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01G

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O3GPGdoub1.48Å1.58Å
O1GPGsing1.61Å1.48Å
PGO3Bsing1.61Å1.69Å
PGO2Gsing1.61Å1.57Å
O3BPBsing1.61Å1.57Å
O1BPBdoub1.48Å1.48Å
PBO2Bsing1.61Å1.49Å
PBO3Asing1.61Å1.59Å
O3APAsing1.61Å1.61Å
O1APAdoub1.48Å1.49Å
PAO5'sing1.61Å1.58Å
PAO2Asing1.61Å1.50Å
C5'O5'sing1.43Å1.39Å
C5'C4'sing1.53Å1.54Å
C4'O4'sing1.44Å1.47Å
C4'C3'sing1.54Å1.48Å
O4'C1'sing1.44Å1.51Å
O3'C3'sing1.43Å1.41Å
C3'C2'sing1.55Å1.55Å
CACCAAsing1.53Å1.48Å
CACOAFsing1.43Å1.41Å
CAANAEsing1.47Å1.42Å
C1'C2'sing1.55Å1.50Å
C1'N9sing1.46Å1.42Å
C2'O2'sing1.43Å1.44Å
OAFCADsing1.43Å1.43Å
N9C8sing1.37Å1.38ÅAromatic
N9C4sing1.37Å1.33ÅAromatic
NAEC8sing1.38Å1.31Å
NAECABsing1.47Å1.49Å
C8N7doub1.31Å1.33ÅAromatic
N3C4sing1.34Å1.36Å
N3C2doub1.31Å1.32Å
C4C5doub1.40Å1.39ÅAromatic
N7C5sing1.36Å1.35ÅAromatic
CADCABsing1.53Å1.53Å
N2C2sing1.37Å1.35Å
C2N1sing1.36Å1.33Å
C5C6sing1.41Å1.38Å
N1C6sing1.35Å1.35Å
C6O6doub1.22Å1.26Å
CAAHAA1sing1.09Å1.10Å
CAAHAA2sing1.09Å1.10Å
CACHAC1sing1.09Å1.10Å
CACHAC2sing1.09Å1.10Å
CADHAD1sing1.09Å1.10Å
CADHAD2sing1.09Å1.10Å
CABHAB1sing1.09Å1.10Å
CABHAB2sing1.09Å1.10Å
N1HN1sing0.97Å1.00Å
N2HN21sing0.97Å1.00Å
N2HN22sing0.97Å1.00Å
C1'H1'sing1.09Å1.10Å
C2'H2'sing1.09Å1.10Å
O2'HO2'sing0.97Å0.95Å
C3'H3'sing1.09Å1.10Å
O3'HO3'sing0.97Å0.95Å
C4'H4'sing1.09Å1.10Å
C5'H5'1sing1.09Å1.10Å
C5'H5'2sing1.09Å1.10Å
O2AHO2Asing0.97Å0.95Å
O2BHO2Bsing0.97Å0.95Å
O2GHO2Gsing0.97Å0.95Å
O1GHO1Gsing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O3GPGO1G115.6°109.5°
O3GPGO3B106.2°109.5°
O3GPGO2G111.6°109.5°
O1GPGO3B101.2°109.4°
O1GPGO2G118.0°109.4°
PGO1GHO1G109.5°114.0°
O3BPGO2G101.7°109.5°
PGO3BPB133.9°134.0°
PGO2GHO2G109.5°114.0°
O3BPBO1B108.8°109.5°
O3BPBO2B110.7°109.5°
O3BPBO3A100.9°109.5°
O1BPBO2B115.4°109.4°
O1BPBO3A110.8°109.5°
O2BPBO3A109.3°109.5°
PBO2BHO2B109.5°114.0°
PBO3APA124.8°134.0°
O3APAO1A109.6°109.5°
O3APAO5'102.6°109.5°
O3APAO2A108.2°109.5°
O1APAO5'111.3°109.5°
O1APAO2A116.5°109.5°
O5'PAO2A107.7°109.5°
PAO5'C5'120.2°123.0°
PAO2AHO2A109.5°114.0°
O5'C5'C4'110.4°109.5°
O5'C5'H5'1109.2°109.5°
O5'C5'H5'2108.9°109.5°
C5'C4'O4'106.6°109.8°
C5'C4'C3'113.7°109.9°
C5'C4'H4'106.6°110.0°
C4'C5'H5'1109.1°109.5°
C4'C5'H5'2109.0°109.5°
O4'C4'C3'102.7°107.3°
C4'O4'C1'106.8°107.0°
O4'C4'H4'117.1°109.9°
C4'C3'O3'111.6°110.6°
C4'C3'C2'103.8°104.2°
C4'C3'H3'112.9°110.5°
C3'C4'H4'110.3°109.9°
O4'C1'C2'105.2°103.5°
O4'C1'N9106.2°110.6°
O4'C1'H1'118.8°110.7°
O3'C3'C2'112.5°110.5°
O3'C3'H3'104.2°110.4°
C3'O3'HO3'109.5°114.0°
C3'C2'C1'105.3°102.1°
C3'C2'O2'114.1°110.9°
C3'C2'H2'109.0°111.0°
C2'C3'H3'112.0°110.5°
CAACACOAF114.3°109.2°
CACCAANAE110.1°109.3°
CACCAAHAA1109.3°109.5°
CACCAAHAA2109.1°109.5°
CAACACHAC1107.9°109.5°
CAACACHAC2106.8°109.5°
CACOAFCAD111.3°113.8°
OAFCACHAC1107.9°109.5°
OAFCACHAC2106.8°109.5°
CAANAEC8118.2°111.0°
CAANAECAB117.4°110.8°
NAECAAHAA1109.3°109.5°
NAECAAHAA2109.1°109.5°
C2'C1'N9120.3°110.6°
C1'C2'O2'108.8°110.9°
C2'C1'H1'104.2°110.7°
C1'C2'H2'114.3°110.9°
C1'N9C8131.7°126.3°
C1'N9C4122.8°126.2°
N9C1'H1'103.1°110.5°
O2'C2'H2'105.5°110.8°
C2'O2'HO2'109.5°114.0°
OAFCADCAB111.7°109.2°
OAFCADHAD1108.7°109.5°
OAFCADHAD2108.2°109.5°
C8N9C4105.4°107.5°
N9C8NAE132.2°125.2°
N9C8N7111.8°109.6°
N9C4N3129.2°134.0°
N9C4C5108.2°106.3°
C8NAECAB119.0°111.0°
NAEC8N7116.0°125.2°
NAECABCAD114.1°109.3°
NAECABHAB1107.9°109.5°
NAECABHAB2106.9°109.5°
C8N7C5105.6°109.2°
C4N3C2117.3°121.1°
N3C4C5122.6°119.7°
N3C2N2121.4°119.1°
N3C2N1121.4°121.9°
C4C5N7109.0°107.4°
C4C5C6118.0°118.6°
N7C5C6132.9°134.0°
CABCADHAD1108.7°109.5°
CABCADHAD2108.2°109.5°
CADCABHAB1108.0°109.5°
CADCABHAB2106.9°109.5°
N2C2N1117.2°119.0°
C2N2HN21110.9°120.0°
C2N2HN22124.6°120.0°
C2N1C6124.4°120.3°
C2N1HN1117.8°119.9°
C5C6N1116.2°118.4°
C5C6O6123.6°120.8°
N1C6O6120.0°120.8°
C6N1HN1117.8°119.9°
HAA1CAAHAA2109.9°109.5°
HAC1CACHAC2113.3°109.6°
HAD1CADHAD2111.2°109.5°
HAB1CABHAB2113.2°109.5°
HN21N2HN22124.6°120.0°
H5'1C5'H5'2110.2°109.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O3GPGO1GO3B114.3°120.0°
O3GPGO1GO2G135.9°120.1°
O3GPGO3BO2G116.9°120.1°
O3GPGO3BPB87.7°45.0°
O3GPGO2GHO2G165.9°180.0°
O3GPGO1GHO1G3.6°60.0°
O1GPGO3BO2G122.0°119.9°
O1GPGO3BPB151.2°165.0°
O1GPGO2GHO2G56.6°59.9°
PGO3BPBO1B147.0°39.9°
PGO3BPBO2B19.3°80.0°
PGO3BPBO3A96.4°160.0°
O3BPGO2GHO2G53.0°60.0°
O3BPGO1GHO1G117.8°180.0°
O2GPGO3BPB29.2°75.1°
O2GPGO1GHO1G132.3°60.1°
O3BPBO1BO2B125.0°120.0°
O3BPBO1BO3A110.0°120.0°
O3BPBO2BO3A110.2°120.0°
O3BPBO3APA170.5°165.0°
O3BPBO2BHO2B131.1°60.0°
O1BPBO2BO3A125.7°120.0°
O1BPBO3APA74.4°45.0°
O1BPBO2BHO2B104.9°180.0°
O2BPBO3APA53.9°75.0°
