08T
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| O3' | C3' | sing | 1.43Å | 1.41Å | |
| O2' | C2' | sing | 1.43Å | 1.43Å | |
| C3' | C4' | sing | 1.54Å | 1.43Å | |
| C3' | C2' | sing | 1.55Å | 1.40Å | |
| C4' | C5' | sing | 1.53Å | 1.46Å | |
| C4' | O4' | sing | 1.44Å | 1.38Å | |
| C2' | C1' | sing | 1.55Å | 1.47Å | |
| C5' | O5' | sing | 1.43Å | 1.41Å | |
| O4' | C1' | sing | 1.44Å | 1.41Å | |
| C1' | N9 | sing | 1.47Å | 1.48Å | |
| N3 | C2 | doub | 1.32Å | 1.35Å | Aromatic |
| N3 | C4 | sing | 1.33Å | 1.39Å | Aromatic |
| O2A | PA | doub | 1.48Å | 1.51Å | |
| C2 | N1 | sing | 1.32Å | 1.33Å | Aromatic |
| O5' | PA | sing | 1.61Å | 1.49Å | |
| C4 | N9 | sing | 1.37Å | 1.43Å | Aromatic |
| C4 | C5 | doub | 1.40Å | 1.43Å | Aromatic |
| N9 | C8 | sing | 1.36Å | 1.33Å | Aromatic |
| PA | O1A | sing | 1.61Å | 1.54Å | |
| PA | O3A | sing | 1.61Å | 1.60Å | |
| N1 | C6 | doub | 1.33Å | 1.32Å | Aromatic |
| C5 | C6 | sing | 1.41Å | 1.39Å | Aromatic |
| C5 | N7 | sing | 1.35Å | 1.32Å | Aromatic |
| O3A | PB | sing | 1.61Å | 1.54Å | |
| C8 | N7 | doub | 1.30Å | 1.32Å | Aromatic |
| C6 | N6 | sing | 1.38Å | 1.42Å | |
| O1B | PB | doub | 1.48Å | 1.47Å | |
| PB | O3B | sing | 1.61Å | 1.60Å | |
| PB | O2B | sing | 1.61Å | 1.58Å | |
| F1 | BE | sing | 1.39Å | 1.37Å | |
| BE | F3 | sing | 1.39Å | 1.40Å | |
| O3B | BE | sing | 1.44Å | 1.44Å | |
| BE | F2 | sing | 1.39Å | 1.40Å | |
| C5' | H1 | sing | 1.09Å | 1.10Å | |
| C5' | H2 | sing | 1.09Å | 1.10Å | |
| C4' | H3 | sing | 1.09Å | 1.10Å | |
| C3' | H4 | sing | 1.09Å | 1.10Å | |
| O3' | H5 | sing | 0.97Å | 0.95Å | |
| C2' | H6 | sing | 1.09Å | 1.10Å | |
| O2' | H7 | sing | 0.97Å | 0.95Å | |
| C1' | H8 | sing | 1.09Å | 1.10Å | |
| O1A | H9 | sing | 0.97Å | 0.95Å | |
| C2 | H10 | sing | 1.08Å | 1.08Å | |
| O2B | H11 | sing | 0.97Å | 0.95Å | |
| N6 | H12 | sing | 0.97Å | 1.00Å | |
| N6 | H13 | sing | 0.97Å | 1.00Å | |
| C8 | H14 | sing | 1.08Å | 1.08Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| O3' | C3' | C4' | 106.3° | 110.5° |
| O3' | C3' | C2' | 111.6° | 110.5° |
| O3' | C3' | H4 | 109.4° | 110.5° |
| C3' | O3' | H5 | 109.5° | 114.0° |
| O2' | C2' | C3' | 108.3° | 110.9° |
| O2' | C2' | C1' | 109.8° | 110.9° |
