07Y

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
O3	C3	sing	1.43Å	1.41Å
C5	C4	sing	1.53Å	1.49Å
C5	O5	sing	1.43Å	1.42Å
C4	C3	sing	1.55Å	1.55Å
C4	O4	sing	1.45Å	1.45Å
C3	C2	sing	1.54Å	1.51Å
C2	O2	sing	1.43Å	1.51Å
C2	C1	sing	1.54Å	1.50Å
O4	C1	sing	1.45Å	1.46Å
C1	O1	sing	1.43Å	1.42Å
C18	C19	doub	1.38Å	1.38Å	Aromatic
C18	C17	sing	1.39Å	1.39Å	Aromatic
O1	C17	sing	1.36Å	1.34Å
C19	C20	sing	1.38Å	1.40Å	Aromatic
C17	C22	doub	1.39Å	1.40Å	Aromatic
O18	N11	sing	1.22Å	1.44Å
C20	N11	sing	1.48Å	1.32Å
C20	C21	doub	1.38Å	1.40Å	Aromatic
C22	C21	sing	1.38Å	1.38Å	Aromatic
N11	O17	doub	1.22Å	1.42Å
C1	H1	sing	1.09Å	1.10Å
C2	H2	sing	1.09Å	1.10Å
O2	H3	sing	0.97Å	0.95Å
C3	H4	sing	1.09Å	1.10Å
C4	H5	sing	1.09Å	1.10Å
C5	H6	sing	1.09Å	1.10Å
C5	H7	sing	1.09Å	1.10Å
O5	H8	sing	0.97Å	0.95Å
C18	H9	sing	1.08Å	1.08Å
C19	H10	sing	1.08Å	1.08Å
C21	H11	sing	1.08Å	1.08Å
C22	H12	sing	1.08Å	1.08Å
O3	H13	sing	0.97Å	0.95Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
O3	C3	C4	114.0°	110.6°
O3	C3	C2	106.4°	110.5°
O3	C3	H4	113.0°	110.4°
C3	O3	H13	109.5°	114.0°
C4	C5	O5	107.9°	109.4°
C5	C4	C3	117.1°	110.4°
C5	C4	O4	106.8°	110.4°
C5	C4	H5	110.1°	110.5°
C4	C5	H6	109.9°	109.5°
C4	C5	H7	109.9°	109.5°
O5	C5	H6	109.8°	109.5°
O5	C5	H7	109.9°	109.5°
C5	O5	H8	109.5°	114.0°
C3	C4	O4	102.5°	104.9°
C4	C3	C2	100.3°	104.1°
C4	C3	H4	110.9°	110.5°
C3	C4	H5	109.4°	110.3°
C4	O4	C1	105.7°	105.2°
O4	C4	H5	110.7°	110.3°
C3	C2	O2	113.4°	110.5°
C3	C2	C1	102.3°	104.1°
C3	C2	H2	110.2°	110.6°
C2	C3	H4	111.4°	110.5°
O2	C2	C1	109.9°	110.5°
O2	C2	H2	110.3°	110.5°
C2	O2	H3	109.5°	114.0°
C2	C1	O4	108.7°	104.9°
C2	C1	O1	103.0°	110.4°
C2	C1	H1	109.6°	110.4°
C1	C2	H2	110.4°	110.5°
O4	C1	O1	114.4°	110.3°
O4	C1	H1	110.2°	110.3°
C1	O1	C17	116.2°	117.0°
O1	C1	H1	110.7°	110.4°
C19	C18	C17	118.7°	119.9°
C18	C19	C20	119.3°	120.1°
C19	C18	H9	120.6°	120.0°
C18	C19	H10	120.3°	119.9°
C18	C17	O1	120.0°	120.0°
C18	C17	C22	122.4°	119.9°
C17	C18	H9	120.6°	120.0°
O1	C17	C22	117.6°	120.1°
C19	C20	N11	119.0°	119.9°
C19	C20	C21	121.7°	120.1°
C20	C19	H10	120.4°	120.0°
C17	C22	C21	119.3°	119.9°
C17	C22	H12	120.3°	120.0°
O18	N11	C20	119.0°	120.0°
O18	N11	O17	121.9°	120.0°
N11	C20	C21	119.3°	119.9°
C20	N11	O17	119.1°	120.0°
C20	C21	C22	118.6°	120.1°
C20	C21	H11	120.7°	120.0°
C22	C21	H11	120.7°	119.9°
C21	C22	H12	120.4°	120.1°
H6	C5	H7	109.5°	109.5°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
O3	C3	C4	C5	85.1°	98.5°
O3	C3	C4	C2	113.3°	118.7°
O3	C3	C4	H4	128.9°	122.6°
O3	C3	C4	O4	158.5°	142.6°
O3	C3	C2	H4	123.6°	122.6°
O3	C3	C2	O2	85.3°	122.6°
O3	C3	C2	C1	156.4°	118.8°
O3	C3	C2	H2	39.0°	0.1°
O3	C3	C4	H5	41.0°	23.9°
C4	C5	O5	H6	119.7°	120.0°
C4	C5	O5	H7	119.8°	120.0°
C5	C4	C3	O4	116.4°	118.9°
C5	C4	C3	H5	126.1°	122.4°
