Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

08R

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C07C04sing1.51Å1.51Å
C04C03doub1.38Å1.40ÅAromatic
C04C05sing1.39Å1.39ÅAromatic
C03C02sing1.39Å1.41ÅAromatic
C05C06doub1.38Å1.40ÅAromatic
C02N02sing1.39Å1.35Å
C02N01doub1.32Å1.37ÅAromatic
C06N01sing1.32Å1.35ÅAromatic
C06C08sing1.51Å1.54Å
C3'C2'sing1.54Å1.52Å
C3'C08sing1.53Å1.54Å
C3'C4'sing1.54Å1.52Å
C2'N1'sing1.49Å1.46Å
C10O09sing1.43Å1.42Å
C10C11sing1.53Å1.51Å
C4'O09sing1.43Å1.42Å
C4'C5'sing1.54Å1.54Å
N1'C5'sing1.49Å1.46Å
C11N12sing1.47Å1.45Å
N12C13sing1.47Å1.47Å
C13C21sing1.51Å1.52Å
O22C22sing1.36Å1.39Å
O22C27sing1.43Å1.44Å
C21C22doub1.39Å1.50ÅAromatic
C21C26sing1.38Å1.40ÅAromatic
C22C23sing1.39Å1.40ÅAromatic
C26C25doub1.38Å1.39ÅAromatic
C23C24doub1.38Å1.40ÅAromatic
C25C24sing1.38Å1.40ÅAromatic
N02H1sing0.97Å1.00Å
N02H2sing0.97Å1.00Å
C03H3sing1.08Å1.08Å
C07H4sing1.09Å1.10Å
C07H5sing1.09Å1.10Å
C07H6sing1.09Å1.10Å
C05H7sing1.08Å1.08Å
C08H8sing1.09Å1.10Å
C08H9sing1.09Å1.10Å
C3'H10sing1.09Å1.10Å
C2'H11sing1.09Å1.10Å
C2'H12sing1.09Å1.10Å
N1'H13sing1.01Å1.00Å
C5'H15sing1.09Å1.10Å
C5'H16sing1.09Å1.10Å
C4'H17sing1.09Å1.10Å
C10H18sing1.09Å1.10Å
C10H19sing1.09Å1.10Å
C11H20sing1.09Å1.10Å
C11H21sing1.09Å1.10Å
N12H22sing1.01Å1.00Å
C13H24sing1.09Å1.10Å
C13H25sing1.09Å1.10Å
C27H26sing1.09Å1.10Å
C27H27sing1.09Å1.10Å
C27H28sing1.09Å1.10Å
C26H29sing1.08Å1.08Å
C25H30sing1.08Å1.08Å
C24H31sing1.08Å1.08Å
C23H32sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C07C04C03121.0°120.8°
C07C04C05119.2°120.7°
C04C07H4109.5°109.5°
C04C07H5109.5°109.4°
C04C07H6109.5°109.5°
C03C04C05119.8°118.5°
C04C03C02117.6°119.1°
C04C03H3121.2°120.4°
C04C05C06120.8°119.3°
C04C05H7119.6°120.4°
C03C02N02120.0°119.7°
C03C02N01121.3°120.6°
C02C03H3121.2°120.5°
C05C06N01118.9°120.8°
C05C06C08121.0°119.6°
C06C05H7119.6°120.3°
N02C02N01118.6°119.7°
C02N02H1109.5°120.0°
C02N02H2109.5°120.0°
C02N01C06121.5°121.6°
N01C06C08120.1°119.6°
C06C08C3'110.9°109.5°
C06C08H8109.0°109.5°
C06C08H9109.0°109.5°
C2'C3'C08114.1°110.3°
C2'C3'C4'101.9°105.0°
C3'C2'N1'104.3°104.6°
C2'C3'H10112.2°110.3°
C3'C2'H11111.2°110.4°
C3'C2'H12111.2°110.3°
C08C3'C4'111.6°110.3°