| O2' | C2' | H6 | 110.3° | 110.8° |
| C2' | O2' | H7 | 109.5° | 114.0° |
| C4' | C3' | C2' | 106.9° | 104.2° |
| C3' | C4' | C5' | 106.4° | 109.9° |
| C3' | C4' | O4' | 106.7° | 107.3° |
| C3' | C4' | H3 | 114.6° | 110.0° |
| C4' | C3' | H4 | 113.9° | 110.4° |
| C3' | C2' | C1' | 110.3° | 102.1° |
| C2' | C3' | H4 | 108.8° | 110.5° |
| C3' | C2' | H6 | 109.8° | 110.9° |
| C5' | C4' | O4' | 113.2° | 109.9° |
| C4' | C5' | O5' | 115.9° | 109.5° |
| C4' | C5' | H1 | 107.4° | 109.5° |
| C4' | C5' | H2 | 107.4° | 109.5° |
| C5' | C4' | H3 | 108.2° | 109.8° |
| C4' | O4' | C1' | 113.0° | 107.0° |
| O4' | C4' | H3 | 107.9° | 109.9° |
| C2' | C1' | O4' | 102.2° | 103.5° |
| C2' | C1' | N9 | 112.7° | 110.6° |
| C1' | C2' | H6 | 108.4° | 111.0° |
| C2' | C1' | H8 | 111.5° | 110.6° |
| C5' | O5' | PA | 116.5° | 123.0° |
| O5' | C5' | H1 | 107.4° | 109.5° |
| O5' | C5' | H2 | 107.4° | 109.5° |
| O4' | C1' | N9 | 107.4° | 110.6° |
| O4' | C1' | H8 | 116.5° | 110.7° |
| C1' | N9 | C4 | 86.9° | 126.3° |
| C1' | N9 | C8 | 164.3° | 126.3° |
| N9 | C1' | H8 | 106.6° | 110.7° |
| C2 | N3 | C4 | 126.5° | 120.6° |
| N3 | C2 | N1 | 120.7° | 122.5° |
| N3 | C2 | H10 | 119.7° | 118.8° |
| N3 | C4 | N9 | 149.3° | 134.9° |
| N3 | C4 | C5 | 109.0° | 119.1° |
| O2A | PA | O5' | 106.4° | 109.5° |
| O2A | PA | O1A | 108.4° | 109.5° |
| O2A | PA | O3A | 114.7° | 109.5° |
| C2 | N1 | C6 | 119.1° | 121.2° |
| N1 | C2 | H10 | 119.6° | 118.7° |
| O5' | PA | O1A | 113.2° | 109.5° |
| O5' | PA | O3A | 104.8° | 109.5° |
| N9 | C4 | C5 | 101.7° | 106.0° |
| C4 | N9 | C8 | 108.2° | 107.4° |
| C4 | C5 | C6 | 124.4° | 118.2° |
| C4 | C5 | N7 | 110.4° | 107.1° |
| N9 | C8 | N7 | 110.8° | 110.0° |
| N9 | C8 | H14 | 124.6° | 125.0° |
| O1A | PA | O3A | 109.3° | 109.4° |
| PA | O1A | H9 | 109.5° | 114.0° |
| PA | O3A | PB | 122.7° | 134.0° |
| N1 | C6 | C5 | 120.2° | 118.4° |
| N1 | C6 | N6 | 120.2° | 120.8° |
| C6 | C5 | N7 | 125.1° | 134.7° |
| C5 | C6 | N6 | 119.5° | 120.7° |
| C5 | N7 | C8 | 108.8° | 109.5° |
| O3A | PB | O1B | 109.7° | 109.5° |
| O3A | PB | O3B | 110.3° | 109.5° |
| O3A | PB | O2B | 107.2° | 109.5° |
| N7 | C8 | H14 | 124.6° | 125.0° |
| C6 | N6 | H12 | 109.5° | 120.0° |
| C6 | N6 | H13 | 109.5° | 120.1° |
