Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

04X

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C2C1sing1.53Å1.48Å
C2O1sing1.43Å1.37Å
CCAsing1.51Å1.55Å
COdoub1.21Å1.17Å
N1C1sing1.47Å1.45Å
N1C0sing1.47Å1.46Å
N1C4sing1.47Å1.46Å
O1C3sing1.43Å1.39Å
CANsing1.47Å1.42Å
CACBsing1.53Å1.46Å
NCEsing1.47Å1.42Å
C4C3sing1.53Å1.51Å
CBCGsing1.50Å1.47Å
CGCDdoub1.30Å1.32Å
CDCEsing1.50Å1.52Å
CDC0sing1.51Å1.54Å
C2H4sing1.09Å1.10Å
C2H5sing1.09Å1.10Å
C1H15sing1.09Å1.10Å
C1H16sing1.09Å1.10Å
CAHAsing1.09Å1.10Å
C4H32sing1.09Å1.10Å
C4H33sing1.09Å1.10Å
CBH39sing1.09Å1.10Å
CBH40sing1.09Å1.10Å
CGH41sing1.08Å1.08Å
CEH44sing1.09Å1.10Å
CEH45sing1.09Å1.10Å
C0H55sing1.09Å1.10Å
C0H56sing1.09Å1.10Å
C3H63sing1.09Å1.10Å
C3H64sing1.09Å1.10Å
COXTsing1.34Å1.41Å
OXTHXTsing0.97Å0.95Å
NHsing1.01Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C1C2O1104.8°109.2°
C2C1N1104.0°109.3°
C1C2H4110.6°109.5°
C1C2H5110.6°109.5°
C2C1H15110.8°109.5°
C2C1H16110.8°109.5°
C2O1C3118.4°113.7°
O1C2H4110.6°109.5°
O1C2H5110.6°109.5°
CACO121.0°120.0°
CCAN99.2°109.6°
CCACB112.2°109.6°
CCAHA108.9°109.6°
CACOXT124.7°120.0°
OCOXT114.4°120.0°
C1N1C0131.4°111.0°
C1N1C4119.4°110.7°
N1C1H15110.8°109.5°
N1C1H16110.8°109.5°
C0N1C4109.2°111.0°
N1C0CD109.1°109.5°
N1C0H55109.6°109.5°
N1C0H56109.6°109.4°
N1C4C3106.6°109.3°
N1C4H32110.2°109.5°
N1C4H33110.2°109.5°
O1C3C4110.4°109.3°
O1C3H63109.2°109.5°
O1C3H64109.2°109.5°
NCACB115.2°108.5°
CANCE118.8°110.2°
NCAHA110.7°109.7°
CANH107.1°111.0°
CACBCG110.5°109.7°
CBCAHA110.1°109.8°
CACBH39109.2°109.4°
CACBH40109.2°109.4°
NCECD108.9°110.3°
NCEH44109.6°109.3°
NCEH45109.6°109.3°
CENH107.1°111.0°
C3C4H32110.2°109.5°
C3C4H33110.2°109.5°
C4C3H63109.3°109.5°
C4C3H64109.3°109.5°
CBCGCD125.4°122.9°
CGCBH39109.2°109.5°
CGCBH40109.2°109.4°
CBCGH41117.3°118.6°
CGCDCE122.1°123.3°
CGCDC0111.5°118.4°
CDCGH41117.3°118.5°
CECDC0126.3°118.3°
CDCEH44109.6°109.3°
CDCEH45109.6°109.4°
CDC0H55109.6°109.5°
CDC0H56109.5°109.5°
H4C2H5109.5°109.6°
H15C1H16109.5°109.5°
H32C4H33109.5°109.5°
H39CBH40109.5°109.4°
H44CEH45109.5°109.2°
H55C0H56109.5°109.5°
H63C3H64109.5°109.5°
COXTHXT109.5°117.1°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C1C2O1H4119.3°119.9°
C1C2O1H5119.3°119.9°
C2C1N1H15119.1°119.9°
C2C1N1H16119.1°119.9°
C2C1N1C0117.3°177.6°
C2C1N1C459.4°58.6°
C1C2O1C368.7°58.7°
C1C2H4H5122.2°120.1°
C2C1H15H16122.5°120.1°
O1C2C1N161.3°56.9°
C2O1C3C458.6°58.7°
O1C2H4H5122.1°120.1°
O1C2C1H15179.6°63.1°
O1C2C1H1657.9°176.8°