C5	C4	O4	H5	119.8°	122.3°
C5	C4	C3	C2	161.6°	142.8°
C5	C4	O4	C1	158.4°	159.2°
C5	C4	C3	H4	43.8°	24.2°
C4	C5	H6	H7	120.7°	120.0°
C4	C5	O5	H8	180.0°	180.0°
O5	C5	C4	C3	55.4°	175.0°
O5	C5	C4	O4	58.7°	69.5°
O5	C5	C4	H5	178.9°	52.7°
O5	C5	H6	H7	120.8°	120.0°
C3	C4	O4	H5	116.5°	118.8°
C4	C3	C2	H4	117.4°	118.7°
C4	C3	C2	O2	155.7°	118.6°
C4	C3	C2	C1	37.4°	0.0°
C3	C4	O4	C1	34.8°	40.3°
C4	C3	C2	H2	80.0°	118.7°
C3	C4	C5	H6	64.3°	65.0°
C3	C4	C5	H7	175.2°	55.0°
C4	C3	O3	H13	180.0°	176.2°
O4	C4	C3	C2	45.2°	23.9°
C4	O4	C1	C2	11.0°	40.3°
C4	O4	C1	O1	125.5°	159.3°
C4	O4	C1	H1	109.1°	78.5°
O4	C4	C3	H4	72.6°	94.8°
O4	C4	C5	H6	178.4°	50.5°
O4	C4	C5	H7	61.1°	170.5°
C3	C2	O2	C1	113.9°	114.6°
C3	C2	O2	H2	124.2°	122.7°
C3	C2	C1	H2	117.3°	118.8°
C3	C2	C1	O4	17.8°	23.9°
C3	C2	C1	O1	103.9°	142.8°
C3	C2	C1	H1	138.3°	94.9°
C3	C2	O2	H3	180.0°	176.1°
C2	C3	C4	H5	72.3°	94.8°
C2	C3	O3	H13	70.5°	61.4°
O2	C2	C1	H2	121.9°	122.6°
O2	C2	C1	O4	138.6°	94.7°
O2	C2	C1	O1	16.9°	24.2°
O2	C2	C1	H1	101.0°	146.5°
O2	C2	C3	H4	38.3°	0.0°
C2	C1	O4	O1	114.5°	118.9°
C2	C1	O4	H1	120.1°	118.9°
C2	C1	O1	H1	117.0°	122.3°
C2	C1	O1	C17	123.6°	171.5°
C1	C2	O2	H3	66.2°	61.4°
C1	C2	C3	H4	80.0°	118.6°
O4	C1	O1	H1	125.2°	122.2°
O4	C1	O1	C17	5.8°	73.0°
O4	C1	C2	H2	99.5°	142.7°
C1	O4	C4	H5	81.8°	78.4°
C1	O1	C17	C18	79.5°	180.0°
C1	O1	C17	C22	102.1°	0.1°
O1	C1	C2	H2	138.8°	98.4°
C19	C18	C17	H9	180.0°	179.8°
C19	C18	C17	O1	179.8°	179.9°
C18	C19	C20	H10	180.0°	179.9°
C19	C18	C17	C22	1.6°	0.1°
C18	C19	C20	N11	179.4°	180.0°
C18	C19	C20	C21	0.4°	0.1°
C18	C17	O1	C22	178.3°	179.9°
C17	C18	C19	C20	1.2°	0.0°
C18	C17	C22	C21	1.1°	0.1°
C17	C18	C19	H10	178.8°	179.9°
C18	C17	C22	H12	178.9°	180.0°
O1	C17	C22	C21	179.4°	180.0°
C17	O1	C1	H1	119.4°	49.2°
O1	C17	C18	H9	0.2°	0.2°
O1	C17	C22	H12	0.6°	0.1°
C19	C20	N11	O18	6.5°	180.0°
C19	C20	N11	C21	179.7°	179.9°
C19	C20	C21	C22	0.1°	0.0°
C19	C20	N11	O17	173.8°	0.1°
C20	C19	C18	H9	178.8°	179.8°
C19	C20	C21	H11	179.9°	180.0°
C17	C22	C21	C20	0.2°	0.0°
C17	C22	C21	H12	180.0°	179.9°
C22	C17	C18	H9	178.4°	179.7°
C17	C22	C21	H11	179.8°	180.0°
O18	N11	C20	O17	179.7°	180.0°
O18	N11	C20	C21	173.2°	0.1°
N11	C20	C21	C22	179.9°	180.0°
N11	C20	C19	H10	0.6°	0.1°
N11	C20	C21	H11	0.1°	0.0°
C20	C21	C22	H11	180.0°	180.0°
C21	C20	N11	O17	6.4°	180.0°
C21	C20	C19	H10	179.6°	180.0°
C20	C21	C22	H12	179.8°	180.0°
H1	C1	C2	H2	21.0°	23.9°
H2	C2	O2	H3	55.8°	61.2°
H2	C2	C3	H4	162.6°	122.6°
H4	C3	C4	H5	169.9°	146.5°
H4	C3	O3	H13	52.1°	61.2°
H5	C4	C5	H6	61.4°	172.7°
H5	C4	C5	H7	59.1°	67.3°
H6	C5	O5	H8	60.3°	60.0°
H7	C5	O5	H8	60.2°	60.0°
H9	C18	C19	H10	1.2°	0.3°
H11	C21	C22	H12	0.2°	0.0°

Release date:	2021-11-17
Definition date:	2021-06-07
Last modified:	2021-11-12
Release status:	REL
Processing site:	PDBJ
Derived from:	7EXU