | CA | C3 | 104.9° | 100.0° |
O | C | CA | N | 116.6° | 20.0° |
O | C | CA | HA | 6.9° | 140.1° |
O | C | OXT | HXT | 90.0° | 0.0° |
C | CA | C3 | C4 | 106.2° | 175.0° |
C | CA | C3 | N | 140.0° | 120.0° |
C | CA | C3 | HA | 111.7° | 120.0° |
C | CA | N | HA | 109.2° | 120.0° |
C | CA | N | H | 180.0° | 60.0° |
CA | C | OXT | HXT | 90.0° | 180.0° |
C | CA | N | H2 | 60.0° | 176.1° |
C | CA | C3 | O3 | 3.0° | 55.0° |
C4 | C3 | CA | O3 | 109.1° | 120.0° |
C4 | C3 | CA | N | 33.8° | 55.0° |
C4 | C3 | C2 | H4 | 153.8° | 60.0° |
C4 | C3 | C2 | H5 | 35.3° | 180.0° |
C3 | C4 | H6 | H7 | 120.0° | 120.0° |
C3 | C4 | H6 | H8 | 120.0° | 120.0° |
C3 | C4 | H7 | H8 | 120.0° | 120.0° |
C4 | C3 | CA | HA | 142.1° | 65.0° |
C4 | C3 | O3 | H9 | 90.0° | 180.0° |
C3 | CA | N | HA | 107.8° | 120.0° |
CA | C3 | C2 | H4 | 31.9° | 60.1° |
CA | C3 | C2 | H5 | 86.6° | 60.0° |
CA | C3 | C4 | H6 | 63.3° | 60.0° |
CA | C3 | C4 | H7 | 56.7° | 60.0° |
CA | C3 | C4 | H8 | 176.7° | 180.0° |
C3 | CA | N | H | 37.0° | 60.0° |
C3 | CA | C | OXT | 2.1° | 80.0° |
C3 | CA | N | H2 | 157.0° | 63.9° |
CA | C3 | O3 | H9 | 90.0° | 60.0° |
CA | N | H | H2 | 120.0° | 123.9° |
N | CA | C | OXT | 140.6° | 160.0° |
N | CA | C3 | O3 | 142.9° | 65.0° |
H11 | C1 | H12 | H13 | 120.0° | 120.0° |
H11 | C1 | C2 | H4 | 59.2° | 60.0° |
H11 | C1 | C2 | H5 | 59.2° | 180.0° |
H12 | C1 | C2 | H4 | 60.8° | 179.9° |
H12 | C1 | C2 | H5 | 179.3° | 60.0° |
H13 | C1 | C2 | H4 | 179.2° | 60.0° |
H13 | C1 | C2 | H5 | 60.7° | 60.0° |
H4 | C2 | C3 | O3 | 159.6° | 180.0° |
H5 | C2 | C3 | O3 | 81.9° | 60.0° |
H6 | C4 | H7 | H8 | 120.0° | 120.0° |
H6 | C4 | C3 | O3 | 157.4° | 180.0° |
H7 | C4 | C3 | O3 | 82.6° | 60.0° |
H8 | C4 | C3 | O3 | 37.4° | 60.0° |
H | N | CA | HA | 70.8° | 180.0° |
HA | CA | C | OXT | 109.7° | 40.0° |
HA | CA | N | H2 | 49.2° | 56.1° |
HA | CA | C3 | O3 | 108.7° | 175.0° |