PBO3APAO1A33.6°40.0°
PBO3APAO5'152.0°160.0°
PBO3APAO2A94.3°80.0°
O3APBO2BHO2B20.8°60.0°
O3APAO1AO5'112.8°120.0°
O3APAO1AO2A123.2°120.0°
O3APAO5'O2A114.0°120.0°
O3APAO5'C5'83.8°175.0°
O3APAO2AHO2A138.5°59.9°
O1APAO5'O2A128.8°120.0°
O1APAO5'C5'33.4°55.0°
O1APAO2AHO2A97.6°180.0°
PAO5'C5'C4'122.2°180.0°
PAO5'C5'H5'1117.8°60.0°
PAO5'C5'H5'22.6°60.0°
O5'PAO2AHO2A28.2°60.0°
O2APAO5'C5'162.2°65.0°
O5'C5'C4'H5'1120.0°120.0°
O5'C5'C4'H5'2119.6°120.0°
O5'C5'C4'O4'56.7°66.5°
O5'C5'C4'C3'55.6°175.7°
O5'C5'C4'H4'177.5°54.6°
O5'C5'H5'1H5'2119.6°120.0°
C5'C4'O4'C3'119.8°119.4°
C5'C4'O4'H4'119.2°121.1°
C5'C4'C3'H4'119.8°121.2°
C5'C4'O4'C1'157.8°146.0°
C5'C4'C3'O3'84.3°119.8°
C5'C4'C3'C2'154.3°121.4°
C5'C4'C3'H3'32.8°2.8°
C4'C5'H5'1H5'2119.6°120.0°
O4'C4'C3'H4'125.5°119.4°
O4'C4'C3'O3'161.0°120.8°
O4'C4'C3'C2'39.5°2.0°
C4'O4'C1'C2'20.6°40.1°
C4'O4'C1'N9149.2°158.6°
C4'O4'C1'H1'95.4°78.5°
O4'C4'C3'H3'82.0°116.6°
O4'C4'C5'H5'1176.7°173.5°
O4'C4'C5'H5'262.9°53.6°
C3'C4'O4'C1'37.9°26.5°
C4'C3'O3'C2'116.2°114.9°
C4'C3'O3'H3'122.2°122.6°
C4'C3'C2'H3'122.1°118.6°
C4'C3'C2'C1'27.2°20.9°
C4'C3'C2'O2'92.0°139.1°
C4'C3'C2'H2'150.3°97.3°
C4'C3'O3'HO3'44.0°176.3°
C3'C4'C5'H5'164.3°55.7°
C3'C4'C5'H5'2175.3°64.3°
O4'C1'C2'C3'4.2°37.1°
O4'C1'C2'N9119.6°118.5°
O4'C1'C2'H1'125.6°118.6°
O4'C1'N9H1'125.6°123.0°
O4'C1'C2'O2'118.6°155.2°
O4'C1'N9C885.6°140.6°
O4'C1'N9C499.0°39.5°
O4'C1'C2'H2'123.8°81.2°
C1'O4'C4'H4'83.0°92.9°
O3'C3'C2'H3'117.1°122.5°
O3'C3'C2'C1'148.0°97.9°
O3'C3'C2'O2'28.8°20.2°
O3'C3'C2'H2'88.9°143.9°
O3'C3'C4'H4'35.4°1.4°
C3'C2'C1'O2'122.7°118.1°
C3'C2'C1'H2'119.6°118.3°
C3'C2'C1'N9115.5°155.6°
C3'C2'O2'H2'119.7°123.7°
C3'C2'C1'H1'129.8°81.6°
C3'C2'O2'HO2'19.0°67.4°
C2'C3'O3'HO3'160.2°61.5°
C2'C3'C4'H4'86.0°117.4°
CAACACOAFHAC1120.0°120.0°
CAACACOAFHAC2117.9°119.9°
CACCAANAEHAA1120.0°119.9°
CACCAANAEHAA2119.8°119.9°
CAACACOAFCAD62.5°58.6°
CACCAANAEC8164.3°177.6°
CACCAANAECAB41.9°58.6°
CACCAAHAA1HAA2119.7°120.1°
CAACACHAC1HAC2118.0°120.1°
OAFCACCAANAE55.3°56.8°
CACOAFCADCAB53.0°58.7°
OAFCACCAAHAA1175.4°176.8°
OAFCACCAAHAA264.4°63.2°
OAFCACHAC1HAC2118.0°120.1°
CACOAFCADHAD1173.0°178.6°
CACOAFCADHAD266.0°61.3°
CAANAEC8N973.7°120.0°
CAANAEC8CAB153.4°123.6°
CAANAEC8N7107.6°60.2°
CAANAECABCAD36.6°58.6°
NAECAAHAA1HAA2119.7°120.1°
NAECAACACHAC1175.3°176.8°
NAECAACACHAC262.5°63.1°