C2O1C3H63178.8°61.3°
C2O1C3H6461.5°178.6°
CACOOXT178.7°180.0°
CCANCB119.9°119.7°
CCANHA114.4°120.4°
CCACBHA121.5°120.5°
CCANCE65.8°171.5°
CCACBCG77.8°168.7°
CCACBH3942.4°48.6°
CCACBH40162.1°71.3°
CACOXTHXT178.7°180.0°
CCANH172.9°48.1°
OCCAN144.1°20.0°
OCCACB22.0°99.0°
OCCAHA100.1°140.4°
OCOXTHXT0.0°0.0°
C1N1C0C4177.0°123.6°
C1N1C4C348.8°58.6°
C1N1C0CD26.7°170.0°
N1C1C2H4179.5°63.1°
N1C1C2H558.0°176.8°
N1C1H15H16122.5°120.1°
C1N1C4H32168.3°61.3°
C1N1C4H3370.8°178.6°
C1N1C0H5593.3°70.0°
C1N1C0H56146.6°50.0°
C0N1C4C3128.6°177.6°
N1C0CDCG91.7°95.0°
N1C0CDCE88.3°85.0°
N1C0CDH55120.0°120.0°
N1C0CDH56119.9°120.0°
C0N1C1H151.8°62.5°
C0N1C1H16123.6°57.7°
C0N1C4H329.0°62.4°
C0N1C4H33111.8°57.7°
N1C0H55H56120.2°120.0°
N1C4C3O141.5°56.9°
N1C4C3H32119.6°119.9°
N1C4C3H33119.5°119.9°
C4N1C0CD150.3°66.4°
C4N1C1H15178.5°61.3°
C4N1C1H1659.7°178.6°
N1C4H32H33121.3°120.1°
C4N1C0H5589.8°53.6°
C4N1C0H5630.3°173.6°
N1C4C3H63161.6°63.1°
N1C4C3H6478.6°176.8°
O1C3C4H63120.2°120.0°
O1C3C4H64120.1°119.9°
C3O1C2H4172.0°61.2°
C3O1C2H550.5°178.6°
O1C3C4H32161.1°63.1°
O1C3C4H3378.0°176.8°
O1C3H63H64119.6°120.1°
NCACBHA126.0°119.8°
CANCEH121.3°123.4°
NCACBCG34.7°49.0°
CANCECD40.7°50.9°
NCACBH39154.9°71.1°
NCACBH4085.4°169.0°
CANCEH44160.6°69.3°
CANCEH4579.2°171.2°
NCACOXT34.4°160.0°
CBCANCE54.2°68.8°
CACBCGH39120.2°120.0°
CACBCGH40120.2°120.0°
CACBCGCD10.6°16.5°
CACBH39H40119.5°119.9°
CACBCGH41169.4°163.6°
CBCACOXT156.6°81.0°
CBCANH67.2°167.8°
NCECDCG14.5°17.1°
NCECDH44119.9°120.2°
NCECDH45119.9°120.3°
NCECDC0165.5°162.9°
CENCAHA179.9°51.1°
NCEH44H45120.3°119.6°
C3C4H32H33121.3°120.1°
C4C3H63H64119.6°120.1°
CBCGCDH41180.0°179.9°
CBCGCDCE1.0°0.4°
CBCGCDC0179.0°179.6°
CGCBCAHA160.7°70.9°
CGCBH39H40119.5°119.9°
CGCDCEC0180.0°180.0°
CDCGCBH39130.8°103.5°
CDCGCBH40109.6°136.6°
CGCDCEH44134.4°103.1°
CGCDCEH45105.4°137.3°
CGCDC0H55148.3°25.0°
CGCDC0H5628.2°145.0°
CECDCGH41179.0°179.7°
CDCEH44H45120.2°119.7°
CECDC0H5531.6°155.0°
CECDC0H56151.7°34.9°
CDCENH80.7°174.3°
C0CDCGH411.0°0.3°
C0CDCEH4445.6°76.9°
C0CDCEH4574.6°42.7°
CDC0H55H56120.2°120.1°
H4C2C1H1560.4°177.0°
H4C2C1H1661.4°56.9°
H5C2C1H1561.1°56.9°
H5C2C1H16177.1°63.3°
HACACBH3979.1°169.1°
HACACBH4040.6°49.2°
HACACOXT81.3°39.6°
HACANH58.5°72.2°
H32C4C3H6378.8°177.0°
H32C4C3H6440.9°56.9°
H33C4C3H6342.1°56.8°
H33C4C3H64161.8°63.3°
H39CBCGH4149.2°76.4°
H40CBCGH4170.5°43.6°
H44CENH39.3°54.0°
H45CENH159.5°65.4°

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon