04X
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
C2 | C1 | sing | 1.53Å | 1.48Å | |
C2 | O1 | sing | 1.43Å | 1.37Å | |
C | CA | sing | 1.51Å | 1.55Å | |
C | O | doub | 1.21Å | 1.17Å | |
N1 | C1 | sing | 1.47Å | 1.45Å | |
N1 | C0 | sing | 1.47Å | 1.46Å | |
N1 | C4 | sing | 1.47Å | 1.46Å | |
O1 | C3 | sing | 1.43Å | 1.39Å | |
CA | N | sing | 1.47Å | 1.42Å | |
CA | CB | sing | 1.53Å | 1.46Å | |
N | CE | sing | 1.47Å | 1.42Å | |
C4 | C3 | sing | 1.53Å | 1.51Å | |
CB | CG | sing | 1.50Å | 1.47Å | |
CG | CD | doub | 1.30Å | 1.32Å | |
CD | CE | sing | 1.50Å | 1.52Å | |
CD | C0 | sing | 1.51Å | 1.54Å | |
C2 | H4 | sing | 1.09Å | 1.10Å | |
C2 | H5 | sing | 1.09Å | 1.10Å | |
C1 | H15 | sing | 1.09Å | 1.10Å | |
C1 | H16 | sing | 1.09Å | 1.10Å | |
CA | HA | sing | 1.09Å | 1.10Å | |
C4 | H32 | sing | 1.09Å | 1.10Å | |
C4 | H33 | sing | 1.09Å | 1.10Å | |
CB | H39 | sing | 1.09Å | 1.10Å | |
CB | H40 | sing | 1.09Å | 1.10Å | |
CG | H41 | sing | 1.08Å | 1.08Å | |
CE | H44 | sing | 1.09Å | 1.10Å | |
CE | H45 | sing | 1.09Å | 1.10Å | |
C0 | H55 | sing | 1.09Å | 1.10Å | |
C0 | H56 | sing | 1.09Å | 1.10Å | |
C3 | H63 | sing | 1.09Å | 1.10Å | |
C3 | H64 | sing | 1.09Å | 1.10Å | |
C | OXT | sing | 1.34Å | 1.41Å | |
OXT | HXT | sing | 0.97Å | 0.95Å | |
N | H | sing | 1.01Å | 1.00Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
C1 | C2 | O1 | 104.8° | 109.2° |
C2 | C1 | N1 | 104.0° | 109.3° |
C1 | C2 | H4 | 110.6° | 109.5° |
C1 | C2 | H5 | 110.6° | 109.5° |
C2 | C1 | H15 | 110.8° | 109.5° |
C2 | C1 | H16 | 110.8° | 109.5° |
C2 | O1 | C3 | 118.4° | 113.7° |
O1 | C2 | H4 | 110.6° | 109.5° |
O1 | C2 | H5 | 110.6° | 109.5° |
CA | C | O | 121.0° | 120.0° |
C | CA | N | 99.2° | 109.6° |
C | CA | CB | 112.2° | 109.6° |
C | CA | HA | 108.9° | 109.6° |
CA | C | OXT | 124.7° | 120.0° |
O | C | OXT | 114.4° | 120.0° |
C1 | N1 | C0 | 131.4° | 111.0° |
C1 | N1 | C4 | 119.4° | 110.7° |
N1 | C1 | H15 | 110.8° | 109.5° |
N1 | C1 | H16 | 110.8° | 109.5° |
C0 | N1 | C4 | 109.2° | 111.0° |
N1 | C0 | CD | 109.1° | 109.5° |
N1 | C0 | H55 | 109.6° | 109.5° |
N1 | C0 | H56 | 109.6° | 109.4° |
N1 | C4 | C3 | 106.6° | 109.3° |
N1 | C4 | H32 | 110.2° | 109.5° |
N1 | C4 | H33 | 110.2° | 109.5° |
O1 | C3 | C4 | 110.4° | 109.3° |
O1 | C3 | H63 | 109.2° | 109.5° |
O1 | C3 | H64 | 109.2° | 109.5° |
N | CA | CB | 115.2° | 108.5° |
CA | N | CE | 118.8° | 110.2° |
N | CA | HA | 110.7° | 109.7° |
CA | N | H | 107.1° | 111.0° |
CA | CB | CG | 110.5° | 109.7° |
CB | CA | HA | 110.1° | 109.8° |
CA | CB | H39 | 109.2° | 109.4° |
CA | CB | H40 | 109.2° | 109.4° |
N | CE | CD | 108.9° | 110.3° |
N | CE | H44 | 109.6° | 109.3° |
N | CE | H45 | 109.6° | 109.3° |
CE | N | H | 107.1° | 111.0° |
C3 | C4 | H32 | 110.2° | 109.5° |
C3 | C4 | H33 | 110.2° | 109.5° |
C4 | C3 | H63 | 109.3° | 109.5° |