C3'C08H8109.0°109.5°
C3'C08H9109.0°109.5°
C08C3'H10102.7°110.3°
C3'C4'O09110.9°110.3°
C3'C4'C5'105.4°105.1°
C4'C3'H10114.7°110.4°
C3'C4'H17112.3°110.3°
C2'N1'C5'112.5°104.2°
N1'C2'H11111.2°110.5°
N1'C2'H12111.2°110.5°
C2'N1'H13108.5°111.0°
O09C10C11109.7°109.5°
C10O09C4'111.4°114.0°
O09C10H18109.4°109.5°
O09C10H19109.4°109.5°
C10C11N12112.0°109.5°
C11C10H18109.4°109.4°
C11C10H19109.4°109.5°
C10C11H20108.6°109.5°
C10C11H21108.6°109.5°
O09C4'C5'112.4°110.3°
O09C4'H17105.3°110.3°
C4'C5'N1'102.7°104.6°
C4'C5'H15111.8°110.4°
C4'C5'H16111.8°110.5°
C5'C4'H17110.8°110.4°
C5'N1'H13108.5°111.0°
N1'C5'H15111.8°110.4°
N1'C5'H16111.8°110.4°
C11N12C13118.6°111.0°
N12C11H20108.7°109.4°
N12C11H21108.6°109.5°
C11N12H22106.6°111.0°
N12C13C21111.2°109.4°
C13N12H22106.6°111.0°
N12C13H24108.9°109.4°
N12C13H25108.9°109.5°
C13C21C22121.2°120.1°
C13C21C26119.5°120.0°
C21C13H24108.9°109.5°
C21C13H25108.9°109.5°
C22O22C27123.0°117.0°
O22C22C21120.6°120.0°
O22C22C23121.0°120.1°
O22C27H26109.5°109.5°
O22C27H27109.4°109.5°
O22C27H28109.5°109.5°
C22C21C26119.3°119.9°
C21C22C23118.4°119.9°
C21C26C25119.7°120.1°
C21C26H29120.1°119.9°
C22C23C24119.8°120.0°
C22C23H32120.1°120.1°
C26C25C24121.3°120.1°
C25C26H29120.2°120.0°
C26C25H30119.4°120.0°
C23C24C25121.5°120.0°
C23C24H31119.3°120.0°
C24C23H32120.1°120.0°
C24C25H30119.3°119.9°
C25C24H31119.3°120.0°
H1N02H2109.5°119.9°
H4C07H5109.5°109.5°
H4C07H6109.5°109.5°
H5C07H6109.4°109.5°
H8C08H9109.9°109.4°
H11C2'H12107.7°110.5°
H15C5'H16107.1°110.3°
H18C10H19109.5°109.5°
H20C11H21110.3°109.5°
H24C13H25110.0°109.5°
H26C27H27109.5°109.5°
H26C27H28109.4°109.5°
H27C27H28109.5°109.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C07C04C03C05179.3°180.0°
C07C04C03C02179.1°179.9°
C07C04C05C06179.5°180.0°
C07C04C03H30.9°0.0°
C04C07H4H5120.0°119.9°
C04C07H4H6120.0°120.0°
C04C07H5H6120.0°120.0°
C07C04C05H70.4°0.0°
C04C03C02H3180.0°180.0°
C03C04C05C060.2°0.0°
C04C03C02N02178.2°180.0°
C04C03C02N011.5°0.2°
C03C04C07H490.3°90.0°
C03C04C07H5149.6°150.0°
C03C04C07H629.7°30.0°
C03C04C05H7179.8°180.0°
C05C04C03C020.2°0.0°
C04C05C06H7180.0°180.0°
C04C05C06N010.7°0.3°
C04C05C06C08179.1°180.0°
C05C04C03H3179.8°180.0°
C05C04C07H490.3°90.0°
C05C04C07H529.7°30.0°
C05C04C07H6149.7°150.0°
C03C02N02N01176.7°179.8°
C03C02N01C062.5°0.5°
C03C02N02H1176.7°179.7°
C03C02N02H256.7°0.0°
C05C06N01C022.1°0.5°
C05C06N01C08178.4°179.8°
C05C06C08C3'88.4°125.0°
C05C06C08H8151.6°115.0°
C05C06C08H931.6°5.0°
N02C02N01C06179.2°179.7°
C02N02H1H2120.0°179.7°
N02C02C03H31.8°0.0°
C02N01C06C08179.5°179.7°
N01C02N02H10.0°0.0°
N01C02N02H2120.0°179.7°
N01C02C03H3178.4°179.7°
N01C06C08C3'90.0°54.8°
N01C06C05H7179.3°179.7°
N01C06C08H830.0°65.3°
N01C06C08H9150.0°174.8°
C06C08C3'C2'64.2°66.5°
C06C08C3'H8120.0°120.0°
C06C08C3'H9120.0°120.0°
C06C08C3'C4'179.1°177.9°
C08C06C05H70.9°0.0°
C06C08H8H9119.4°120.0°
C06C08C3'H1057.5°55.6°
C2'C3'C08C4'114.9°115.6°
C2'C3'C08H10121.7°122.1°
C2'C3'C4'H10121.5°118.9°
C3'C2'N1'H11120.0°118.8°
C3'C2'N1'H12120.0°118.7°
C2'C3'C4'O09158.1°118.9°
C2'C3'C4'C5'36.3°0.0°
C3'C2'N1'C5'16.5°39.5°
C2'C3'C08H855.8°53.5°
C2'C3'C08H9175.8°173.5°
C3'C2'H11H12122.1°122.3°
C3'C2'N1'H13136.4°80.1°
C2'C3'C4'H1784.4°119.0°
C08C3'C4'H10116.3°122.2°
C08C3'C2'N1'88.6°142.7°
C08C3'C4'O0935.9°0.1°
C08C3'C4'C5'85.9°118.9°
C3'C08H8H9119.4°120.0°
C08C3'C2'H11151.5°98.4°
C08C3'C2'H1231.4°24.0°
C08C3'C4'H17153.4°122.1°
C4'C3'C2'N1'31.9°23.8°
C3'C4'O09C10116.7°150.0°
C3'C4'O09C5'117.6°115.7°
C3'C4'O09H17121.7°122.1°
C3'C4'C5'H17121.7°118.9°
C3'C4'C5'N1'26.6°23.9°
C4'C3'C08H859.1°62.1°
C4'C3'C08H960.9°57.9°
C4'C3'C2'H1188.1°142.7°
C4'C3'C2'H12151.9°94.9°
C3'C4'C5'H1593.4°142.6°
C3'C4'C5'H16146.5°95.0°
C2'N1'C5'C4'6.2°39.5°
C2'N1'C5'H13120.0°119.6°
N1'C2'C3'H10155.1°95.1°
N1'C2'H11H12122.1°122.5°
C2'N1'C5'H15113.8°158.3°
C2'N1'C5'H16126.1°79.4°
O09C10C11H18120.0°120.0°
O09C10C11H19120.0°120.0°
C10O09C4'C5'125.7°94.3°
O09C10C11N1244.4°65.0°
C10O09C4'H175.0°27.9°
O09C10H18H19119.9°120.0°
O09C10C11H20164.4°175.0°
O09C10C11H2175.6°55.0°
C11C10O09C4'117.4°180.0°
C10C11N12H20120.0°120.0°
C10C11N12H21120.0°120.1°
C10C11N12C13152.8°180.0°
C11C10H18H19119.9°120.0°
C10C11H20H21119.0°120.0°
C10C11N12H2232.8°56.1°
O09C4'C5'H17117.5°122.1°
O09C4'C5'N1'147.4°142.8°
O09C4'C3'H1080.4°122.2°
O09C4'C5'H1527.4°98.4°
O09C4'C5'H1692.7°23.9°
C4'O09C10H18122.6°60.1°
C4'O09C10H192.6°60.0°
C4'C5'N1'H15120.0°118.8°
C4'C5'N1'H16120.0°118.9°
C5'C4'C3'H10157.8°118.9°
C4'C5'N1'H13113.8°80.0°
C4'C5'H15H16122.8°122.5°
C5'N1'C2'H11103.5°158.3°
C5'N1'C2'H12136.5°79.2°
N1'C5'H15H16122.7°122.3°
N1'C5'C4'H1795.1°95.1°
C11N12C13H22120.0°123.9°
C11N12C13C2175.5°180.0°
N12C11C10H1875.6°55.0°
N12C11C10H19164.4°175.0°
N12C11H20H21119.0°120.0°
C11N12C13H2444.5°60.1°
C11N12C13H25164.5°60.0°
N12C13C21H24120.0°119.9°
N12C13C21H25120.0°120.0°
N12C13C21C22113.1°80.0°
N12C13C21C2666.2°100.3°
C13N12C11H2087.2°60.0°
C13N12C11H2132.8°59.9°
N12C13H24H25119.3°120.0°
C13C21C22O220.4°0.0°
C13C21C22C26179.3°179.7°
C13C21C22C23179.2°180.0°
C13C21C26C25179.5°180.0°
C21C13N12H22164.4°56.1°
C21C13H24H25119.3°120.0°
C13C21C26H290.5°0.0°
O22C22C21C23179.5°180.0°
O22C22C21C26179.6°179.7°
O22C22C23C24179.9°180.0°
C22O22C27H26180.0°60.0°
C22O22C27H2760.0°179.9°
C22O22C27H2860.0°60.0°
O22C22C23H320.1°0.0°
C27O22C22C21164.9°180.0°
C27O22C22C2315.6°0.0°
O22C27H26H27120.0°120.1°
O22C27H26H28120.0°120.0°
O22C27H27H28120.0°120.0°
C22C21C26C250.2°0.3°
C21C22C23C240.4°0.1°
C22C21C13H246.9°40.0°
C22C21C13H25126.9°160.0°
C22C21C26H29179.8°179.7°
C21C22C23H32179.6°179.9°
C26C21C22C230.1°0.3°
C21C26C25H29180.0°180.0°
C21C26C25C240.2°0.1°
C26C21C13H24173.8°139.7°
C26C21C13H2553.8°19.7°
C21C26C25H30179.8°180.0°
C22C23C24H32180.0°180.0°
C22C23C24C250.3°0.2°
C22C23C24H31179.7°179.9°
C26C25C24C230.0°0.2°
C26C25C24H30180.0°179.9°
C26C25C24H31180.0°179.9°
C23C24C25H31180.0°179.7°
C23C24C25H30180.0°179.7°
C24C25C26H29179.8°180.0°
C25C24C23H32179.7°179.8°
H4C07H5H6120.0°120.1°
H8C08C3'H10177.5°175.6°
H9C08C3'H1062.5°64.4°
H10C3'C2'H1135.1°23.7°
H10C3'C2'H1284.9°146.1°
H10C3'C4'H1737.1°0.1°
H11C2'N1'H1316.5°38.7°
H12C2'N1'H13103.5°161.2°
H13N1'C5'H15126.2°38.8°
H13N1'C5'H166.2°161.1°
H15C5'C4'H17144.9°23.7°
H16C5'C4'H1724.8°146.1°
H18C10C11H2044.4°65.0°
H18C10C11H21164.4°175.0°
H19C10C11H2075.6°55.0°
H19C10C11H2144.5°65.0°
H20C11N12H22152.7°176.1°
H21C11N12H2287.2°64.0°
H22N12C13H2475.6°176.0°
H22N12C13H2544.4°63.9°
H26C27H27H28119.9°120.0°
H29C26C25H300.2°0.0°
H30C25C24H310.0°0.0°
H31C24C23H320.3°0.1°

224931

PDB entries from 2024-09-11

PDB statisticsPDBj update infoContact PDBjnumon