0A9
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
N | CA | sing | 1.47Å | 1.46Å | |
N | H | sing | 1.01Å | 1.00Å | |
N | H2 | sing | 1.01Å | 1.00Å | |
CA | C | sing | 1.51Å | 1.52Å | |
CA | CB | sing | 1.53Å | 1.53Å | |
CA | HA | sing | 1.09Å | 1.10Å | |
C | O | doub | 1.21Å | 1.24Å | |
C | OXT | sing | 1.34Å | 1.46Å | |
CB | CG | sing | 1.51Å | 1.50Å | |
CB | HBC1 | sing | 1.09Å | 1.10Å | |
CB | HBC2 | sing | 1.09Å | 1.10Å | |
CG | CD1 | sing | 1.38Å | 1.43Å | Aromatic |
CG | CD2 | doub | 1.38Å | 1.42Å | Aromatic |
CD1 | CE1 | doub | 1.38Å | 1.44Å | Aromatic |
CD1 | HD1 | sing | 1.08Å | 1.08Å | |
CD2 | CE2 | sing | 1.38Å | 1.43Å | Aromatic |
CD2 | HD2 | sing | 1.08Å | 1.08Å | |
CE1 | CZ | sing | 1.38Å | 1.44Å | Aromatic |
CE1 | HE1 | sing | 1.08Å | 1.08Å | |
CE2 | CZ | doub | 1.38Å | 1.44Å | Aromatic |
CE2 | HE2 | sing | 1.08Å | 1.08Å | |
CZ | HZ | sing | 1.08Å | 1.08Å | |
CM | HMC1 | sing | 1.09Å | 1.10Å | |
OXT | CM | sing | 1.45Å | 1.38Å | |
CM | HMC2 | sing | 1.09Å | 1.10Å | |
CM | HMC3 | sing | 1.09Å | 1.10Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
CA | N | H | 109.5° | 111.0° |
CA | N | H2 | 109.5° | 111.1° |
N | CA | C | 106.6° | 109.5° |
N | CA | CB | 110.7° | 109.4° |
N | CA | HA | 110.0° | 109.5° |
H | N | H2 | 109.4° | 111.0° |
C | CA | CB | 107.7° | 109.4° |
C | CA | HA | 112.9° | 109.5° |
CA | C | O | 120.5° | 120.1° |
CA | C | OXT | 123.0° | 120.0° |
CB | CA | HA | 109.0° | 109.5° |
CA | CB | CG | 114.8° | 109.4° |
CA | CB | HBC1 | 107.7° | 109.5° |
CA | CB | HBC2 | 107.7° | 109.4° |
O | C | OXT | 116.4° | 120.0° |
C | OXT | CM | 122.5° | 117.0° |
CG | CB | HBC1 | 107.7° | 109.5° |
CG | CB | HBC2 | 107.7° | 109.5° |
CB | CG | CD1 | 120.6° | 120.0° |
CB | CG | CD2 | 120.0° | 120.0° |
HBC1 | CB | HBC2 | 111.1° | 109.5° |
CD1 | CG | CD2 | 119.3° | 120.0° |
CG | CD1 | CE1 | 120.7° | 120.0° |
CG | CD1 | HD1 | 119.6° | 120.0° |
CG | CD2 | CE2 | 121.1° | 120.0° |
CG | CD2 | HD2 | 119.4° | 120.0° |
CE1 | CD1 | HD1 | 119.6° | 120.0° |
CD1 | CE1 | CZ | 119.5° | 120.0° |
CD1 | CE1 | HE1 | 120.2° | 120.0° |
CE2 | CD2 | HD2 | 119.4° | 120.0° |
CD2 | CE2 | CZ | 119.5° | 120.0° |
CD2 | CE2 | HE2 | 120.2° | 120.0° |
CZ | CE1 | HE1 | 120.2° | 120.0° |
CE1 | CZ | CE2 | 119.8° | 120.0° |
CE1 | CZ | HZ | 120.1° | 120.0° |
CZ | CE2 | HE2 | 120.3° | 120.0° |
CE2 | CZ | HZ | 120.1° | 120.1° |
HMC1 | CM | OXT | 109.5° | 109.5° |
HMC1 | CM | HMC2 | 109.5° | 109.4° |
HMC1 | CM | HMC3 | 109.4° | 109.4° |
OXT | CM | HMC2 | 109.5° | 109.5° |
OXT | CM | HMC3 | 109.5° | 109.5° |
HMC2 | CM | HMC3 | 109.5° | 109.5° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
CA | N | H | H2 | 120.0° | 124.0° |
N | CA | C | CB | 118.8° | 119.9° |
N | CA | C | HA | 120.9° | 120.0° |
N | CA | CB | HA | 121.1° | 120.0° |