C4 | C3 | H64 | 109.3° | 109.5° |
CB | CG | CD | 125.4° | 122.9° |
CG | CB | H39 | 109.2° | 109.5° |
CG | CB | H40 | 109.2° | 109.4° |
CB | CG | H41 | 117.3° | 118.6° |
CG | CD | CE | 122.1° | 123.3° |
CG | CD | C0 | 111.5° | 118.4° |
CD | CG | H41 | 117.3° | 118.5° |
CE | CD | C0 | 126.3° | 118.3° |
CD | CE | H44 | 109.6° | 109.3° |
CD | CE | H45 | 109.6° | 109.4° |
CD | C0 | H55 | 109.6° | 109.5° |
CD | C0 | H56 | 109.5° | 109.5° |
H4 | C2 | H5 | 109.5° | 109.6° |
H15 | C1 | H16 | 109.5° | 109.5° |
H32 | C4 | H33 | 109.5° | 109.5° |
H39 | CB | H40 | 109.5° | 109.4° |
H44 | CE | H45 | 109.5° | 109.2° |
H55 | C0 | H56 | 109.5° | 109.5° |
H63 | C3 | H64 | 109.5° | 109.5° |
C | OXT | HXT | 109.5° | 117.1° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
C1 | C2 | O1 | H4 | 119.3° | 119.9° |
C1 | C2 | O1 | H5 | 119.3° | 119.9° |
C2 | C1 | N1 | H15 | 119.1° | 119.9° |
C2 | C1 | N1 | H16 | 119.1° | 119.9° |
C2 | C1 | N1 | C0 | 117.3° | 177.6° |
C2 | C1 | N1 | C4 | 59.4° | 58.6° |
C1 | C2 | O1 | C3 | 68.7° | 58.7° |
C1 | C2 | H4 | H5 | 122.2° | 120.1° |
C2 | C1 | H15 | H16 | 122.5° | 120.1° |
O1 | C2 | C1 | N1 | 61.3° | 56.9° |
C2 | O1 | C3 | C4 | 58.6° | 58.7° |
O1 | C2 | H4 | H5 | 122.1° | 120.1° |
O1 | C2 | C1 | H15 | 179.6° | 63.1° |
O1 | C2 | C1 | H16 | 57.9° | 176.8° |
C2 | O1 | C3 | H63 | 178.8° | 61.3° |
C2 | O1 | C3 | H64 | 61.5° | 178.6° |
CA | C | O | OXT | 178.7° | 180.0° |
C | CA | N | CB | 119.9° | 119.7° |
C | CA | N | HA | 114.4° | 120.4° |
C | CA | CB | HA | 121.5° | 120.5° |
C | CA | N | CE | 65.8° | 171.5° |
C | CA | CB | CG | 77.8° | 168.7° |
C | CA | CB | H39 | 42.4° | 48.6° |
C | CA | CB | H40 | 162.1° | 71.3° |
CA | C | OXT | HXT | 178.7° | 180.0° |
C | CA | N | H | 172.9° | 48.1° |
O | C | CA | N | 144.1° | 20.0° |
O | C | CA | CB | 22.0° | 99.0° |
O | C | CA | HA | 100.1° | 140.4° |
O | C | OXT | HXT | 0.0° | 0.0° |
C1 | N1 | C0 | C4 | 177.0° | 123.6° |
C1 | N1 | C4 | C3 | 48.8° | 58.6° |
C1 | N1 | C0 | CD | 26.7° | 170.0° |
N1 | C1 | C2 | H4 | 179.5° | 63.1° |
N1 | C1 | C2 | H5 | 58.0° | 176.8° |
N1 | C1 | H15 | H16 | 122.5° | 120.1° |
C1 | N1 | C4 | H32 | 168.3° | 61.3° |
C1 | N1 | C4 | H33 | 70.8° | 178.6° |
C1 | N1 | C0 | H55 | 93.3° | 70.0° |
C1 | N1 | C0 | H56 | 146.6° | 50.0° |
C0 | N1 | C4 | C3 | 128.6° | 177.6° |
N1 | C0 | CD | CG | 91.7° | 95.0° |
N1 | C0 | CD | CE | 88.3° | 85.0° |
N1 | C0 | CD | H55 | 120.0° | 120.0° |
N1 | C0 | CD | H56 | 119.9° | 120.0° |
C0 | N1 | C1 | H15 | 1.8° | 62.5° |
C0 | N1 | C1 | H16 | 123.6° | 57.7° |
C0 | N1 | C4 | H32 | 9.0° | 62.4° |
C0 | N1 | C4 | H33 | 111.8° | 57.7° |
N1 | C0 | H55 | H56 | 120.2° | 120.0° |
N1 | C4 | C3 | O1 | 41.5° | 56.9° |
N1 | C4 | C3 | H32 | 119.6° | 119.9° |
N1 | C4 | C3 | H33 | 119.5° | 119.9° |
C4 | N1 | C0 | CD | 150.3° | 66.4° |
C4 | N1 | C1 | H15 | 178.5° | 61.3° |