| O1B | PB | O3B | 107.6° | 109.5° |
| O1B | PB | O2B | 112.5° | 109.5° |
| O3B | PB | O2B | 109.6° | 109.5° |
| PB | O3B | BE | 122.4° | 114.0° |
| PB | O2B | H11 | 109.5° | 114.0° |
| F1 | BE | F3 | 110.3° | 109.5° |
| F1 | BE | O3B | 110.6° | 109.5° |
| F1 | BE | F2 | 111.2° | 109.5° |
| F3 | BE | O3B | 109.9° | 109.4° |
| F3 | BE | F2 | 107.1° | 109.4° |
| O3B | BE | F2 | 107.7° | 109.5° |
| H1 | C5' | H2 | 111.5° | 109.4° |
| H12 | N6 | H13 | 109.4° | 120.0° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| O3' | C3' | C2' | O2' | 7.5° | 20.4° |
| O3' | C3' | C4' | C2' | 119.3° | 118.7° |
| O3' | C3' | C4' | H4 | 120.6° | 122.7° |
| O3' | C3' | C2' | H4 | 120.8° | 122.7° |
| O3' | C3' | C4' | C5' | 127.2° | 119.8° |
| O3' | C3' | C4' | O4' | 111.6° | 120.7° |
| O3' | C3' | C2' | C1' | 112.6° | 97.8° |
| O3' | C3' | C4' | H3 | 7.7° | 1.2° |
| O3' | C3' | C2' | H6 | 128.1° | 143.9° |
| O2' | C2' | C3' | C4' | 123.3° | 139.1° |
| O2' | C2' | C3' | C1' | 120.1° | 118.2° |
| O2' | C2' | C3' | H6 | 120.5° | 123.5° |
| O2' | C2' | C1' | H6 | 120.6° | 123.6° |
| O2' | C2' | C1' | O4' | 116.8° | 155.2° |
| O2' | C2' | C1' | N9 | 128.2° | 86.3° |
| O2' | C2' | C3' | H4 | 113.3° | 102.3° |
| O2' | C2' | C1' | H8 | 8.3° | 36.7° |
| C4' | C3' | C2' | H4 | 123.4° | 118.6° |
| C3' | C4' | C5' | O4' | 116.9° | 117.8° |
| C3' | C4' | C5' | H3 | 123.6° | 121.1° |
| C3' | C4' | O4' | H3 | 123.6° | 119.5° |
| C4' | C3' | C2' | C1' | 3.2° | 20.9° |
| C3' | C4' | C5' | O5' | 87.6° | 175.7° |
| C3' | C4' | O4' | C1' | 9.8° | 26.5° |
| C3' | C4' | C5' | H1 | 152.4° | 64.3° |
| C3' | C4' | C5' | H2 | 32.4° | 55.7° |
| C4' | C3' | O3' | H5 | 180.0° | 180.0° |
| C4' | C3' | C2' | H6 | 116.2° | 97.3° |
| C2' | C3' | C4' | C5' | 113.5° | 121.4° |
| C2' | C3' | C4' | O4' | 7.7° | 2.0° |
| C3' | C2' | C1' | H6 | 120.2° | 118.2° |
| C3' | C2' | C1' | O4' | 2.4° | 37.1° |
| C3' | C2' | C1' | N9 | 112.6° | 155.5° |
| C2' | C3' | C4' | H3 | 127.0° | 117.5° |
| C2' | C3' | O3' | H5 | 63.8° | 65.2° |
| C3' | C2' | O2' | H7 | 180.0° | 61.5° |
| C3' | C2' | C1' | H8 | 127.5° | 81.5° |
| C5' | C4' | O4' | H3 | 119.7° | 121.0° |
| C4' | C5' | O5' | H1 | 120.0° | 120.0° |
| C4' | C5' | O5' | H2 | 120.0° | 120.0° |
| C5' | C4' | O4' | C1' | 106.9° | 146.0° |
| C4' | C5' | O5' | PA | 179.5° | 180.0° |
| C4' | C5' | H1 | H2 | 117.3° | 120.0° |
| C5' | C4' | C3' | H4 | 6.7° | 2.8° |
| C4' | O4' | C1' | C2' | 7.5° | 40.1° |
| O4' | C4' | C5' | O5' | 29.3° | 66.5° |
| C4' | O4' | C1' | N9 | 111.3° | 158.6° |
| O4' | C4' | C5' | H1 | 90.7° | 53.6° |
| O4' | C4' | C5' | H2 | 149.3° | 173.5° |
| O4' | C4' | C3' | H4 | 127.8° | 116.6° |
| C4' | O4' | C1' | H8 | 129.3° | 78.4° |
| C2' | C1' | O4' | N9 | 118.8° | 118.5° |
| C2' | C1' | O4' | H8 | 121.8° | 118.5° |
| C2' | C1' | N9 | H8 | 122.6° | 122.9° |
| C2' | C1' | N9 | C4 | 61.2° | 89.5° |
| C2' | C1' | N9 | C8 | 134.3° | 90.6° |
| C1' | C2' | C3' | H4 | 126.6° | 139.5° |
| C1' | C2' | O2' | H7 | 59.6° | 174.1° |
| C5' | O5' | PA | O2A | 9.0° | 55.0° |
| C5' | O5' | PA | O1A | 128.0° | 65.0° |
| C5' | O5' | PA | O3A | 112.9° | 175.0° |
| O5' | C5' | H1 | H2 | 117.4° | 120.0° |
| O5' | C5' | C4' | H3 | 148.8° | 54.6° |
| O4' | C1' | N9 | H8 | 125.5° | 123.0° |
| O4' | C1' | N9 | C4 | 173.0° | 156.4° |
| O4' | C1' | N9 | C8 | 22.5° | 23.5° |
| C1' | O4' | C4' | H3 | 133.4° | 93.0° |
| O4' | C1' | C2' | H6 | 122.6° | 81.1° |
| C1' | N9 | C4 | N3 | 4.5° | 0.1° |
| C1' | N9 | C4 | C8 | 175.7° | 179.9° |
| C1' | N9 | C4 | C5 | 178.7° | 180.0° |
| C1' | N9 | C8 | N7 | 167.4° | 180.0° |
| N9 | C1' | C2' | H6 | 7.6° | 37.3° |
| C1' | N9 | C8 | H14 | 12.6° | 0.1° |
| N3 | C2 | N1 | H10 | 180.0° | 179.9° |
| C2 | N3 | C4 | N9 | 176.9° | 180.0° |
| C2 | N3 | C4 | C5 | 0.2° | 0.0° |
| N3 | C2 | N1 | C6 | 0.1° | 0.1° |
| C4 | N3 | C2 | N1 | 0.1° | 0.1° |
| N3 | C4 | N9 | C5 | 176.8° | 180.0° |
| N3 | C4 | N9 | C8 | 179.8° | 180.0° |
| N3 | C4 | C5 | C6 | 0.2° | 0.0° |
| N3 | C4 | C5 | N7 | 179.8° | 180.0° |
| C4 | N3 | C2 | H10 | 179.9° | 180.0° |
| O2A | PA | O5' | O1A | 119.0° | 120.0° |
| O2A | PA | O5' | O3A | 121.9° | 120.0° |
| O2A | PA | O1A | O3A | 125.7° | 120.0° |
| O2A | PA | O3A | PB | 72.9° | 45.0° |
| O2A | PA | O1A | H9 | 0.0° | 180.0° |
| C2 | N1 | C6 | C5 | 0.1° | 0.1° |
| C2 | N1 | C6 | N6 | 179.9° | 180.0° |
| O5' | PA | O1A | O3A | 116.5° | 120.0° |
| O5' | PA | O3A | PB | 170.7° | 165.0° |
| PA | O5' | C5' | H1 | 59.5° | 60.0° |
