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PRD_002555

Summary
Name:Paenilamicin B2
Formula:C42 H86 N16 O13
Fomular weight:1023.232
Component type:peptide-like
Polymer sequences:YF5, DAL, YFQ, ORD, YFZ, YFQ, GLY, SPD
Non-polymer components:
BIRD class:Antimicrobial
Represented as:polymer
Compound Details:A complex secondary metabolite produced by the honey bee brood pathogen Paenibacillus larvae
Description:Nonribosomally synthesized peptide-polyketide hybrid

ProgramVersionName
OpenEye OEToolkits2.0.7(2~{R},3~{S},5~{S},6~{R})-6-azanyl-~{N}-[(2~{R})-1-[[(2~{S})-1-[[(2~{R})-5-azanyl-1-[[(2~{S},3~{S},5~{S})-7-[[(2~{S})-1-[[2-[4-(3-azanylpropylamino)butylamino]-2-oxidanylidene-ethyl]amino]-3-(methylamino)-1-oxidanylidene-propan-2-yl]amino]-1,3,5-tris(oxidanyl)-7-oxidanylidene-heptan-2-yl]amino]-1-oxidanylidene-pentan-2-yl]amino]-3-(methylamino)-1-oxidanylidene-propan-2-yl]amino]-1-oxidanylidene-propan-2-yl]-9-carbamimidamido-2,3,5-tris(oxidanyl)nonanamide

Chemical Descriptors

TypeProgramVersionDescriptor
SMILES_CANONICALCACTVS3.385CNC[C@H](NC(=O)C[C@@H](O)C[C@H](O)[C@H](CO)NC(=O)[C@@H](CCCN)NC(=O)[C@H](CNC)NC(=O)[C@@H](C)NC(=O)[C@H](O)[C@@H](O)C[C@H](O)[C@H](N)CCCNC(N)=N)C(=O)NCC(=O)NCCCCNCCCN
SMILESCACTVS3.385CNC[CH](NC(=O)C[CH](O)C[CH](O)[CH](CO)NC(=O)[CH](CCCN)NC(=O)[CH](CNC)NC(=O)[CH](C)NC(=O)[CH](O)[CH](O)C[CH](O)[CH](N)CCCNC(N)=N)C(=O)NCC(=O)NCCCCNCCCN
SMILES_CANONICALOpenEye OEToolkits2.0.7C[C@H](C(=O)N[C@@H](CNC)C(=O)N[C@H](CCCN)C(=O)N[C@@H](CO)[C@H](C[C@@H](CC(=O)N[C@@H](CNC)C(=O)NCC(=O)NCCCCNCCCN)O)O)NC(=O)[C@@H]([C@H](C[C@@H]([C@@H](CCCNC(=N)N)N)O)O)O
SMILESOpenEye OEToolkits2.0.7CC(C(=O)NC(CNC)C(=O)NC(CCCN)C(=O)NC(CO)C(CC(CC(=O)NC(CNC)C(=O)NCC(=O)NCCCCNCCCN)O)O)NC(=O)C(C(CC(C(CCCNC(=N)N)N)O)O)O

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PDB entries from 2026-01-14

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