N | CA | C | O | 145.0° | 19.9° |
N | CA | C | OXT | 39.4° | 160.0° |
N | CA | CB | CG | 84.3° | 65.0° |
N | CA | CB | HBC1 | 35.8° | 55.0° |
N | CA | CB | HBC2 | 155.7° | 175.0° |
H | N | CA | C | 180.0° | 60.0° |
H | N | CA | CB | 63.2° | 60.0° |
H | N | CA | HA | 57.3° | 180.0° |
H2 | N | CA | C | 60.0° | 176.1° |
H2 | N | CA | CB | 176.8° | 64.0° |
H2 | N | CA | HA | 62.7° | 56.0° |
C | CA | CB | HA | 122.7° | 120.1° |
CA | C | O | OXT | 175.9° | 180.0° |
C | CA | CB | CG | 159.6° | 175.0° |
C | CA | CB | HBC1 | 80.4° | 65.0° |
C | CA | CB | HBC2 | 39.6° | 55.1° |
CA | C | OXT | CM | 176.6° | 180.0° |
CB | CA | C | O | 96.2° | 100.0° |
CB | CA | C | OXT | 79.4° | 80.0° |
CA | CB | CG | HBC1 | 120.0° | 120.0° |
CA | CB | CG | HBC2 | 120.0° | 119.9° |
CA | CB | HBC1 | HBC2 | 117.8° | 120.0° |
CA | CB | CG | CD1 | 74.4° | 90.0° |
CA | CB | CG | CD2 | 108.2° | 90.2° |
HA | CA | C | O | 24.1° | 140.0° |
HA | CA | C | OXT | 160.3° | 40.0° |
HA | CA | CB | CG | 36.8° | 55.0° |
HA | CA | CB | HBC1 | 156.9° | 175.0° |
HA | CA | CB | HBC2 | 83.2° | 65.0° |
O | C | OXT | CM | 0.8° | 0.0° |
C | OXT | CM | HMC1 | 180.0° | 60.0° |
C | OXT | CM | HMC2 | 60.0° | 60.0° |
C | OXT | CM | HMC3 | 60.0° | 180.0° |
CG | CB | HBC1 | HBC2 | 117.8° | 120.0° |
CB | CG | CD1 | CD2 | 177.4° | 179.7° |
CB | CG | CD1 | CE1 | 177.1° | 180.0° |
CB | CG | CD1 | HD1 | 2.9° | 0.1° |
CB | CG | CD2 | CE2 | 177.1° | 180.0° |
CB | CG | CD2 | HD2 | 2.9° | 0.0° |
HBC1 | CB | CG | CD1 | 165.6° | 30.0° |
HBC1 | CB | CG | CD2 | 11.8° | 149.7° |
HBC2 | CB | CG | CD1 | 45.6° | 150.0° |
HBC2 | CB | CG | CD2 | 131.8° | 29.7° |
CG | CD1 | CE1 | HD1 | 180.0° | 179.9° |
CD1 | CG | CD2 | CE2 | 0.3° | 0.2° |
CD1 | CG | CD2 | HD2 | 179.7° | 179.7° |
CG | CD1 | CE1 | CZ | 0.2° | 0.0° |
CG | CD1 | CE1 | HE1 | 179.9° | 180.0° |
CD2 | CG | CD1 | CE1 | 0.3° | 0.3° |
CD2 | CG | CD1 | HD1 | 179.7° | 179.8° |
CG | CD2 | CE2 | HD2 | 180.0° | 179.9° |
CG | CD2 | CE2 | CZ | 0.2° | 0.0° |
CG | CD2 | CE2 | HE2 | 179.8° | 180.0° |
CD1 | CE1 | CZ | HE1 | 180.0° | 180.0° |
CD1 | CE1 | CZ | CE2 | 0.0° | 0.2° |
CD1 | CE1 | CZ | HZ | 180.0° | 180.0° |
HD1 | CD1 | CE1 | CZ | 179.9° | 180.0° |
HD1 | CD1 | CE1 | HE1 | 0.1° | 0.0° |
CD2 | CE2 | CZ | CE1 | 0.1° | 0.3° |
CD2 | CE2 | CZ | HE2 | 180.0° | 180.0° |
CD2 | CE2 | CZ | HZ | 180.0° | 180.0° |
HD2 | CD2 | CE2 | CZ | 179.8° | 180.0° |
HD2 | CD2 | CE2 | HE2 | 0.2° | 0.1° |
CE1 | CZ | CE2 | HZ | 180.0° | 179.7° |
CE1 | CZ | CE2 | HE2 | 179.9° | 179.8° |
HE1 | CE1 | CZ | CE2 | 180.0° | 179.7° |
HE1 | CE1 | CZ | HZ | 0.0° | 0.0° |
HE2 | CE2 | CZ | HZ | 0.1° | 0.0° |
HMC1 | CM | OXT | HMC2 | 120.0° | 120.0° |
HMC1 | CM | OXT | HMC3 | 120.0° | 120.0° |
HMC1 | CM | HMC2 | HMC3 | 120.0° | 119.9° |
OXT | CM | HMC2 | HMC3 | 120.0° | 120.1° |