C4 | N1 | C1 | H16 | 59.7° | 178.6° |
N1 | C4 | H32 | H33 | 121.3° | 120.1° |
C4 | N1 | C0 | H55 | 89.8° | 53.6° |
C4 | N1 | C0 | H56 | 30.3° | 173.6° |
N1 | C4 | C3 | H63 | 161.6° | 63.1° |
N1 | C4 | C3 | H64 | 78.6° | 176.8° |
O1 | C3 | C4 | H63 | 120.2° | 120.0° |
O1 | C3 | C4 | H64 | 120.1° | 119.9° |
C3 | O1 | C2 | H4 | 172.0° | 61.2° |
C3 | O1 | C2 | H5 | 50.5° | 178.6° |
O1 | C3 | C4 | H32 | 161.1° | 63.1° |
O1 | C3 | C4 | H33 | 78.0° | 176.8° |
O1 | C3 | H63 | H64 | 119.6° | 120.1° |
N | CA | CB | HA | 126.0° | 119.8° |
CA | N | CE | H | 121.3° | 123.4° |
N | CA | CB | CG | 34.7° | 49.0° |
CA | N | CE | CD | 40.7° | 50.9° |
N | CA | CB | H39 | 154.9° | 71.1° |
N | CA | CB | H40 | 85.4° | 169.0° |
CA | N | CE | H44 | 160.6° | 69.3° |
CA | N | CE | H45 | 79.2° | 171.2° |
N | CA | C | OXT | 34.4° | 160.0° |
CB | CA | N | CE | 54.2° | 68.8° |
CA | CB | CG | H39 | 120.2° | 120.0° |
CA | CB | CG | H40 | 120.2° | 120.0° |
CA | CB | CG | CD | 10.6° | 16.5° |
CA | CB | H39 | H40 | 119.5° | 119.9° |
CA | CB | CG | H41 | 169.4° | 163.6° |
CB | CA | C | OXT | 156.6° | 81.0° |
CB | CA | N | H | 67.2° | 167.8° |
N | CE | CD | CG | 14.5° | 17.1° |
N | CE | CD | H44 | 119.9° | 120.2° |
N | CE | CD | H45 | 119.9° | 120.3° |
N | CE | CD | C0 | 165.5° | 162.9° |
CE | N | CA | HA | 179.9° | 51.1° |
N | CE | H44 | H45 | 120.3° | 119.6° |
C3 | C4 | H32 | H33 | 121.3° | 120.1° |
C4 | C3 | H63 | H64 | 119.6° | 120.1° |
CB | CG | CD | H41 | 180.0° | 179.9° |
CB | CG | CD | CE | 1.0° | 0.4° |
CB | CG | CD | C0 | 179.0° | 179.6° |
CG | CB | CA | HA | 160.7° | 70.9° |
CG | CB | H39 | H40 | 119.5° | 119.9° |
CG | CD | CE | C0 | 180.0° | 180.0° |
CD | CG | CB | H39 | 130.8° | 103.5° |
CD | CG | CB | H40 | 109.6° | 136.6° |
CG | CD | CE | H44 | 134.4° | 103.1° |
CG | CD | CE | H45 | 105.4° | 137.3° |
CG | CD | C0 | H55 | 148.3° | 25.0° |
CG | CD | C0 | H56 | 28.2° | 145.0° |
CE | CD | CG | H41 | 179.0° | 179.7° |
CD | CE | H44 | H45 | 120.2° | 119.7° |
CE | CD | C0 | H55 | 31.6° | 155.0° |
CE | CD | C0 | H56 | 151.7° | 34.9° |
CD | CE | N | H | 80.7° | 174.3° |
C0 | CD | CG | H41 | 1.0° | 0.3° |
C0 | CD | CE | H44 | 45.6° | 76.9° |
C0 | CD | CE | H45 | 74.6° | 42.7° |
CD | C0 | H55 | H56 | 120.2° | 120.1° |
H4 | C2 | C1 | H15 | 60.4° | 177.0° |
H4 | C2 | C1 | H16 | 61.4° | 56.9° |
H5 | C2 | C1 | H15 | 61.1° | 56.9° |
H5 | C2 | C1 | H16 | 177.1° | 63.3° |
HA | CA | CB | H39 | 79.1° | 169.1° |
HA | CA | CB | H40 | 40.6° | 49.2° |
HA | CA | C | OXT | 81.3° | 39.6° |
HA | CA | N | H | 58.5° | 72.2° |
H32 | C4 | C3 | H63 | 78.8° | 177.0° |
H32 | C4 | C3 | H64 | 40.9° | 56.9° |
H33 | C4 | C3 | H63 | 42.1° | 56.8° |
H33 | C4 | C3 | H64 | 161.8° | 63.3° |
H39 | CB | CG | H41 | 49.2° | 76.4° |
H40 | CB | CG | H41 | 70.5° | 43.6° |
H44 | CE | N | H | 39.3° | 54.0° |
H45 | CE | N | H | 159.5° | 65.4° |