0A1
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
N | CA | sing | 1.47Å | 1.45Å | |
N | H | sing | 1.01Å | 1.00Å | |
N | H2 | sing | 1.01Å | 1.00Å | |
CA | C | sing | 1.51Å | 1.54Å | |
CA | CB | sing | 1.53Å | 1.54Å | |
CA | HA | sing | 1.09Å | 1.10Å | |
CB | CG | sing | 1.51Å | 1.52Å | |
CB | HBC1 | sing | 1.09Å | 1.10Å | |
CB | HBC2 | sing | 1.09Å | 1.10Å | |
CG | CD1 | sing | 1.38Å | 1.39Å | Aromatic |
CG | CD2 | doub | 1.38Å | 1.39Å | Aromatic |
CD1 | CE1 | doub | 1.38Å | 1.38Å | Aromatic |
CD1 | HD1 | sing | 1.08Å | 1.08Å | |
CE1 | CZ | sing | 1.39Å | 1.38Å | Aromatic |
CE1 | HE1 | sing | 1.08Å | 1.08Å | |
CZ | OH | sing | 1.36Å | 1.38Å | |
OH | CM | sing | 1.43Å | 1.43Å | |
CM | HMC1 | sing | 1.09Å | 1.10Å | |
CM | HMC2 | sing | 1.09Å | 1.10Å | |
CM | HMC3 | sing | 1.09Å | 1.10Å | |
CE2 | CZ | doub | 1.39Å | 1.39Å | Aromatic |
CE2 | HE2 | sing | 1.08Å | 1.08Å | |
CD2 | CE2 | sing | 1.38Å | 1.38Å | Aromatic |
CD2 | HD2 | sing | 1.08Å | 1.08Å | |
C | OXT | sing | 1.34Å | 1.24Å | |
C | O | doub | 1.21Å | 1.24Å | |
HXT | OXT | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
CA | N | H | 109.5° | 111.0° |
CA | N | H2 | 109.4° | 111.0° |
N | CA | C | 109.8° | 109.5° |
N | CA | CB | 110.2° | 109.5° |
N | CA | HA | 109.8° | 109.5° |
H | N | H2 | 109.4° | 111.0° |
C | CA | CB | 112.6° | 109.5° |
C | CA | HA | 107.3° | 109.5° |
CA | C | OXT | 120.3° | 120.0° |
CA | C | O | 117.5° | 120.0° |
CB | CA | HA | 106.9° | 109.4° |
CA | CB | CG | 116.4° | 109.5° |
CA | CB | HBC1 | 107.2° | 109.5° |
CA | CB | HBC2 | 105.6° | 109.5° |
CG | CB | HBC1 | 107.2° | 109.5° |
CG | CB | HBC2 | 105.6° | 109.4° |
CB | CG | CD1 | 121.4° | 119.9° |
CB | CG | CD2 | 120.5° | 119.9° |
HBC1 | CB | HBC2 | 115.1° | 109.5° |
CD1 | CG | CD2 | 118.1° | 120.1° |
CG | CD1 | CE1 | 121.3° | 120.0° |
CG | CD1 | HD1 | 119.4° | 120.0° |
CG | CD2 | CE2 | 121.2° | 120.0° |
CG | CD2 | HD2 | 119.4° | 120.0° |
CE1 | CD1 | HD1 | 119.3° | 120.0° |
CD1 | CE1 | CZ | 119.7° | 120.0° |
CD1 | CE1 | HE1 | 120.1° | 120.0° |
CZ | CE1 | HE1 | 120.2° | 120.0° |
CE1 | CZ | OH | 118.8° | 120.1° |
CE1 | CZ | CE2 | 120.3° | 119.9° |
CZ | OH | CM | 135.0° | 117.0° |
OH | CZ | CE2 | 120.8° | 120.1° |
OH | CM | HMC1 | 109.5° | 109.5° |
OH | CM | HMC2 | 109.4° | 109.5° |
OH | CM | HMC3 | 109.5° | 109.4° |
HMC1 | CM | HMC2 | 109.5° | 109.4° |
HMC1 | CM | HMC3 | 109.5° | 109.5° |
HMC2 | CM | HMC3 | 109.5° | 109.5° |
CZ | CE2 | HE2 | 120.3° | 120.0° |
CZ | CE2 | CD2 | 119.4° | 120.0° |
HE2 | CE2 | CD2 | 120.3° | 120.0° |
CE2 | CD2 | HD2 | 119.4° | 119.9° |
OXT | C | O | 122.0° | 120.0° |
C | OXT | HXT | 109.5° | 117.0° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
CA | N | H | H2 | 120.0° | 124.0° |
N | CA | C | CB | 123.3° | 120.0° |
N | CA | C | HA | 119.3° | 120.0° |
N | CA | CB | HA | 119.3° | 120.0° |