CAANAECABHAB1156.6°61.3°
CAANAECABHAB281.4°178.6°
C2'C1'N9H1'115.3°122.9°
C1'C2'O2'H2'123.1°123.6°
C2'C1'N9C833.5°105.3°
C2'C1'N9C4141.9°74.6°
C1'C2'O2'HO2'98.2°180.0°
C1'C2'C3'H3'94.9°139.6°
N9C1'C2'O2'121.8°86.3°
C1'N9C8C4176.0°179.9°
C1'N9C8NAE1.9°0.1°
C1'N9C8N7176.9°179.7°
C1'N9C4N31.9°0.0°
C1'N9C4C5178.2°179.7°
N9C1'C2'H2'4.2°37.3°
O2'C2'C1'H1'7.1°36.6°
O2'C2'C3'H3'145.8°102.3°
OAFCADCABNAE40.3°56.9°
OAFCADCABHAD1120.0°120.0°
OAFCADCABHAD2119.1°119.9°
CADOAFCACHAC1177.5°178.6°
CADOAFCACHAC255.4°61.2°
OAFCADHAD1HAD2119.1°120.1°
OAFCADCABHAB1160.3°63.1°
OAFCADCABHAB277.6°176.8°
N9C8NAEN7178.7°179.8°
N9C8NAECAB132.9°116.3°
C8N9C4N3178.4°180.0°
C8N9C4C51.8°0.4°
N9C8N7C50.4°0.2°
C8N9C1'H1'148.8°17.6°
C4N9C8NAE177.9°179.9°
C4N9C8N70.8°0.4°
N9C4N3C5179.9°179.6°
N9C4N3C2179.0°179.7°
N9C4C5N72.1°0.3°
N9C4C5C6178.1°179.7°
C4N9C1'H1'26.6°162.5°
NAEC8N7C5179.4°180.0°
C8NAECABCAD169.9°177.6°
C8NAECAAHAA144.3°57.7°
C8NAECAAHAA275.9°62.5°
C8NAECABHAB149.9°62.5°
C8NAECABHAB272.2°57.6°
CABNAEC8N745.8°63.4°
NAECABCADHAB1120.0°119.9°
NAECABCADHAB2118.0°120.0°
CABNAECAAHAA1161.9°178.5°
CABNAECAAHAA277.9°61.3°
NAECABCADHAD1160.3°176.8°
NAECABCADHAD278.7°63.1°
NAECABHAB1HAB2118.1°120.1°
C8N7C5C41.5°0.1°
C8N7C5C6176.7°180.0°
N3C4C5N7178.0°180.0°
C4N3C2N2179.0°180.0°
C4N3C2N10.6°0.1°
N3C4C5C62.0°0.0°
C2N3C4C51.1°0.1°
N3C2N2N1178.5°180.0°
N3C2N1C61.0°0.0°
N3C2N1HN1179.0°180.0°
N3C2N2HN21180.0°180.0°
N3C2N2HN220.0°0.0°
C4C5N7C6175.1°180.0°
C4C5C6N12.3°0.0°
C4C5C6O6177.8°180.0°
N7C5C6N1177.1°180.0°
N7C5C6O67.4°0.0°
CABCADHAD1HAD2119.1°120.1°
CADCABHAB1HAB2118.1°120.1°
N2C2N1C6179.5°180.0°
N2C2N1HN10.5°0.0°
C2N2HN21HN22180.0°180.0°
C2N1C6C51.9°0.0°
C2N1C6HN1180.0°180.0°
C2N1C6O6177.6°180.0°
N1C2N2HN211.5°0.0°
N1C2N2HN22178.5°179.9°
C5C6N1O6175.7°180.0°
C5C6N1HN1178.1°180.0°
O6C6N1HN12.4°0.1°
HAA1CAACACHAC164.7°63.3°
HAA1CAACACHAC257.5°56.9°
HAA2CAACACHAC155.6°56.8°
HAA2CAACACHAC2177.7°177.0°
HAD1CADCABHAB179.7°56.9°
HAD1CADCABHAB242.4°63.2°
HAD2CADCABHAB141.2°177.0°
HAD2CADCABHAB2163.3°56.9°
H1'C1'C2'H2'110.6°160.1°
H2'C2'O2'HO2'138.7°56.4°
H2'C2'C3'H3'28.1°21.4°
H3'C3'O3'HO3'78.2°61.1°
H3'C3'C4'H4'152.5°123.9°
H4'C4'C5'H5'157.5°65.4°
H4'C4'C5'H5'262.9°174.6°

226262

PDB entries from 2024-10-16

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