| PA | O5' | C5' | H2 | 60.5° | 60.0° |
| O5' | PA | O1A | H9 | 117.9° | 60.0° |
| N9 | C4 | C5 | C6 | 178.5° | 180.0° |
| N9 | C4 | C5 | N7 | 1.5° | 0.0° |
| C4 | N9 | C8 | N7 | 3.6° | 0.0° |
| C4 | N9 | C1' | H8 | 61.5° | 33.4° |
| C4 | N9 | C8 | H14 | 176.3° | 179.9° |
| C5 | C4 | N9 | C8 | 3.0° | 0.0° |
| C4 | C5 | C6 | N1 | 0.2° | 0.1° |
| C4 | C5 | C6 | N7 | 180.0° | 179.9° |
| C4 | C5 | N7 | C8 | 0.6° | 0.0° |
| C4 | C5 | C6 | N6 | 180.0° | 180.0° |
| N9 | C8 | N7 | C5 | 2.7° | 0.0° |
| N9 | C8 | N7 | H14 | 180.0° | 179.9° |
| C8 | N9 | C1' | H8 | 103.0° | 146.5° |
| O1A | PA | O3A | PB | 49.0° | 75.0° |
| PA | O3A | PB | O1B | 44.8° | 40.0° |
| PA | O3A | PB | O3B | 163.1° | 160.0° |
| PA | O3A | PB | O2B | 77.6° | 80.0° |
| O3A | PA | O1A | H9 | 125.7° | 60.0° |
| N1 | C6 | C5 | N6 | 179.8° | 179.9° |
| N1 | C6 | C5 | N7 | 179.8° | 180.0° |
| C6 | N1 | C2 | H10 | 179.9° | 180.0° |
| N1 | C6 | N6 | H12 | 0.0° | 0.0° |
| N1 | C6 | N6 | H13 | 120.0° | 180.0° |
| C6 | C5 | N7 | C8 | 179.4° | 180.0° |
| C5 | C6 | N6 | H12 | 179.8° | 179.9° |
| C5 | C6 | N6 | H13 | 60.3° | 0.0° |
| N7 | C5 | C6 | N6 | 0.0° | 0.1° |
| C5 | N7 | C8 | H14 | 177.3° | 179.9° |
| O3A | PB | O1B | O3B | 120.0° | 120.0° |
| O3A | PB | O1B | O2B | 119.2° | 120.0° |
| O3A | PB | O3B | O2B | 117.8° | 120.0° |
| O3A | PB | O3B | BE | 127.7° | 180.0° |
| O3A | PB | O2B | H11 | 120.6° | 60.0° |
| C6 | N6 | H12 | H13 | 120.0° | 180.0° |
| O1B | PB | O3B | O2B | 122.7° | 120.0° |
| O1B | PB | O3B | BE | 8.1° | 60.0° |
| O1B | PB | O2B | H11 | 0.0° | 180.0° |
| PB | O3B | BE | F1 | 12.0° | 180.0° |
| PB | O3B | BE | F3 | 134.0° | 60.0° |
| PB | O3B | BE | F2 | 109.7° | 60.0° |
| O3B | PB | O2B | H11 | 119.7° | 60.0° |
| O2B | PB | O3B | BE | 114.5° | 60.0° |
| F1 | BE | F3 | O3B | 122.2° | 120.0° |
| F1 | BE | F3 | F2 | 121.2° | 120.0° |
| F1 | BE | O3B | F2 | 121.7° | 120.0° |
| F3 | BE | O3B | F2 | 116.3° | 120.0° |
| H1 | C5' | C4' | H3 | 28.8° | 174.6° |
| H2 | C5' | C4' | H3 | 91.1° | 65.4° |
| H3 | C4' | C3' | H4 | 112.8° | 123.9° |
| H4 | C3' | O3' | H5 | 56.6° | 57.4° |
| H4 | C3' | C2' | H6 | 7.2° | 21.3° |
| H6 | C2' | O2' | H7 | 59.8° | 62.1° |
| H6 | C2' | C1' | H8 | 112.3° | 160.3° |