N | CA | CB | CG | 52.1° | 65.0° |
N | CA | CB | HBC1 | 172.1° | 55.0° |
N | CA | CB | HBC2 | 64.7° | 175.1° |
N | CA | C | OXT | 158.4° | 160.0° |
N | CA | C | O | 17.0° | 20.0° |
H | N | CA | C | 125.0° | 60.0° |
H | N | CA | CB | 110.3° | 60.0° |
H | N | CA | HA | 7.2° | 180.0° |
H2 | N | CA | C | 5.1° | 176.1° |
H2 | N | CA | CB | 129.8° | 63.9° |
H2 | N | CA | HA | 112.7° | 56.0° |
C | CA | CB | HA | 117.6° | 120.0° |
C | CA | CB | CG | 70.9° | 175.0° |
C | CA | CB | HBC1 | 49.0° | 65.0° |
C | CA | CB | HBC2 | 172.3° | 55.0° |
CA | C | OXT | O | 175.2° | 180.0° |
CA | C | OXT | HXT | 175.2° | 180.0° |
CA | CB | CG | HBC1 | 120.0° | 120.0° |
CA | CB | CG | HBC2 | 116.8° | 120.0° |
CA | CB | HBC1 | HBC2 | 117.2° | 120.0° |
CA | CB | CG | CD1 | 2.7° | 90.0° |
CA | CB | CG | CD2 | 175.8° | 90.2° |
CB | CA | C | OXT | 78.3° | 80.0° |
CB | CA | C | O | 106.3° | 100.0° |
HA | CA | CB | CG | 171.4° | 55.0° |
HA | CA | CB | HBC1 | 68.6° | 175.0° |
HA | CA | CB | HBC2 | 54.6° | 65.0° |
HA | CA | C | OXT | 39.1° | 40.0° |
HA | CA | C | O | 136.3° | 140.0° |
CG | CB | HBC1 | HBC2 | 117.1° | 120.0° |
CB | CG | CD1 | CD2 | 178.6° | 179.8° |
CB | CG | CD1 | CE1 | 178.3° | 179.9° |
CB | CG | CD1 | HD1 | 1.7° | 0.0° |
CB | CG | CD2 | CE2 | 178.2° | 179.7° |
CB | CG | CD2 | HD2 | 1.8° | 0.1° |
HBC1 | CB | CG | CD1 | 122.7° | 30.0° |
HBC1 | CB | CG | CD2 | 55.8° | 149.8° |
HBC2 | CB | CG | CD1 | 114.1° | 150.0° |
HBC2 | CB | CG | CD2 | 67.4° | 29.8° |
CG | CD1 | CE1 | HD1 | 180.0° | 179.9° |
CG | CD1 | CE1 | CZ | 0.1° | 0.1° |
CG | CD1 | CE1 | HE1 | 179.9° | 180.0° |
CD1 | CG | CD2 | CE2 | 0.4° | 0.5° |
CD1 | CG | CD2 | HD2 | 179.6° | 179.7° |
CD2 | CG | CD1 | CE1 | 0.3° | 0.3° |
CD2 | CG | CD1 | HD1 | 179.7° | 179.8° |
CG | CD2 | CE2 | CZ | 0.4° | 0.5° |
CG | CD2 | CE2 | HE2 | 179.6° | 179.8° |
CG | CD2 | CE2 | HD2 | 180.0° | 179.8° |
CD1 | CE1 | CZ | HE1 | 180.0° | 179.9° |
CD1 | CE1 | CZ | OH | 179.9° | 180.0° |
CD1 | CE1 | CZ | CE2 | 0.0° | 0.0° |
HD1 | CD1 | CE1 | CZ | 179.9° | 180.0° |
HD1 | CD1 | CE1 | HE1 | 0.1° | 0.1° |
CE1 | CZ | OH | CE2 | 180.0° | 180.0° |
CE1 | CZ | OH | CM | 65.7° | 180.0° |
CE1 | CZ | CE2 | HE2 | 179.9° | 180.0° |
CE1 | CZ | CE2 | CD2 | 0.2° | 0.3° |
HE1 | CE1 | CZ | OH | 0.1° | 0.0° |
HE1 | CE1 | CZ | CE2 | 180.0° | 180.0° |
CZ | OH | CM | HMC1 | 32.6° | 180.0° |
CZ | OH | CM | HMC2 | 87.4° | 60.0° |
CZ | OH | CM | HMC3 | 152.6° | 60.0° |
OH | CZ | CE2 | HE2 | 0.2° | 0.0° |
OH | CZ | CE2 | CD2 | 179.8° | 179.7° |
OH | CM | HMC1 | HMC2 | 120.0° | 120.0° |
OH | CM | HMC1 | HMC3 | 120.0° | 120.0° |
OH | CM | HMC2 | HMC3 | 120.0° | 120.0° |
CM | OH | CZ | CE2 | 114.4° | 0.0° |
HMC1 | CM | HMC2 | HMC3 | 120.0° | 120.0° |
CZ | CE2 | HE2 | CD2 | 180.0° | 179.7° |
CZ | CE2 | CD2 | HD2 | 179.6° | 179.7° |
HE2 | CE2 | CD2 | HD2 | 0.4° | 0.0° |
O | C | OXT | HXT | 0.0° | 0.0° |